BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0501700 Os04g0501700|AK103837
(711 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17410.2 | chr5:5730651-5736415 FORWARD LENGTH=680 869 0.0
AT5G06680.1 | chr5:2056741-2059369 FORWARD LENGTH=839 132 7e-31
AT3G53760.1 | chr3:19918182-19922264 REVERSE LENGTH=746 76 5e-14
AT1G80260.1 | chr1:30175924-30180511 FORWARD LENGTH=996 61 2e-09
AT1G20570.1 | chr1:7122018-7126559 REVERSE LENGTH=977 56 5e-08
>AT5G17410.2 | chr5:5730651-5736415 FORWARD LENGTH=680
Length = 679
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/704 (63%), Positives = 515/704 (73%), Gaps = 38/704 (5%)
Query: 5 PATPRWNLERPYLTGRFHQEXXXXXXXXXXGSKPYSLDSFSRXXXXXXXAESVIGSYAVS 64
P TPRWN +RP+LTGRFHQE SK ++LDS S E IG Y
Sbjct: 10 PTTPRWNQDRPFLTGRFHQETRASSKFA--DSKRFTLDSSS-----SSGVEQAIGCYDTP 62
Query: 65 VQELLVIDDLLSALVGIEGRYISIKRVRGKEGYVVFQIDSSMDLALQELTRRIFPLCEDF 124
VQEL+VIDDLLSALVGIEGRYISIKR GKE + FQ+D SMDLALQEL +RIFPLCE +
Sbjct: 63 VQELIVIDDLLSALVGIEGRYISIKRFHGKEDSIAFQVDPSMDLALQELAKRIFPLCEYY 122
Query: 125 VLVYHFVESRSHFKSGLVNHXXXXXXXXXXXDYQAMVAQLEHQFRLGRLSVQGLWFFCQR 184
+L+ FVES S FK+GLVNH DYQAMVAQLEHQFRLGRLS+QGLWF+CQ
Sbjct: 123 LLIDQFVESSSQFKNGLVNHAFAAALRALLLDYQAMVAQLEHQFRLGRLSIQGLWFYCQP 182
Query: 185 MMSSLNALAVLVEKAISNNTSGSATLNLLQSQAKAMAGDSAVRSLLEKMTECASAAYLRM 244
MM S+ ALA ++++A + GS LNLLQSQAKAMAGD++VRSLLEKMTECAS AYL +
Sbjct: 183 MMGSMRALAAVIQQASTKQFVGSGVLNLLQSQAKAMAGDNSVRSLLEKMTECASNAYLSI 242
Query: 245 LERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYWQQRYSLKDGIPSFLTNVAATI 304
LERWVYEG+IDDPYGEFFIAEN+SL+KESL+QD AKYW QRYSLKD IP FL N+AATI
Sbjct: 243 LERWVYEGIIDDPYGEFFIAENRSLKKESLSQDSTAKYWSQRYSLKDTIPGFLANIAATI 302
Query: 305 LTTGKYLNVMRECEYTVQVPLSESSKLMGFGSNHQYLECIKSAYDFASGELLTLMKDKYD 364
LTTGKYLNVMREC + VQVP+SE SKL FGSNH YLECIK+A++FAS EL+ L+KDKYD
Sbjct: 303 LTTGKYLNVMRECGHNVQVPISERSKLTIFGSNHHYLECIKAAHEFASIELVNLIKDKYD 362
Query: 365 LIGKLRSLKRYLLLDQGDFLVHFMDIAREELTKKPEEISVEKLQSLVDIALRSTAAASDP 424
L+G+LRS+K YLLLDQGDFLVHFMDIAREEL KK EISVEKLQSL+D+ALR+TAAA+DP
Sbjct: 363 LVGRLRSIKHYLLLDQGDFLVHFMDIAREELNKKVHEISVEKLQSLLDLALRTTAAAADP 422
Query: 425 SHEDLTCCVERXXXXXXXXXXXXXXCAYPSDKLVAADVDHPMPLSVTGLETFCLSYKVQW 484
HEDLTCCV+R D P+S+TGLETF LSYKVQW
Sbjct: 423 RHEDLTCCVDRASLLTTLGMHKDTDSNSIED-----------PMSITGLETFSLSYKVQW 471
Query: 485 PLSLVISRKSLTKYQLIFRLLFHCKHVSRQLCTAWQIQQGFRSVKILGTPVLRSSILCRS 544
PLS+VIS+K+L+KYQLIFR LFHCKHV RQLC AWQI QG RS+ GT +LRSS+LCRS
Sbjct: 472 PLSIVISKKALSKYQLIFRFLFHCKHVERQLCGAWQIHQGIRSMNSKGTAILRSSLLCRS 531
Query: 545 MLKFVNSLLHYLTFEVLEPNWHLMHDRLQTARSIDEVIQIHDFFXXXXXXXXXXXXXXXX 604
MLKF++SLLHYLTFEVLEPNWH+MHDRLQ+ RS+DEVIQ HDFF
Sbjct: 532 MLKFISSLLHYLTFEVLEPNWHVMHDRLQSTRSVDEVIQHHDFFLDKCLRGCLLLLPDVL 591
Query: 605 XXXXXXXALCLQYATSIQLLI-PSIDVAKPENTSKSRMPRSKIKETKNRGQQLKLASENV 663
++CLQYA + Q LI SID+ S+S ++ I++T
Sbjct: 592 KKMEKLKSVCLQYAAATQWLISSSIDI-----NSQSHPQKTMIRDT-------------- 632
Query: 664 VMSESILKFEAEFNSELQSLIPTLSNSSQAEPYLTHLGQCILGV 707
++ESI FE EFNSELQSL P LS SQAEPYLTHL Q ILGV
Sbjct: 633 TVTESIFNFEREFNSELQSLGPVLSKGSQAEPYLTHLSQWILGV 676
>AT5G06680.1 | chr5:2056741-2059369 FORWARD LENGTH=839
Length = 838
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 234/568 (41%), Gaps = 95/568 (16%)
Query: 65 VQELLVIDDLLSALVGIEGRYISIKRVRGKEGYVVFQIDSSMDLALQELTRRIFPLCEDF 124
V E +++ D+L A GI+G+Y+ +GY V Q + A + + R + L F
Sbjct: 184 VTEEVLVRDVLYASQGIDGKYVKFNS--EIDGYAV-QESVKVPRATRIMVRMLSELGWLF 240
Query: 125 VLVYHFV-ESRSHFKS---GLVNHXXXXXXXXXXXDYQAMVAQLEHQ------------- 167
V F+ ES F + G V DY ++A LE Q
Sbjct: 241 RKVKTFITESMDRFPAEDVGTVGQAFCAALQDELSDYYKLLAVLEAQAMNPIPLVSESAS 300
Query: 168 ----FRLGRLSVQGLWFFCQRMMSSLNALAVLVEKAISNNTSGSATLNLLQSQAKAMAGD 223
L RLSV WF M + +AVLV+K G A + A+ GD
Sbjct: 301 SNNYLSLRRLSV---WF--AEPMVKMRLMAVLVDKC--KVLRGGAMAGAIHLHAQH--GD 351
Query: 224 SAVRSLLEKMTECASAAYLRMLERWVYEGVIDDPYGEFFIAENKSLQKESLTQDYDAKYW 283
V + + C + M+ WV EG ++D +GEFF+ + ++ + L W
Sbjct: 352 PLVHDFMMSLLRCVCSPLFEMVRSWVLEGELEDTFGEFFVV-GQPVKVDLL--------W 402
Query: 284 QQRYSLKDG-IPSFLT-NVAATILTTGKYLNVMREC-----------EYTVQVPLSESSK 330
++ Y L +PSF++ ++A IL TGK +N +R C E +
Sbjct: 403 REGYKLHPAMLPSFISPSLAQRILRTGKSINFLRVCCDDHGWADAASEAAAASGTTTRRG 462
Query: 331 LMGFGSNHQYLECIKSAYDFASGELLTLMKDKYDLIGKLRSLKRYLLLDQGDFLVHFMDI 390
+G+G + A LL ++ +Y ++KRYLLL QGDF+ + MDI
Sbjct: 463 GLGYGETDALEHLVTEAAKRIDKHLLDVLYKRYKFKEHCLAIKRYLLLGQGDFVQYLMDI 522
Query: 391 AREELTKKPEEISVEKLQSLVDIALRSTAAASDPSHEDLTCCVERXXXXXXXXXXXXXXC 450
+L++ IS +L ++ A+R++ A D D+
Sbjct: 523 VGPKLSEPANNISSFELAGFLEAAIRASNAQYD--DRDML-------------------- 560
Query: 451 AYPSDKLVAADVDHPMPLSVTGLETFCLSYKVQWPLSLVISRKSLTKYQLIFRLLFHCKH 510
D+L + H G + F L Y+ + PL V + L+KY +F L+ K
Sbjct: 561 ----DRLRVKMMPHGS--GDRGWDVFSLEYEARVPLDTVFTESVLSKYLRVFNFLWKLKR 614
Query: 511 VSRQLCTAWQIQQ-------GF----RSVKI-LGTPVLRSSILCRSMLKFVNSLLHYLTF 558
V L W+ + F SVK+ L + + R +L M FV + +Y+ F
Sbjct: 615 VEHALIGIWKTMKPNCITSNSFVKLQSSVKLQLLSALRRCQVLWNEMNHFVTNFQYYIMF 674
Query: 559 EVLEPNWHLMHDRLQTARSIDEVIQIHD 586
EVLE +W ++ A+ +D+++ H+
Sbjct: 675 EVLEVSWSNFSKEMEAAKDLDDLLAAHE 702
>AT3G53760.1 | chr3:19918182-19922264 REVERSE LENGTH=746
Length = 745
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 112/589 (19%), Positives = 211/589 (35%), Gaps = 112/589 (19%)
Query: 202 NNTSGSATLNLLQSQAKAMAGDSAVRSLLEKMTECASAAYLRMLERWVYEGVIDDPYGEF 261
++ G LN+L + G +R+ L+++ L W+ G++ DP+GEF
Sbjct: 174 DDIRGGQLLNVLNK--RCHCGVPELRTCLQRLLWNGHQVMYNQLAAWMVYGILQDPHGEF 231
Query: 262 FIA-------ENKSLQKE-------SLTQDYDAKYWQQRYSLK-DGIPSFL-TNVAATIL 305
FI +++S Q+E + + W + + D +P ++ + +IL
Sbjct: 232 FIKRQDDGDLDHRSSQEEVSEKLARTSVHETSLTDWHSGFHISLDMLPDYIPMRLGESIL 291
Query: 306 TTGKYLNVMRECEYTVQ-----------------------------------------VP 324
GK + V+R Q +P
Sbjct: 292 FAGKAIRVLRNPSPAFQFQKDKSFQQTMRGSQRIRGFMHSDFPETETELDADLTGGELLP 351
Query: 325 LSESSKLMGFGSN--------HQYLEC-IKSAYDFASGELLTLMKDKYDLIGKLRSLKRY 375
SE+ K+ + + EC + S A+ L L+ + DL G L++LK Y
Sbjct: 352 QSEADKIEAMLKDLKESSEFHKRSFECTVDSVRAIAASHLWQLVVVRADLNGHLKALKDY 411
Query: 376 LLLDQGDFLVHFMDIAREELTKKPEEISVEK-LQSLVDIALRSTAAASDPSHEDLTCCVE 434
LL++GDF F++ +R+ + P + + E L +A T A D ++ +
Sbjct: 412 FLLEKGDFFQCFLEESRQLMRLPPRQSTGESDLMVPFQLAATKTIAEEDKYFSRVSLRMP 471
Query: 435 RXXXXXXXXXXXXXXCAYPSDKLVAADVDHPMPLSVTGLETFCLSYKVQWPLSLVISRKS 494
S + + SV G + L Y V WP+ L +++
Sbjct: 472 SFGVTVRSSQADMVR----SKVSLTGKANLTSDTSVDGWDAIALEYSVDWPMQLFFTQEV 527
Query: 495 LTKYQLIFRLLFHCKHVSRQLCTAW-------------------------QIQQGFRSVK 529
L+KY +F+ L K +L +W Q +QG R
Sbjct: 528 LSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQRRQGIR--- 584
Query: 530 ILGTPVLRSSILCRSMLKF-VNSLLHYLTFEVLEPNWHLMHDRLQTARSIDEVIQIHDFF 588
P+ R R + F + +L Y+ +V+E W ++ + ++ E++ H +
Sbjct: 585 ----PMWR----VREHMAFLIRNLQFYIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEY 636
Query: 589 XXXXXXXXXXXXXXXXXXXXXXXALCLQYATSIQLLIPSIDVAKPENTSKSRMPRSKIKE 648
LCLQ+ +I+ + + ++ EN ++ +S
Sbjct: 637 LSALISQSFLDIGSVSRILDSIMKLCLQFCWNIENQESNPNTSELENIAEEFNKKSNSLY 696
Query: 649 TKNRGQQLKLASENVVMSESILKFEAEFNSELQSLIPTLSNSSQAEPYL 697
T R +L + + +L+ FNS ++ + N + P L
Sbjct: 697 TILRSSKLAGSQRAPFLRRFLLRL--NFNSFYEATARGVLNVVRQRPAL 743
>AT1G80260.1 | chr1:30175924-30180511 FORWARD LENGTH=996
Length = 995
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 37/259 (14%)
Query: 344 IKSAYDFASGELLTLMKDKYDLIGKLRSLKRYLLLDQGDFLVHFMDIAREELTKKPEEIS 403
I+ D+ +L+ + + + L+ +L L+ LL GD L HF+ + + L K
Sbjct: 633 IRRQVDYIGKVILSKLMNDWKLMHELAVLRAIYLLGSGDLLQHFLTVIFDRLGKGESSND 692
Query: 404 VEKLQSLVDIALRSTAAASDPSHED-LTCCVERXXXXXXXXXXXXXXCAYPSDKLVAADV 462
+L ++ ++R++A A S D L + R DK D+
Sbjct: 693 DFELNIILQESIRNSADAMLLSSPDSLVVSISRE----------------DRDKDDKGDI 736
Query: 463 DHPMPLSVTG-----------LETFCLSYKVQWPLSLVISRKSLTKYQLIFRLLFHCKHV 511
+PLS T LE+ +YKV WPL L+ + +++ KY + L K
Sbjct: 737 ---IPLSSTRKSRVNSFGIDCLESLKFTYKVPWPLELIANSEAIKKYNQVMGFLLKVKRA 793
Query: 512 SRQLCTA--WQIQQGFRSVKILGTPVLRSSILCRSMLKFVNSLLHYLTFEVLEPNWHLMH 569
L A W + + KI L L + +L FV++ Y+ V W +
Sbjct: 794 KYVLDKARRWMWKGKGSATKIRKHHWL----LEQKLLNFVDAFHQYVMDRVYHTAWRELC 849
Query: 570 DRLQTARSIDEVIQIHDFF 588
+ + A S+DEVI +H+ +
Sbjct: 850 EAMVKAGSLDEVIYVHETY 868
>AT1G20570.1 | chr1:7122018-7126559 REVERSE LENGTH=977
Length = 976
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 37/257 (14%)
Query: 344 IKSAYDFASGELLTLMKDKYDLIGKLRSLKRYLLLDQGDFLVHFMDIAREELTKKPEEIS 403
I+ D S + + + +++ L+ +L L+ LL GD L HF+ + + L K
Sbjct: 632 IRRQVDNISKVIFSKLMNEWKLMHELAVLRAIYLLGSGDLLQHFLTVIFDRLGKGESSND 691
Query: 404 VEKLQSLVDIALRSTAAASDPSHEDLTC-------CVERXXXXXXXXXXXXXXCAYPSDK 456
+L ++ ++R++A S D C++R DK
Sbjct: 692 DFELNIIIQESIRNSADTMLLSSPDALVVSISSEGCLDRDK----------------DDK 735
Query: 457 LVAADVDHPMPLSVTG-----LETFCLSYKVQWPLSLVISRKSLTKYQLIFRLLFHCKHV 511
+ P SV LE+ +YKV WPL L+ + +++ KY + R +
Sbjct: 736 GDVKSLSSPRESSVNNYAIDCLESLKFTYKVPWPLELIANSEAIKKYNQVKRAKYVLDKA 795
Query: 512 SRQLCTAWQIQQGFRSVKILGTPVLRSSILCRSMLKFVNSLLHYLTFEVLEPNWHLMHDR 571
R + W+ + ++ +L + +L FV++ Y+ V W + +
Sbjct: 796 RRLM---WKGKGSATKIR------KHHCLLEQKLLNFVDAFHQYVMDRVYHTAWRELCEA 846
Query: 572 LQTARSIDEVIQIHDFF 588
+ A S+DEVI +H+ +
Sbjct: 847 MVKAGSLDEVIDVHETY 863
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,664,777
Number of extensions: 456285
Number of successful extensions: 1179
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1168
Number of HSP's successfully gapped: 6
Length of query: 711
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 605
Effective length of database: 8,200,473
Effective search space: 4961286165
Effective search space used: 4961286165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)