BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0517300 Os04g0517300|AK069879
(438 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31190.1 | chr2:13291458-13293681 REVERSE LENGTH=434 584 e-167
AT5G49820.1 | chr5:20246753-20249432 REVERSE LENGTH=498 154 6e-38
AT3G45890.1 | chr3:16871697-16874100 FORWARD LENGTH=609 144 8e-35
AT1G13770.1 | chr1:4721717-4724345 FORWARD LENGTH=441 141 9e-34
AT5G01510.1 | chr5:201702-205151 FORWARD LENGTH=510 121 6e-28
AT2G23470.1 | chr2:9999105-10001398 REVERSE LENGTH=521 98 8e-21
>AT2G31190.1 | chr2:13291458-13293681 REVERSE LENGTH=434
Length = 433
Score = 584 bits (1506), Expect = e-167, Method: Compositional matrix adjust.
Identities = 273/408 (66%), Positives = 334/408 (81%), Gaps = 1/408 (0%)
Query: 23 PEPWVEISESISRLCSFDA-GRVSVKVIQDSRPIHDKMIDSFLNKFFPSGYPYSVNEGYL 81
P W E S+S+S F + G +S+KV+ D+RP+ KM++SFLNKFFPSGYPYSVNEGYL
Sbjct: 26 PVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQKMVESFLNKFFPSGYPYSVNEGYL 85
Query: 82 TYTKFRALQHFSSAMLHVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHAGKLICSGMG 141
YT+FRALQHFSSA L VLSTQSLLFAAGLRPTPAQAT VSWILKDGMQH GKLICS +G
Sbjct: 86 RYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKLICSNLG 145
Query: 142 ARMDSEPKSWRILADVLYDFGTALEVISPLCPQLFLEVAGFGNFAKGMAVVAARATRLPI 201
ARMDSEPK WRILADVLYD GT LE++SPLCP LFLE+AG GNFAKGMA VAARATRLPI
Sbjct: 146 ARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAGLGNFAKGMATVAARATRLPI 205
Query: 202 YSSFAKEGNLSDLFAKGEAISTLFNVMGIGAGIGLASTVCSTTQGKLIAGPLLSVVHIYG 261
YSSFAKEGNLSD+FAKGEAISTLFNV GIGAGI LAST+CS+ +GKL+ G +LSVVH+Y
Sbjct: 206 YSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLASTICSSMEGKLVVGSILSVVHVYS 265
Query: 262 VVQEMRATPVNTLNPQRTAMIVADFIKSGKVSSPAELRYREDLLFPNRLIEEAGSVKIGQ 321
VV++MR P+NTLNPQRTA+IVA+F+K+GKV SP +LR++EDL+FP R I++AG+VK+G+
Sbjct: 266 VVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLRFQEDLMFPERPIQDAGNVKVGR 325
Query: 322 PVRRVLSPQRIEQLKATFSKEKFLLSRKDNSAYMVLEQSATGEDALRGWLVAAFASEMER 381
+ + + P +++LK F +EKFLLS + MVLE ATGEDALRGWLVAA+ M +
Sbjct: 326 ALHKAVKPSEVQRLKQVFVEEKFLLSHGKSWTDMVLEHDATGEDALRGWLVAAYVKSMTK 385
Query: 382 SGVGSGDTVLNVAYERMENVFPMFVAEVKSRGWYTDQFLDGNRSRIAY 429
D +L AY++M +VF F+++V+++GWYTD+FLDG +R A+
Sbjct: 386 IYNDPDDIILQDAYDKMNDVFNPFLSQVQAKGWYTDRFLDGTGTRFAW 433
>AT5G49820.1 | chr5:20246753-20249432 REVERSE LENGTH=498
Length = 497
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 198/402 (49%), Gaps = 45/402 (11%)
Query: 60 IDSFLNKFF-PSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRPTPAQA 118
+ SFL + P G+P SVNE Y+ Y +RAL+HF + V +TQ+LL + G + +
Sbjct: 104 VGSFLRSYVVPEGFPGSVNESYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGASRNSSAS 163
Query: 119 TA--VSWILKDGMQHAGKLICSGMGARMDSEPKSWRILADVLYDFGTALEVISPLCPQLF 176
A ++WILKDG GK++ + G + D + K R D+L + G +E+ + P LF
Sbjct: 164 AAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLF 223
Query: 177 LEVAGFGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVMGIGAGIGL 236
L +A N K +A V + +TR PIY +FAK N+ D+ AKGE + + ++MG G I +
Sbjct: 224 LPLACAANVVKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLMGTGFSILI 283
Query: 237 ASTVCS--TTQGKLIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVADFIKSGKVSS 294
+ S TT G L G L+S QE+R+ ++TLN R + V F+K+G+V S
Sbjct: 284 SKRNPSLVTTFGLLSCGYLMS------SYQEVRSVVLHTLNRARFTVAVESFLKTGRVPS 337
Query: 295 PAELRYREDLL-FPNRLIEEAGSVKIGQPVRRVL-SPQRIEQLKATFSKEKFLL--SRKD 350
E +E + FP + V +G + P +K F KE++++ S
Sbjct: 338 LQEGNIQEKIFTFP---WVDDRPVMLGARFKDAFQDPSTYMAVKPFFDKERYMVTYSPTK 394
Query: 351 NSAYMVLEQSATGEDALRGWLVAAFASE-----MERSGVGSGDTV--LNVAY-------- 395
Y +L+ A +D L+ AAF + M +S G+ +V L+ A+
Sbjct: 395 GKVYALLKHQANSDDILK----AAFHAHVLLHFMNQSKDGNPRSVEQLDPAFAPTEYELE 450
Query: 396 -------ERMENVFPMFVAEVKSRGW-YTDQFLDGNRSRIAY 429
E + + +F + +GW ++ L+ R+R+ +
Sbjct: 451 SRIAESCEMVSTSYGVFKSRAAEQGWRMSESLLNPGRARLCH 492
>AT3G45890.1 | chr3:16871697-16874100 FORWARD LENGTH=609
Length = 608
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 194/392 (49%), Gaps = 38/392 (9%)
Query: 62 SFLNKFF-PSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGL-RPTPAQAT 119
+ L +F P G+P SV YL Y+ +R +Q +S + VL+TQSLL+A GL + A
Sbjct: 192 NLLTQFLLPEGFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLGKGAIPTAA 251
Query: 120 AVSWILKDGMQHAGKLICSGMGARMDSEPKSWRILADVLYDFGTALEVISPLCPQLFLEV 179
A++W+LKDG+ + K++ S G D PK WR+ AD+L + +E+++P+ PQ F+ +
Sbjct: 252 AINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMI 311
Query: 180 AGFGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVMGIGAGIGLAST 239
+ A + ATR + FA + N +++ AKGEA + +GI GI +A+
Sbjct: 312 GAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANC 371
Query: 240 VCSTTQGKLIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVADFIKSGKVSSPAELR 299
+ ++T L A +++ +H+Y ++ + + TLNP R +++ ++++ SG+ E+
Sbjct: 372 IGTSTSLALAAFGVVTTIHMYTNLKSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVN 431
Query: 300 YREDLL---------FPNRL---------------IEEAGSVKIGQPVRRVL-SPQRIEQ 334
E L P +L IEE +++G + V+ + +
Sbjct: 432 DEEPLFPTVRFSNMKSPEKLQDFVLSSEAKAAAADIEE--RLQLGSKLSDVIHNKEEAIA 489
Query: 335 LKATFSKEKFLLSRKDNSAYMVLEQSATGEDALRGWLVAAFASEMER-SGVGSGDTV--- 390
L + E ++L+ ++L++S+T +D LR + +E+ +G+ T
Sbjct: 490 LFDLYRNEGYILTEHKGRFCVMLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDC 549
Query: 391 -----LNVAYERMENVFPMFVAEVKSRGWYTD 417
L+++ + + F + +S GW T+
Sbjct: 550 KPGGRLHISLDYVRREFEHAKEDSESVGWVTE 581
>AT1G13770.1 | chr1:4721717-4724345 FORWARD LENGTH=441
Length = 440
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 195/390 (50%), Gaps = 26/390 (6%)
Query: 49 IQDSRPIHDKMIDSFLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFA 108
IQ S + + L F P G+P SV Y+ + + LQ S+ +LSTQ+LL A
Sbjct: 39 IQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMMLSTQALLSA 98
Query: 109 AGLRPTPAQATAVS--WILKD--GMQHAGKLICSGMGARMDSEPKSWRILADVLYDFGTA 164
G+ A + W L+D GM G L G+ +DS K WR++AD++ D G
Sbjct: 99 IGVGEKSATVIGATFQWFLRDFTGML-GGILFTFYQGSNLDSNAKMWRLVADLMNDIGML 157
Query: 165 LEVISPLCPQLFLEVAGFGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTL 224
++++SPL P F+ V G+ ++ VA+ ATR + FA + N +D+ AK + T+
Sbjct: 158 MDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETM 217
Query: 225 FNVMGIGAGIGLASTVCSTTQGKLIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVA 284
+MG+ G+ LA ++ L+V H+Y + +R +N+LN +R+++++
Sbjct: 218 ATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLT 277
Query: 285 DFIKSGKVSSPAELRYREDLL-FPNRLIEEAGSVKIGQPVR---RVLSPQRIEQLK---- 336
FI++G+V SP ++ E +L + S + + V+ RV S R++ L+
Sbjct: 278 HFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNG 337
Query: 337 ---ATFSKEKFLLSRKDNSAYMVLEQSATGEDALRGWLVA-AFASEMERSG--VGSGDTV 390
+++ K+LL+ + ++L + + D L+ ++ A A+ ME+S G+
Sbjct: 338 VGASSYKNAKYLLAHIKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEAW 397
Query: 391 LNVAYERMENVFPMFVAEVKSRGWYTDQFL 420
++ Y+ + + +++S GW T++ L
Sbjct: 398 IDKHYDEL-------LHKLRSGGWKTERLL 420
>AT5G01510.1 | chr5:201702-205151 FORWARD LENGTH=510
Length = 509
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 175/374 (46%), Gaps = 33/374 (8%)
Query: 68 FPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGL---------RPTPAQA 118
FPSG+P SV++ YL Y ++ + + + +VL T SLL A G+ A A
Sbjct: 120 FPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGVGSFSGTSAAATAAASA 179
Query: 119 TAVSWILKDGMQHAGKLICSG-MGARMDSEPKSWRILADVLYDFGTALEVISPLCPQLFL 177
A+ W+ KDG+ G+L+ G G+ D +PK WR+ AD + G+ ++ + L P FL
Sbjct: 180 AAIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRMYADFIGSAGSFFDLATQLYPSQFL 239
Query: 178 EVAGFGNFAKGMAVVAARATRLP----IYSSFAKEGNLSDLFAKGEAISTLFNVMGIGAG 233
+A GN AK + AR R P I + FA GNL ++ AK E ++G+G G
Sbjct: 240 LLASTGNLAKAV----ARGLRDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFG 295
Query: 234 IGLAST--VCSTTQGKLIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVADFIKSGK 291
I + T + + L+ + +VH++ Q + NT+N +R +IV +
Sbjct: 296 ILIIDTPGLVKSFPFVLLTWTSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSV 355
Query: 292 VSSPAELRYREDLLFPNRLIEEAGSVKIGQPVRRV----LSPQRIEQLKATFSKEKFLLS 347
V + RE++L R ++ + G + + S +++ L ++KEK++L+
Sbjct: 356 VPGYVDCNKRENILLWQRFMKP--RIIFGVSLEELSGLEKSVSKVKALLKMYTKEKYILT 413
Query: 348 ----RKDNSAYMVLEQSATGEDALRGWLVAAFASEMERSGVGSGDTV---LNVAYERMEN 400
KD + + +AT D LR A + E D+V L + M+N
Sbjct: 414 LNKLNKDTEFSVSFKVNATSRDVLRCLWQAYWLEENMEESFKDKDSVFHWLKQSLSEMDN 473
Query: 401 VFPMFVAEVKSRGW 414
F F+ ++ + GW
Sbjct: 474 KFDDFLFKLDTAGW 487
>AT2G23470.1 | chr2:9999105-10001398 REVERSE LENGTH=521
Length = 520
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 129/256 (50%), Gaps = 8/256 (3%)
Query: 73 PYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGL--RPTPAQATAVSWILKDGMQ 130
P V++ Y++Y K++ L S+ L VL+TQ++ A G+ + A + A +WILKDG+
Sbjct: 125 PKQVSDNYISYVKWKFLHRVFSSALQVLATQAMFRAIGIGQSRSLASSAAFNWILKDGLG 184
Query: 131 HAGKLI-CSGMGARMDSEPKSWRILADVLYDFGTALEVISPLCPQLFLEVAGFGNFAKGM 189
+ I + + + D+ K R VL+ +E+++P+ PQ FL +A N AK +
Sbjct: 185 RLSRCIYTASLASAFDTNLKRVRFSTSVLFSLSIGVELMTPVFPQYFLLLASIANIAKQI 244
Query: 190 AVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVMGIGAGIGLASTVCSTTQGK-- 247
++ AT ++ SFA NL ++ AK + + F+ +G+ + L + +
Sbjct: 245 SLSCYLATGSAVHRSFAVADNLGEVSAKAQIQTVCFDNLGLLLAVLLNMLFQHNQRLQAC 304
Query: 248 --LIAGPLLSVVHIYGVVQEMRATPVNTLNPQRTAMIVADFIKSGKVSSPAELRYREDL- 304
+ P+ S + G+ Q ++ + TL R +I+ +I+ +V SPAE+ E +
Sbjct: 305 LPFVLYPIFSTFDLLGIYQGLKHINLQTLTKDRLEIILERWIEFRQVPSPAEVSEEEGIG 364
Query: 305 LFPNRLIEEAGSVKIG 320
L +R + ++IG
Sbjct: 365 LLGSRGSKRVWPIRIG 380
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,092,226
Number of extensions: 370621
Number of successful extensions: 829
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 819
Number of HSP's successfully gapped: 6
Length of query: 438
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 336
Effective length of database: 8,310,137
Effective search space: 2792206032
Effective search space used: 2792206032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)