BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0499100 Os04g0499100|AK072725
(527 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G25050.1 | chr5:8632022-8633828 FORWARD LENGTH=500 429 e-120
AT1G79710.1 | chr1:29995137-29996988 FORWARD LENGTH=498 396 e-110
AT5G25040.2 | chr5:8622185-8623965 FORWARD LENGTH=518 354 8e-98
AT5G10820.1 | chr5:3420876-3423166 REVERSE LENGTH=504 297 1e-80
AT2G32040.1 | chr2:13635116-13637592 FORWARD LENGTH=561 135 4e-32
AT5G54860.1 | chr5:22284721-22287025 FORWARD LENGTH=492 108 8e-24
AT1G64890.1 | chr1:24109752-24111165 FORWARD LENGTH=443 64 3e-10
AT2G33280.1 | chr2:14106410-14107720 FORWARD LENGTH=409 55 1e-07
AT1G04570.1 | chr1:1246859-1248600 REVERSE LENGTH=543 54 3e-07
>AT5G25050.1 | chr5:8632022-8633828 FORWARD LENGTH=500
Length = 499
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/464 (46%), Positives = 284/464 (61%), Gaps = 1/464 (0%)
Query: 23 PGGWLRRLSRELHWSFVLAVVAVYXXXXXXXXXXXXXXXXYYWKDVQRVQPSAAQFYQGF 82
P WL+ LS ELHWSFV VV++Y YY KDVQ+VQPS +Q
Sbjct: 30 PVRWLKMLSSELHWSFVFGVVSLYGINQGLGGSLGRVATEYYMKDVQKVQPSESQALTAI 89
Query: 83 VSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSMLTLSLHRKLGIMPAILALTA 142
PW++KP+WG+LTDV+P+ G+ RRPYF+LAGV+G S+L +SLH L + A+ +T
Sbjct: 90 TKIPWIIKPLWGILTDVLPIFGFHRRPYFILAGVLGVVSLLFISLHSNLHLYLALFWMTI 149
Query: 143 QSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGFSSSVGALLGFSISGLLVHSMGSQG 202
S NSI H LA+DMQSLC SSS+GALLGF +SG+LVH +GS+G
Sbjct: 150 SSAAMAIADVTIDACTAYNSIKHPSLASDMQSLCSLSSSIGALLGFFMSGILVHLVGSKG 209
Query: 203 ALGLLSIPSALVFLAGVLLKERRVTDFDYKQVHRKFYKAIQSMGATLKCAEVWRPCVYMY 262
GLL+ P ALV + G++ E V F YKQV++KF A ++M T+KC++VWRP +YMY
Sbjct: 210 VFGLLTFPFALVSVVGIVFSEPHVPGFSYKQVNQKFTDAGKAMWRTMKCSDVWRPSLYMY 269
Query: 263 VSLSLSLDIQAGMFYWYTDPIVGPGFSEEFXXXXXXXXXXXXXXXXXXXQISLKDCPFRG 322
+SL+L L+I G+FYW+TD GP F++E Q+ LKD PFRG
Sbjct: 270 ISLTLGLNIHEGLFYWFTDSKDGPLFAQETVGFILSIGSIGSILAATLYQLVLKDHPFRG 329
Query: 323 VLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLPLLVLCSKL 382
+ W Q+L +L+GMLDLI+V RLN + G+PDY+F V+D VSQM+GRLKW+PLLVL SKL
Sbjct: 330 LCLWTQLLFALSGMLDLILVFRLNLKFGLPDYLFIVVDEIVSQMIGRLKWMPLLVLTSKL 389
Query: 383 CPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXXXNVTRTEFSNLWVAVXXXXXXXXXXX 442
CP GIEGTF+ALLMSI NA VTRTEF NLW+AV
Sbjct: 390 CPHGIEGTFFALLMSIDNAGLMTSSWLGGIMLHVLKVTRTEFGNLWLAVLVRNVMRLLPL 449
Query: 443 XXXXXVPQSDQNSMLLPAEML-QDNESTEARKGGQDTAEFSVLV 485
VP+ DQN+ LP E++ +D++ + K G E + LV
Sbjct: 450 CFLFLVPKGDQNTFKLPDEIMGEDSDEEKDEKEGTRNLELASLV 493
>AT1G79710.1 | chr1:29995137-29996988 FORWARD LENGTH=498
Length = 497
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/469 (44%), Positives = 270/469 (57%), Gaps = 7/469 (1%)
Query: 23 PGGWLRRLSRELHWSFVLAVVAVYXXXXXXXXXXXXXXXXYYWKDVQRVQPSAAQFYQGF 82
P WLR L ELHWSF V+ VY YY+KD Q++QPS AQ Y G
Sbjct: 34 PLRWLRMLIEELHWSFFFGVIIVYGVSQGLGKGLSKVSTQYYFKDEQKIQPSQAQIYVGL 93
Query: 83 VSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSMLTLSLHRKLGIMPAILALTA 142
+ PW++KP+WGLLTDVVPV GYRRRPYF+LAG + SM+ L LH L + A+ L A
Sbjct: 94 IQIPWIIKPLWGLLTDVVPVLGYRRRPYFILAGFLAMISMMVLWLHTNLHLALALSCLVA 153
Query: 143 QSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGFSSSVGALLGFSISGLLVHSMGSQG 202
S Q SI+H LAADMQSLCG SS+G+L+GFS+SG+LVH +GS+G
Sbjct: 154 GSAGVAIADVTIDACVTQCSISHPTLAADMQSLCGLCSSIGSLVGFSLSGVLVHLVGSKG 213
Query: 203 ALGLLSIPSALVFLAGVLLKERRVTDFDYKQVHRKFYKAIQSMGATLKCAEVWRPCVYMY 262
GLL + + L+ + G++LKE K V+ KF A ++ T + EVWRPC++M
Sbjct: 214 VYGLLGVTAGLLVVVGMVLKESPSRSLGRKHVNDKFLDAGSAIWKTFQYGEVWRPCLFML 273
Query: 263 VSLSLSLDIQAGMFYWYTDPIVGPGFSEEFXXXXXXXXXXXXXXXXXXXQISLKDCPFRG 322
+S ++SL I GMFYWYTD GP FS+E Q LK+ PFR
Sbjct: 274 LSAAVSLHIHEGMFYWYTDSKDGPSFSKEAVGSIMSFGAIGSLVGILLYQNFLKNFPFRN 333
Query: 323 VLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLPLLVLCSKL 382
V+FW LS L+G LDLI+V R+N ++G+PDY F V+D VS M+ R+KWLPLLVL SKL
Sbjct: 334 VVFWALSLSVLSGFLDLILVLRINLKLGLPDYFFIVVDEFVSHMISRIKWLPLLVLSSKL 393
Query: 383 CPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXXXNVTRTEFSNLWVAVXXXXXXXXXXX 442
CP G+EGTF+ALLMSI++ VTRT+F NLW+ +
Sbjct: 394 CPAGMEGTFFALLMSIEHIGHLVSSWGGGVLLHALKVTRTQFDNLWLVIVIRSLLRVIPI 453
Query: 443 XXXXXVPQSDQNSMLLPAEMLQDNESTEARKGGQDTA--EFSVLVADDS 489
+P D NS +LPAEML S G DT E + L++D++
Sbjct: 454 GLVFLIPNVDSNSTILPAEMLTSRISE-----GVDTEKIEMTALISDEA 497
>AT5G25040.2 | chr5:8622185-8623965 FORWARD LENGTH=518
Length = 517
Score = 354 bits (908), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 192/478 (40%), Positives = 261/478 (54%), Gaps = 29/478 (6%)
Query: 23 PGGWLRRLSRELHWSFVLAVVAVYXXXXXXXXXXXXXXXXYYWKDVQRVQPSAAQFYQGF 82
P WL+ L+ +LHWS+V AVV+ YY KDVQ+VQPS Q
Sbjct: 30 PVRWLKMLASKLHWSYVFAVVSNCGINQGFGYSLGHVATDYYMKDVQKVQPSQYQALSAI 89
Query: 83 VSAPWVV-KPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSMLTLSLHRKLGIMPAILALT 141
W++ KP++G+LTDV+P+ G+ RRPYF+LAGVIG S+L +SL L + A+ +T
Sbjct: 90 TRISWIIFKPLFGILTDVLPIFGFHRRPYFILAGVIGVVSLLFISLQSNLHLYLALFWMT 149
Query: 142 AQSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGFSSSVGALLGFSISGLLVHSMGSQ 201
S NS H LA+DMQSLC S S+G LLGF +SG+LVH +GS+
Sbjct: 150 ISSAAMAIADVTIDACTTYNSNKHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSK 209
Query: 202 GALGLLSIPSALVFLAGVLLKERRVTDFDYKQVHRKFYKAIQSMGATLKCAEVWRPCVYM 261
G GLL+ ALV + GVL E RV F +KQ F A+++M T+KC++VW+P +YM
Sbjct: 210 GVFGLLTFTFALVSVVGVLFSEPRVHGFSFKQ---NFTNAMKAMWRTIKCSDVWQPSLYM 266
Query: 262 YVSLSLSLDIQAGMFYWYTDPIVGPGFS-------------------------EEFXXXX 296
+++ +L LDI+ G+FYW+TD GP F+ +E
Sbjct: 267 FITRALGLDIKEGLFYWFTDSKDGPLFAQVIPKQVASIFSKSTNMLKAFLVCFQETVGFI 326
Query: 297 XXXXXXXXXXXXXXXQISLKDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVF 356
+ LKD PFR + W Q+L +L+GM DLI+V RLN + G+PDY+F
Sbjct: 327 LSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGMFDLILVLRLNLKFGLPDYLF 386
Query: 357 AVIDNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXX 416
V+D VS+M+ RL W+ + VL +KLCP GIEGTF+ALLMSI NA
Sbjct: 387 IVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHV 446
Query: 417 XNVTRTEFSNLWVAVXXXXXXXXXXXXXXXXVPQSDQNSMLLPAEMLQDNESTEARKG 474
VTRTEF NLW+AV VPQ DQN+ LPAE++ ++ E +
Sbjct: 447 LKVTRTEFGNLWLAVLVRNVMRLLPICFLFLVPQGDQNTFKLPAEIMGEDSEEEGTRN 504
>AT5G10820.1 | chr5:3420876-3423166 REVERSE LENGTH=504
Length = 503
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 246/452 (54%), Gaps = 9/452 (1%)
Query: 23 PGGWLRRLSRELHWSFVLAVVAVYXXXXXXXXXXXXXXXXYYWKDVQRVQPSAAQFYQGF 82
P WL+ LS L+ SFVL VV VY YYWKDVQ+VQPS Q Y G
Sbjct: 42 PFQWLQMLSSRLNLSFVLGVVLVYGVNQGFSGSIFKVVTDYYWKDVQQVQPSVVQLYMGL 101
Query: 83 VSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSMLTLSLHRKLGIMPAILALT- 141
PWV++PIWGL TDV P+ GY+R+PYF+++GV+G S + + + LG +PA LAL+
Sbjct: 102 YYIPWVMRPIWGLFTDVFPIKGYKRKPYFVVSGVLGLVSAIAIVV---LGKLPAALALSC 158
Query: 142 --AQSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGFSSSVGALLGFSISGLLVHSMG 199
S NSI + LA D+QSLC SS GAL+G++ SG+ VH +G
Sbjct: 159 LLGVSAAMAIADVVIDACIATNSINIRSLAPDIQSLCMVCSSAGALVGYATSGVFVHQLG 218
Query: 200 SQGALGLLSIPSALVFLAGVLLKERRVTDFDYKQVHRK---FYKAIQSMGATLKCAEVWR 256
QGALG+L+ A + + G + E+R + ++ + A++ M T+K EVW+
Sbjct: 219 PQGALGVLAFSPATIVILGFFIYEKRSSTVPTQKTKKDTDGLGVAVKGMCKTVKYPEVWK 278
Query: 257 PCVYMYVSLSLSLDIQAGMFYWYTDPIVGPGFSEEFXXXXXXXXXXXXXXXXXXXQISLK 316
P +YM++SL+L++ G FYWYTDP GP FS+EF LK
Sbjct: 279 PSLYMFISLALNISTHEGHFYWYTDPTAGPAFSQEFVGIIYAVGALASMFGVLIYHKKLK 338
Query: 317 DCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLPLL 376
FR +LF+ Q+L +GMLDL+ + R N +GIPD +F + + S ++M+ +++W+P++
Sbjct: 339 GYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIPDSLFVITEESFTKMISKIRWIPMV 398
Query: 377 VLCSKLCPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXXXNVTRTEFSNLWVAVXXXXX 436
VL ++LCP GIEGTF+A LM I + VTR +F NLW+ +
Sbjct: 399 VLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGFVLHAFGVTRHDFGNLWLVILIRNI 458
Query: 437 XXXXXXXXXXXVPQSDQNSMLLPAEMLQDNES 468
VP SD L+P+++L +S
Sbjct: 459 LRLVTVCFVFLVPDSDHLDDLVPSDVLPKKQS 490
>AT2G32040.1 | chr2:13635116-13637592 FORWARD LENGTH=561
Length = 560
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 165/376 (43%), Gaps = 16/376 (4%)
Query: 63 YYWKDVQRVQPSAAQFYQGFVSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSM 122
+Y KD + P+ G S PW+VKP++G ++D VP+ GYRRR Y +L+G++GA S
Sbjct: 149 FYLKDDLHLDPAETAVITGLSSLPWLVKPLYGFISDSVPLFGYRRRSYLVLSGLLGAFSW 208
Query: 123 LTLSLHRKLGIMPAILALTAQSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGFSSSV 182
++ A L + Q ++ +QSLC SS+
Sbjct: 209 SLMAGFVDSKYSAAFCILLGSLSVAFSDVVVDSMVVERARGESQSVSGSLQSLCWGSSAF 268
Query: 183 GALLGFSISGLLVHSMGSQGALGLLSIPSALVFLAGVLLKERRVTDFDYKQ--------- 233
G ++ SG LV S G + G+ ++ + VL+ E+RV Q
Sbjct: 269 GGIVSSYFSGSLVESYGVRFVFGVTALLPLITSAVAVLVNEQRVVRPASGQKENITLLSP 328
Query: 234 --VHRKFYKAIQSMGATLKCAEVWRPCVYMYVSLSLSLDIQAGMFYWYTDPIVGPGFSEE 291
+ IQ GA +K V+ P +++++ + + MFY+ T+ + GF+ E
Sbjct: 329 GFLQTSKQNMIQLWGA-IKQPNVFLPTLFIFL-WQATPHSDSAMFYFTTNKL---GFTPE 383
Query: 292 FXXXXXXXXXXXXXXXXXXXQISLKDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGI 351
F LK P R + + + GM +I+V+ N ++GI
Sbjct: 384 FLGRVKLVTSIASLLGVGLYNGFLKTVPLRKIFLVTTIFGTGLGMTQVILVSGFNRQLGI 443
Query: 352 PDYVFAVIDNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMSIQNAXXXXXXXXXX 411
D FA+ D+ + ++ + ++P+LVL ++LCP G+E T +A LMSI N
Sbjct: 444 SDEWFAIGDSLILTVLAQASFMPVLVLAARLCPEGMEATLFATLMSISNGGSVLGGLMGA 503
Query: 412 XXXXXXNVTRTEFSNL 427
+TR F NL
Sbjct: 504 GLTQAFGITRDSFGNL 519
>AT5G54860.1 | chr5:22284721-22287025 FORWARD LENGTH=492
Length = 491
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 26 WLRRLSRELHWSFVLAVVAVYXXXXXXXXXXXXXXXXYYWKDVQRVQPSAAQFYQGFVSA 85
WL++L +F+ V +Y Y KD ++ PSA+QF
Sbjct: 4 WLKQLRSAFGVAFLWLVCLIYFTQGFRSFVWTAVS--YQLKDRLQLSPSASQFVFSVAFF 61
Query: 86 PWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSMLTLSLHR--KLGIMPAILALTAQ 143
PW +KP++G+++D +P+ G +R PY +++ V+ L L L + + ++ LT Q
Sbjct: 62 PWSIKPLYGIISDCIPIGGKKRTPYLVISTVLSLVPWLVLGLDSTSRSSSLYLMIFLTVQ 121
Query: 144 SXXXXXXXXXXXXXXXQN-SITHQPLAADMQSLCGFSSSVGALLGFSISGLLVHSMGSQG 202
+ + + A D+QS+ F+ +VG + G + G + ++ +
Sbjct: 122 NLGSAMADVVIDAMIAEAVRLEKASFAGDLQSVSWFAMAVGGVCGSLLGGYALSNLKIET 181
Query: 203 ALGLLSIPSALVFLAGVLLKERRVTD-----------FDYK------------------- 232
L ++ AL L+ L++E + F+ K
Sbjct: 182 IFLLFTVLPALQLLSCALVEESPANNEPLPELLDSNEFEEKSLTSNDNYPDTSKSNTRRR 241
Query: 233 ---------------QVHRKFYKAIQS------------MGATLKCAEVWRPCVYMYVSL 265
+ +K K++ S +G K + RP + +++
Sbjct: 242 KGQKKGKKGDSNGKSETQKKQSKSLASQWFQSLKAATFGLGRAFKQPIILRPMAWFFIAH 301
Query: 266 SLSLDIQAGMFYWYTDPIVGPGFSEEFXXXXXXXXXXXXXXXXXXXQISLKDCPFRGVLF 325
++ MFY+ T+ + F L+D R L
Sbjct: 302 ITVPNLSTVMFYYQTEVL---QLDAAFLGTARVVGWLGLMFGTFIYNRYLQDMTLRKSLL 358
Query: 326 WGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLPLLVLCSKLCPP 385
+ + S+ +LD+++V+R N G+ D + +++ + +LK++P L+L +LCPP
Sbjct: 359 FAHIGLSVTILLDMVLVSRANVGYGVSDKTMVLFGSALGDAINQLKFMPFLILSGRLCPP 418
Query: 386 GIEGTFYALLMSIQN 400
GIEGT +AL MSI N
Sbjct: 419 GIEGTLFALFMSINN 433
>AT1G64890.1 | chr1:24109752-24111165 FORWARD LENGTH=443
Length = 442
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 7/339 (2%)
Query: 63 YYWKDVQRVQPSAAQFYQGFVSAPWVVKPIWGLLTDVVPVAGYRRRPYFLLAGVIGASSM 122
++ + RV PS Q Q + P V KPI+G+++D V G R PY + ++ A S
Sbjct: 42 FFLTEQLRVNPSVLQLLQNSANLPMVAKPIYGVVSDSVYFFGQHRIPYIAVGALLQAISW 101
Query: 123 LTLSLHRKLGI----MPAILALTAQSXXXXXXXXXXXXXXXQNSITHQPLAADMQSLCGF 178
L ++ + + + L L+ T + + ++ S
Sbjct: 102 LAIAFLSRSNVSILALSIYLLLSNLGASLVEVANDAIVAESGKQKTSETQSGELPSFVWM 161
Query: 179 SSSVGALLGFSISGLLVHSMGSQGALGLLSIPSALVFLAGVLLKERRVTDFDYKQVHRKF 238
SS+G +LG + G+ + + +Q + I + L FL + ++E+ + +
Sbjct: 162 VSSLGGILGNLLGGIAIKTFSAQSTFLVFGILALLQFLVTINIREKSLNLPENPSPAGGI 221
Query: 239 YKAIQSMGATLKCAEVWRPCVYMYVSLSLSLDIQAGMFYWYTDPIVGPGFSEEFXXXXXX 298
K + + L+ E+ ++ VS ++ + MF++ T +
Sbjct: 222 RKHLSDLSHVLRKPEISYSIAWIAVSTAVVPVLTGTMFFYQTKFL---KIDASLLGISKV 278
Query: 299 XXXXXXXXXXXXXQISLKDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAV 358
LK R +L QV + + DL+ V + +G+ D V+ +
Sbjct: 279 FGQIAMLLWGFAYNRWLKAMRPRKLLTAIQVTIAFFVISDLLFVKGVYRDLGVSDSVYVL 338
Query: 359 IDNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMS 397
+ + + K LP VL ++LCPPG EG+ A +MS
Sbjct: 339 FFSGFLETLFYFKILPFTVLMARLCPPGCEGSLMAFVMS 377
>AT2G33280.1 | chr2:14106410-14107720 FORWARD LENGTH=409
Length = 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 316 KDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLPL 375
K P R ++ Q+L + + + D I+V ++N GI + F + +SV++++ + K LP
Sbjct: 234 KKLPMRALIHIVQLLYAFSLLFDYILVKQINLAFGISNTAFVLCFSSVAEILAQFKILPF 293
Query: 376 LVLCSKLCPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXXXNVTRTEFSNL 427
VL + +CP G EG+ + L S +T +SNL
Sbjct: 294 SVLLANMCPGGCEGSITSFLASTLCLSSVVSGFTGVGMANMIGITSKNYSNL 345
>AT1G04570.1 | chr1:1246859-1248600 REVERSE LENGTH=543
Length = 542
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 315 LKDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVIDNSVSQMVGRLKWLP 374
LK P R ++ Q+L L+ +LD I+V ++N GI + V+ + +S+++++ + K LP
Sbjct: 362 LKTLPMRPLIHIIQLLYGLSILLDYILVKQINLGFGISNEVYVLCFSSLAEILAQFKILP 421
Query: 375 LLVLCSKLCPPGIEGTFYALLMSIQNAXXXXXXXXXXXXXXXXNVTRTEFSNL 427
V + +CP G EG+ + L S +T + +SNL
Sbjct: 422 FAVRLASMCPQGCEGSVTSFLASTLCLSQIVSAFLGVGLANLIGITSSNYSNL 474
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,698,175
Number of extensions: 293744
Number of successful extensions: 628
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 601
Number of HSP's successfully gapped: 11
Length of query: 527
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 424
Effective length of database: 8,282,721
Effective search space: 3511873704
Effective search space used: 3511873704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)