BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0510900 Os04g0510900|AK063625
(310 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26740.1 | chr4:13473791-13475278 REVERSE LENGTH=246 309 1e-84
AT5G55240.1 | chr5:22405963-22407158 FORWARD LENGTH=244 294 3e-80
AT2G33380.1 | chr2:14144984-14146374 REVERSE LENGTH=237 285 2e-77
AT5G29560.1 | chr5:11190543-11191963 REVERSE LENGTH=221 252 2e-67
AT1G23240.1 | chr1:8252894-8254494 REVERSE LENGTH=211 173 9e-44
AT1G70670.1 | chr1:26644830-26645970 FORWARD LENGTH=196 172 2e-43
AT1G70680.1 | chr1:26647341-26648541 FORWARD LENGTH=193 162 2e-40
AT1G23250.1 | chr1:8255233-8256770 REVERSE LENGTH=206 105 4e-23
>AT4G26740.1 | chr4:13473791-13475278 REVERSE LENGTH=246
Length = 245
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/224 (64%), Positives = 175/224 (78%), Gaps = 2/224 (0%)
Query: 77 KDSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVL 136
+D++ VA +PVT R R DL++ +PKPY+ RAL APD LSVL
Sbjct: 10 RDAMATVAPYAPVTYHRRARVDLDDRLPKPYMPRALQAPD--REHPYGTPGHKNYGLSVL 67
Query: 137 QQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFP 196
QQHV+FFD DDNGIIYPWETY G R LGFN+I S +IA V+N+++SY TLPGWLPSPFFP
Sbjct: 68 QQHVSFFDIDDNGIIYPWETYSGLRMLGFNIIGSLIIAAVINLTLSYATLPGWLPSPFFP 127
Query: 197 IYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVL 256
IYIHNIH+SKHGSDS TYDNEGRFMPVN E IFSKYA+T PD+L+ E+W+MTEGNR+
Sbjct: 128 IYIHNIHKSKHGSDSKTYDNEGRFMPVNLELIFSKYAKTLPDKLSLGELWEMTEGNRDAW 187
Query: 257 DLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVA 300
D+FGW A K+EW +LY+LARDEEG+L++EAIRR +DGSLFEY A
Sbjct: 188 DIFGWIAGKIEWGLLYLLARDEEGFLSKEAIRRCFDGSLFEYCA 231
>AT5G55240.1 | chr5:22405963-22407158 FORWARD LENGTH=244
Length = 243
Score = 294 bits (753), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 137/224 (61%), Positives = 171/224 (76%), Gaps = 2/224 (0%)
Query: 77 KDSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVL 136
+D++ VA + VT R VRGDL++ +PKPYL RAL APD+ LSVL
Sbjct: 9 RDAMETVAPYARVTYHRRVRGDLDDTLPKPYLPRALQAPDM--EHPQGTPDHRHNGLSVL 66
Query: 137 QQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFP 196
QQHVAFFD D+NGIIYP+ET+ G R LGFN++ S ++A +N+++SY TLPGWLPSPFFP
Sbjct: 67 QQHVAFFDLDNNGIIYPFETFSGFRLLGFNLLASLILAAGINIALSYATLPGWLPSPFFP 126
Query: 197 IYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVL 256
IYIHNIH++KHGSDS TYDNEGR+ P N E +FSKYART PD+L+ E+W MTEGNR+
Sbjct: 127 IYIHNIHKAKHGSDSKTYDNEGRYTPANLELMFSKYARTIPDKLSLGELWDMTEGNRDAF 186
Query: 257 DLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVA 300
D FGW A+K+EW +LY LA DEEG+L++EAIRR +DGSLFEY A
Sbjct: 187 DFFGWLASKVEWGVLYALASDEEGFLSKEAIRRCFDGSLFEYCA 230
>AT2G33380.1 | chr2:14144984-14146374 REVERSE LENGTH=237
Length = 236
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 171/231 (74%), Gaps = 2/231 (0%)
Query: 78 DSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVLQ 137
++L A +PVT +R VR DLEE +PKPY+ARALAAPD +SV+Q
Sbjct: 6 EALATTAPLAPVTSQRKVRNDLEETLPKPYMARALAAPDT--EHPNGTEGHDSKGMSVMQ 63
Query: 138 QHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPI 197
QHVAFFD++D+GI+YPWETY+G R LGFN I S L++N++ SY TLP W+PSP P+
Sbjct: 64 QHVAFFDQNDDGIVYPWETYKGFRDLGFNPISSIFWTLLINLAFSYVTLPSWVPSPLLPV 123
Query: 198 YIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLD 257
YI NIH++KHGSDS TYD EGR++PVN ENIFSKYA T D+L+++EVW +TEGNR +D
Sbjct: 124 YIDNIHKAKHGSDSSTYDTEGRYVPVNLENIFSKYALTVKDKLSFKEVWNVTEGNRMAID 183
Query: 258 LFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQREQHAK 308
FGW + K+EW +LY+LA+DE+G+L++EA+R +DGSLFE +A +R K
Sbjct: 184 PFGWLSNKVEWILLYILAKDEDGFLSKEAVRGCFDGSLFEQIAKERANSRK 234
>AT5G29560.1 | chr5:11190543-11191963 REVERSE LENGTH=221
Length = 220
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 158/231 (68%), Gaps = 21/231 (9%)
Query: 78 DSLTIVALQSPVTVERPVRGDLEEHVPKPYLARALAAPDIYXXXXXXXXXXXXXXLSVLQ 137
DS+ VA ++PVT ER VR DL++ +PKPY+ RA+ APD+ +SVLQ
Sbjct: 9 DSIATVAEKAPVTAERRVRTDLDDRLPKPYVPRAMVAPDM--ENVNGTRGHKHRDMSVLQ 66
Query: 138 QHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPI 197
QH+AFFD+D +GIIYP ET+ G RALGFN++ S + ++V+++MSY TLP W+PSP FPI
Sbjct: 67 QHIAFFDQDGDGIIYPSETFRGFRALGFNLVSSIFLTIIVHLTMSYATLPTWMPSPTFPI 126
Query: 198 YIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLD 257
YI NIHR+KHGSD+ TYD EGR++P N EN+FSKYART PD+LT
Sbjct: 127 YIKNIHRAKHGSDTSTYDTEGRYIPANLENMFSKYARTVPDKLTLA-------------- 172
Query: 258 LFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQREQHAK 308
A+K+EW +LY LA+DE G+L++EA+RR +DGSLF+Y A R K
Sbjct: 173 -----ASKMEWGVLYFLAKDENGHLSKEAVRRCFDGSLFDYCAKARASTKK 218
>AT1G23240.1 | chr1:8252894-8254494 REVERSE LENGTH=211
Length = 210
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 113/164 (68%)
Query: 133 LSVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPS 192
++ L++HV+FFDR+ +G +YPWETY+G RALG +++ +A+ +N+ +S T PG S
Sbjct: 27 MTALEKHVSFFDRNKDGTVYPWETYQGFRALGTGRLLAAFVAIFINMGLSKKTRPGKGFS 86
Query: 193 PFFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGN 252
P FPI + N H HGSD+ YD++GRF+ FE IF+K+ART D LT E+ +M + N
Sbjct: 87 PLFPIDVKNSHLCMHGSDTDVYDDDGRFVESKFEEIFNKHARTHKDALTAEEIQKMLKTN 146
Query: 253 REVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLF 296
R+ D+ GW + EW IL+ LA+D+ G L+ +++R +YDGSLF
Sbjct: 147 RDPFDITGWLSDYGEWKILHTLAQDKNGLLSEKSVRAIYDGSLF 190
>AT1G70670.1 | chr1:26644830-26645970 FORWARD LENGTH=196
Length = 195
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 114/170 (67%)
Query: 134 SVLQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSP 193
+ LQ+HVAFFDR+ +GI+YP ET++G RA+G ++S + ++ +N+ +S T PG S
Sbjct: 17 NFLQRHVAFFDRNKDGIVYPSETFQGFRAIGCGYLLSAVASVFINIGLSSKTRPGKGFSI 76
Query: 194 FFPIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNR 253
+FPI + NIH +KHGSDSG YD +GRF+ FE IF+K+A T D LT E+ Q+ + N+
Sbjct: 77 WFPIEVKNIHLAKHGSDSGVYDKDGRFVASKFEEIFTKHAHTHRDALTNEELKQLLKANK 136
Query: 254 EVLDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQR 303
E D GW A EW +L+ L +D+ G L ++ +R YDGSLFE + QR
Sbjct: 137 EPNDRKGWLAGYTEWKVLHYLCKDKNGLLHKDTVRAAYDGSLFEKLEKQR 186
>AT1G70680.1 | chr1:26647341-26648541 FORWARD LENGTH=193
Length = 192
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 109/168 (64%)
Query: 136 LQQHVAFFDRDDNGIIYPWETYEGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFF 195
LQ+HVAFFDR+ +GI+YP ET++G RA+G ++S A+ +N+S+S T PG S F
Sbjct: 20 LQKHVAFFDRNKDGIVYPSETFQGFRAIGCGYLLSTFAAVFINISLSSKTRPGKGFSFSF 79
Query: 196 PIYIHNIHRSKHGSDSGTYDNEGRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREV 255
PI + N+ H SDSG YD +GRF+ FE IF+K+A T D LT +E+ ++ + NRE
Sbjct: 80 PIEVKNVRLGIHSSDSGVYDKDGRFVASKFEEIFAKHAHTHRDALTSKELKELLKANREP 139
Query: 256 LDLFGWFAAKLEWTILYVLARDEEGYLAREAIRRMYDGSLFEYVAMQR 303
D G A EW +LY L +D+ G L +E +R +YDGSLFE + QR
Sbjct: 140 NDCKGGILAFGEWKVLYNLCKDKSGLLHKEIVRAVYDGSLFEQLEKQR 187
>AT1G23250.1 | chr1:8255233-8256770 REVERSE LENGTH=206
Length = 205
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
Query: 158 EGCRALGFNMIMSFLIALVVNVSMSYPTLPGWLPSPFFPIYIHNIHRSKHGSDSGTYDNE 217
+G RALG MS +A+ N+ +S T P L P+++ + +D YD +
Sbjct: 50 KGFRALGTGRFMSAFVAVFFNMGLSQKTRPVQLFGYILPLFLKPFVCTVVTTD--VYDKD 107
Query: 218 GRFMPVNFENIFSKYARTSPDRLTYREVWQMTEGNREVLDLFGWFAAKLEWTILYVLARD 277
GRF+ FE IF+K+ART D LT +E+ QM + NRE D GW + +EW IL+ LA+D
Sbjct: 108 GRFVESKFEEIFNKHARTHKDALTAKEIKQMLKTNREPYDFIGWLSDFIEWKILHTLAQD 167
Query: 278 EEGYLAREAIRRMYDGSLFE 297
G L +A+R +YDGSLF+
Sbjct: 168 -NGLLTEDAVRGVYDGSLFQ 186
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,989,926
Number of extensions: 226067
Number of successful extensions: 447
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 440
Number of HSP's successfully gapped: 8
Length of query: 310
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 212
Effective length of database: 8,419,801
Effective search space: 1784997812
Effective search space used: 1784997812
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)