BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0518800 Os04g0518800|AK069293
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 331 2e-91
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 320 5e-88
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 312 1e-85
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 305 2e-83
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 285 2e-77
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 277 3e-75
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 256 7e-69
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 229 8e-61
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 154 6e-38
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 331 bits (849), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/209 (75%), Positives = 176/209 (84%)
Query: 23 LQSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNG 82
++S+F+RICVFCGSS G K SY+DAA+ELG ELV+RNID SQAV+NG
Sbjct: 3 IESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNG 62
Query: 83 GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLE 142
GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMA+ SDAFIALPGGYGTLEELLE
Sbjct: 63 GRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLE 122
Query: 143 VIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKL 202
VI WAQLGIHDKPVGLLNV+GYYNSLLSFIDKAVEE FISP+ARHIIV AP+ KEL++KL
Sbjct: 123 VITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKL 182
Query: 203 EAYSPRHDKVVPKMQWEMEKMSYCKSCEI 231
E Y PRH+KV K WEME++ +CEI
Sbjct: 183 EDYVPRHEKVASKKSWEMEQIGLSPTCEI 211
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 320 bits (820), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 154/202 (76%), Positives = 170/202 (84%)
Query: 24 QSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNGG 83
+S+F RICVFCGSSQGKK SYQDAAV+LG ELV RNID SQAV++GG
Sbjct: 10 KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGG 69
Query: 84 RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 143
RHVIGVIPKTLMPRE+TGETVGEV+AVADMHQRKAEMAR SDAFIALPGGYGTLEELLEV
Sbjct: 70 RHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 129
Query: 144 IAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLE 203
I WAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEE FIS +AR II+ APT KEL++KLE
Sbjct: 130 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLE 189
Query: 204 AYSPRHDKVVPKMQWEMEKMSY 225
YSP H+ V K+ WE+E++ Y
Sbjct: 190 EYSPCHESVATKLCWEIERIDY 211
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/233 (66%), Positives = 177/233 (75%), Gaps = 24/233 (10%)
Query: 17 VEAMALLQSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXS 76
++ ++ +S+FRRICVFCGSSQGKK SYQDAAV+LG ELV+RNID S
Sbjct: 3 IKGESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVS 62
Query: 77 QAVYNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALP----- 131
QAV++GGRHVIG+IPKTLMPRE+TGETVGEV+AVADMHQRKAEMA+ SDAFIALP
Sbjct: 63 QAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNL 122
Query: 132 -------------------GGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFI 172
GYGTLEELLEVI WAQLGIHDKPVGLLNVDGYYNSLLSFI
Sbjct: 123 VKLKNMLSWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFI 182
Query: 173 DKAVEEEFISPSARHIIVLAPTPKELLEKLEAYSPRHDKVVPKMQWEMEKMSY 225
DKAVEE FISP+AR IIV APT KEL++KLE Y+P H++V K+ WEME++ Y
Sbjct: 183 DKAVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGY 235
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 305 bits (780), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Query: 24 QSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNGG 83
+SRF+RICVFCGSS GKK SYQ+AA++LG ELV R ID SQAV++GG
Sbjct: 5 KSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGG 64
Query: 84 RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 143
RHV+GVIPKTLMPREITGET+GEVKAVADMHQRKAEMARQ+DAFIALPGGYGTLEELLEV
Sbjct: 65 RHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEV 124
Query: 144 IAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLE 203
I WAQLGIH KPVGLLNVDGYYNSLL+FIDKAV+E FISP AR IIV AP KEL+ +LE
Sbjct: 125 ITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184
Query: 204 AYSPRHDKVVPKMQW-EMEKMSYCKSCEI 231
Y P D++ K+ W E++++SY E+
Sbjct: 185 EYEPEFDEITSKLVWDEVDRISYVPGSEV 213
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 160/203 (78%)
Query: 20 MALLQSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAV 79
M +++SRF+R+CVFCGSS GK++ Y DAA +L +ELV R ++ SQAV
Sbjct: 1 MEIVKSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAV 60
Query: 80 YNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEE 139
+ G HV+G+IP+TLM +EITGET GEV AVADMH+RKAEMAR SD FIALPGGYGTLEE
Sbjct: 61 HEAGGHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEE 120
Query: 140 LLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELL 199
LLEVIAWAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++ FI PS RHI V AP KEL+
Sbjct: 121 LLEVIAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELV 180
Query: 200 EKLEAYSPRHDKVVPKMQWEMEK 222
+KLEAY P +D V+ K +WE+EK
Sbjct: 181 QKLEAYKPVNDGVIAKSRWEVEK 203
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 277 bits (709), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 153/196 (78%)
Query: 24 QSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNGG 83
+SRFRRICVFCGSS G K +Y DAA++L +LV RNID SQAV++GG
Sbjct: 5 KSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGG 64
Query: 84 RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 143
RHV+G+IPK+L PREITGE++GEV V+ MHQRKAEM RQ+DAFIALPGGYGT EELLEV
Sbjct: 65 RHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEV 124
Query: 144 IAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLE 203
I W+QLGIH KPVGLLNVDG+Y+SLL+FIDKAV+E F+S +AR IIV AP +LL+ LE
Sbjct: 125 ITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLLE 184
Query: 204 AYSPRHDKVVPKMQWE 219
Y P+HD V KM W+
Sbjct: 185 EYVPKHDDFVSKMVWD 200
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 256 bits (654), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 150/201 (74%)
Query: 24 QSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNGG 83
+SRFR+ICVFCGS G ++ + DAA+ELG ELV R ID S+ VY GG
Sbjct: 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGG 65
Query: 84 RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEV 143
HV+G+IPK LMP EI+GETVG+V+ VADMH+RKA MA++++AFIALPGGYGT+EELLE+
Sbjct: 66 LHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEM 125
Query: 144 IAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLE 203
I W+QLGIH K VGLLNVDGYYN+LL+ D VEE FI P AR+I+V APT KEL+EK+E
Sbjct: 126 ITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKME 185
Query: 204 AYSPRHDKVVPKMQWEMEKMS 224
Y+P H V W++E++
Sbjct: 186 EYTPSHMHVASHESWKVEELG 206
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 140/202 (69%), Gaps = 17/202 (8%)
Query: 25 SRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDXXXXXXXXXXXXXXSQAVYNGGR 84
SRF+ ICVFCGSS G K SYQDAA++L KELV R ID SQAV++GGR
Sbjct: 16 SRFKSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGR 75
Query: 85 --------------HVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIAL 130
H + V + ++TGETVGEVK VADMHQRKA MA+ SDAFI L
Sbjct: 76 HNNNNNGNDDALFCHSVNV---SQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITL 132
Query: 131 PGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIV 190
PGGYGTLEELLEVI WAQLGIHDKPVGLLNVDGYY++LL FIDKAVEE FI P+ARHIIV
Sbjct: 133 PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIV 192
Query: 191 LAPTPKELLEKLEAYSPRHDKV 212
APT +EL KLE D++
Sbjct: 193 SAPTARELFIKLELNMVSLDRI 214
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 96/126 (76%), Gaps = 1/126 (0%)
Query: 99 ITGETVGEVKAVADMHQRKAEMARQSDAFIALPG-GYGTLEELLEVIAWAQLGIHDKPVG 157
I+GETVGEV+ V+DMH+RKA MA+++ AFIAL G Y T+EELLE+I WAQLGIH K VG
Sbjct: 6 ISGETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKTVG 65
Query: 158 LLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLEAYSPRHDKVVPKMQ 217
LLNVDGYYN+LL+F D VEE FI A +I+V AP+ +EL+EK+E Y+P H +
Sbjct: 66 LLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYTPSHKYIASHQS 125
Query: 218 WEMEKM 223
W++E +
Sbjct: 126 WKVEPL 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,165,018
Number of extensions: 205755
Number of successful extensions: 459
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 456
Number of HSP's successfully gapped: 9
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)