BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0526800 Os04g0526800|AK061581
(233 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223 191 3e-49
AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220 188 2e-48
AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211 184 3e-47
AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281 184 3e-47
AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273 151 3e-37
AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234 134 4e-32
AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260 133 8e-32
AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300 126 1e-29
AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226 90 8e-19
>AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223
Length = 222
Score = 191 bits (484), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 47 LSHPSPYTSFGYKHSSKGQVIHWVSKLSRR------AQGFREHVTLGPKLSETVKGKLSL 100
L P+ + F SSK V + +R G R+ + PKL+ETVK KLSL
Sbjct: 24 LPDPASFNKFRVPASSKKSEQSNVKSILKRKKTDGFTNGVRDQSKIRPKLTETVKRKLSL 83
Query: 101 GAKILQAGGIERVFRKAFSAEKGERLVKALQCYLYTTGGPIAGMLFVSTKKVAFRSDRPV 160
GA+ILQ GG+E++F++ F +GE+L K QCYL TT GPIAG+LF+S+KK+AF S+R +
Sbjct: 84 GARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSI 143
Query: 161 TVTSAKGDVARVPYKVVVPLRRIAQVRPSENADKPEEKYIHVVTVDGFEFWFMGFVSYQR 220
V S +GD+ RV YKV +PL +I +V S+N KP +KY+ VVTVDGF+FWFMGF+SYQ+
Sbjct: 144 KVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQK 203
Query: 221 SCKYMQQAIS 230
+ +++A+S
Sbjct: 204 AFNCLEKALS 213
>AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220
Length = 219
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 122/170 (71%)
Query: 61 SSKGQVIHWVSKLSRRAQGFREHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSA 120
+ KG+ + K G R+ LGPKL+ETVK KLSLGA+ILQ GG+E+++++ F
Sbjct: 45 TGKGKSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKV 104
Query: 121 EKGERLVKALQCYLYTTGGPIAGMLFVSTKKVAFRSDRPVTVTSAKGDVARVPYKVVVPL 180
E+L KA QCYL TT GPIAG+LF+S+KK+AF S+R + V S +G++ RV YKV +PL
Sbjct: 105 SDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPL 164
Query: 181 RRIAQVRPSENADKPEEKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQAIS 230
+I V S+N KP +KY+ VVTVDGF+FWFMGF+SYQ++ ++QA+S
Sbjct: 165 CKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214
>AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211
Length = 210
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 116/155 (74%)
Query: 77 AQGFREHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSAEKGERLVKALQCYLYT 136
G R+ LGPKL+ETVK KLSLGAKILQ GG+E+++++ F E+L KA QCYL T
Sbjct: 53 TNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLST 112
Query: 137 TGGPIAGMLFVSTKKVAFRSDRPVTVTSAKGDVARVPYKVVVPLRRIAQVRPSENADKPE 196
T G IAG+LF+S+KK+AF S+R + VTS +GD+ RV YKV +PL +I V S+N KP
Sbjct: 113 TEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPS 172
Query: 197 EKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQAISE 231
++Y+ VVTVD ++FWFMGFVSYQ++ +++A++E
Sbjct: 173 QRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNE 207
>AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281
Length = 280
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 126/184 (68%)
Query: 48 SHPSPYTSFGYKHSSKGQVIHWVSKLSRRAQGFREHVTLGPKLSETVKGKLSLGAKILQA 107
+H P +S + KG+ + K G R+ LGPKL+ETVK KLSLGAKILQ
Sbjct: 94 NHQIPTSSKVSYLTGKGKSMLRKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQM 153
Query: 108 GGIERVFRKAFSAEKGERLVKALQCYLYTTGGPIAGMLFVSTKKVAFRSDRPVTVTSAKG 167
GG+E+++++ F E+L KA QCYL TT GPIAG+LF+S+KK+AF S+R + V S +G
Sbjct: 154 GGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQG 213
Query: 168 DVARVPYKVVVPLRRIAQVRPSENADKPEEKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQ 227
++RV YKV +PL +I V S+N KP +KY+ +VT+D F+FWFMGFVSYQ++ +++
Sbjct: 214 VLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEK 273
Query: 228 AISE 231
A++
Sbjct: 274 ALNN 277
>AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273
Length = 272
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 101/165 (61%)
Query: 69 WVSKLSRRAQGFREHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSAEKGERLVK 128
W K A+ ++ GP +SET GK++L AK + GG E +FR+ F E E L K
Sbjct: 100 WSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKK 159
Query: 129 ALQCYLYTTGGPIAGMLFVSTKKVAFRSDRPVTVTSAKGDVARVPYKVVVPLRRIAQVRP 188
CYL TT GP+AG +++S +VAF SDRP+ T+ G + Y+VVVPL +A V P
Sbjct: 160 TFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNP 219
Query: 189 SENADKPEEKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQAISELQ 233
+ P EKYI + TVDG +FWFMGFV+Y+++ ++ ++S+ Q
Sbjct: 220 VVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQ 264
>AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234
Length = 233
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 103/165 (62%), Gaps = 5/165 (3%)
Query: 70 VSKLSRRAQ----GFREHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSAEKGER 125
V +R+A+ G ++H+ P +S+ +LS G K++ GG ERVF++ F E+
Sbjct: 60 VEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEK 119
Query: 126 LVKALQCYLYTTGGPIAGMLFVSTKKVAFRSDRPVTV-TSAKGDVARVPYKVVVPLRRIA 184
L+ + CY+ TT GP+ G++++S +++AF SD + + +SA G+ YKVV+ +I+
Sbjct: 120 LLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKIS 179
Query: 185 QVRPSENADKPEEKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQAI 229
+ S N KP E+Y+H+VT DGFEFWFMGFVSY + + +A+
Sbjct: 180 SISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 224
>AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260
Length = 259
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Query: 72 KLSRRAQGFREHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSAEKGERLVKALQ 131
K A F +H+ GP +++ +++ G KIL GG E+VF++ F E+L+K
Sbjct: 98 KAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYA 157
Query: 132 CYLYTTGGPIAGMLFVSTKKVAFRSDRPVTVTSAKGDVARVPYKVVVPLRRIAQVRPSEN 191
CYL T+ GP+ G++++ST K+AF SD P++ + + YKVV+P ++ V PS +
Sbjct: 158 CYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQTLWSY-YKVVLPANQLKAVNPSTS 216
Query: 192 ADKPEEKYIHVVTVDGFEFWFMGFVSYQRSCKYMQQAI 229
+KYI V+++D EFWFMGFV+Y+ + K +Q+A+
Sbjct: 217 RVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAV 254
>AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300
Length = 299
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
Query: 82 EHVTLGPKLSETVKGKLSLGAKILQAGGIERVFRKAFSAEKGERLVKALQCYLYTTGGPI 141
+H+ P ++ G+++ K+ GG E++FR+ F + E+L+ + CYL T+ GP+
Sbjct: 145 QHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPV 204
Query: 142 AGMLFVSTKKVAFRSDRPVTVTSAKGDVARVP-YKVVVPLRRIAQVRPSENADKPEEKYI 200
G+L++S+ K+A+ SD P++ + GD YKVV+PL ++ V PS + P EKYI
Sbjct: 205 MGVLYISSAKLAYCSDNPLSYKN--GDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYI 262
Query: 201 HVVTVDGFEFWFMGFVSYQRSCKYMQQAI 229
V++VD EFWFMGF++Y + +Q ++
Sbjct: 263 QVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
>AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226
Length = 225
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 29/134 (21%)
Query: 96 GKLSLGAKILQAGGIERVFRKAFSAEKGERLVKALQCYLYTTGGPIAGMLFVSTKKVAFR 155
G+++ K+L GG E++FR+ F E+L + CYL T+ GP+ G+L+
Sbjct: 112 GRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLY--------- 162
Query: 156 SDRPVTVTSAKGDVARVPYKVVVPLRRIAQVRPSENADKPEEKYIHVVTVDGFEFWFMGF 215
VV+PL ++ V PS + P EKYI V++VD EFWFMGF
Sbjct: 163 --------------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGF 202
Query: 216 VSYQRSCKYMQQAI 229
++Y+ + +Q +
Sbjct: 203 LNYEGAVTSLQDTL 216
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,729,635
Number of extensions: 181619
Number of successful extensions: 416
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 413
Number of HSP's successfully gapped: 9
Length of query: 233
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 138
Effective length of database: 8,502,049
Effective search space: 1173282762
Effective search space used: 1173282762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)