BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0493400 Os04g0493400|AK060363
(229 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 299 6e-82
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 276 5e-75
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 258 1e-69
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 226 1e-59
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 224 3e-59
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 208 2e-54
AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284 199 1e-51
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 181 3e-46
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 174 3e-44
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 162 9e-41
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 161 3e-40
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 155 2e-38
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 96 2e-20
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 90 9e-19
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 299 bits (766), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 158/207 (76%)
Query: 23 AAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREI 82
A GVSV +VT+ FFNGI +QA + CAG FY+R +FL A SYS F + DDS+REI
Sbjct: 67 ANGVSVAEIVTQEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREI 126
Query: 83 AAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPA 142
AAFFAHVTHETGH CYI EI+GA+ DYCD++ Q+PC P K YYGRGP+Q+SWNFNYGPA
Sbjct: 127 AAFFAHVTHETGHFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPA 186
Query: 143 GKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNP 202
G IGFDGL P+ VA DP ISFKTALW+W N V V+SQGFGATIRAINGALEC+G N
Sbjct: 187 GTAIGFDGLNAPETVATDPVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANT 246
Query: 203 GAVNARVNYYKDYCRQFGVSPGGNLYC 229
V ARV YY DYCRQ GV PG NL C
Sbjct: 247 ATVQARVRYYTDYCRQLGVDPGNNLTC 273
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 157/208 (75%), Gaps = 5/208 (2%)
Query: 22 SAAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKRE 81
+ G SV S+VT+ FFN I NQA NGCAGK FYTR SF+NAA ++ FAN T +RE
Sbjct: 62 TPTGGSVGSIVTQGFFNNIINQAGNGCAGKRFYTRDSFVNAANTFPNFANSVT----RRE 117
Query: 82 IAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGP 141
IA FAH THETGH CYI EINGA +YC SN Q+PC PGK Y+GRGP+Q+SWN+NYG
Sbjct: 118 IATMFAHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGA 177
Query: 142 AGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKN 201
G+++G D LR P+ V +PT++F+T LWFWMN+V V++QGFGATIRAING +ECNG N
Sbjct: 178 CGQSLGLDLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGN 236
Query: 202 PGAVNARVNYYKDYCRQFGVSPGGNLYC 229
GAVNAR+ YY+DYC Q GV PG NL C
Sbjct: 237 SGAVNARIGYYRDYCGQLGVDPGPNLSC 264
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 258 bits (660), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 153/202 (75%), Gaps = 5/202 (2%)
Query: 28 VESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFA 87
V ++VT+ FFN I NQA NGCAGKSFYTR SF+NA ++ FAN T +REIA FA
Sbjct: 69 VGNIVTQIFFNNIINQAGNGCAGKSFYTRDSFINATNTFPSFANTVT----RREIATMFA 124
Query: 88 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIG 147
H T+ETGH CYI EINGA+ CD++N+Q+PC P K Y+GRGPL +SWNFNYG G+++G
Sbjct: 125 HFTYETGHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLG 184
Query: 148 FDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNA 207
D LR P+ V+ +P ++F+TALWFWM +V V++QGFGATIRAI+G +C+G+N G VNA
Sbjct: 185 LDLLRQPELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDCDGRNLGGVNA 243
Query: 208 RVNYYKDYCRQFGVSPGGNLYC 229
R+ YY+DYC Q G+ PG N+ C
Sbjct: 244 RIGYYRDYCGQLGLDPGANITC 265
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 140/203 (68%), Gaps = 8/203 (3%)
Query: 27 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 86
++ SV+T AFFN I ++ +GC K FYTRQ+F+ AA S++ + +KREIAA
Sbjct: 87 TIASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFAAY----KGTVAKREIAAML 142
Query: 87 AHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNI 146
A +HE+G CY EI A YC S +PCQPGK YYGRGP+QI+WN+NYG AGK +
Sbjct: 143 AQFSHESGSFCYKEEI--ARGRYCSPST-TYPCQPGKNYYGRGPIQITWNYNYGAAGKFL 199
Query: 147 GFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVN 206
G L+DPD VA+ PT++F+ A+WFW NV V+SQGFGAT R ING ECNG P AV
Sbjct: 200 GLPLLKDPDMVARSPTVAFQCAMWFWNKNVRPVLSQGFGATTRRINGG-ECNGGRPAAVQ 258
Query: 207 ARVNYYKDYCRQFGVSPGGNLYC 229
+RVN+Y D+C++ GV+PG NL C
Sbjct: 259 SRVNHYLDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 138/203 (67%), Gaps = 8/203 (3%)
Query: 27 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 86
++E+VVT AFF+GI ++ NGC K FYTRQ+F+ AA+S+ + +KREIAA
Sbjct: 89 TIENVVTPAFFDGIMSKVGNGCPAKGFYTRQAFIAAAQSFDAYKGTV----AKREIAAML 144
Query: 87 AHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNI 146
A +HE+G CY EI A YC S +PC PGK YYGRGP+QI+WN+NYG AGK +
Sbjct: 145 AQFSHESGSFCYKEEI--ARGKYCSPSTA-YPCTPGKDYYGRGPIQITWNYNYGAAGKFL 201
Query: 147 GFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVN 206
G L DPD VA+ P ++F+ A+WFW NV V+ QGFGAT R ING ECNG+ P AV
Sbjct: 202 GLPLLTDPDMVARSPQVAFQCAMWFWNLNVRPVLDQGFGATTRKINGG-ECNGRRPAAVQ 260
Query: 207 ARVNYYKDYCRQFGVSPGGNLYC 229
+RVNYY ++CR G++PG NL C
Sbjct: 261 SRVNYYLEFCRTLGITPGANLSC 283
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 135/209 (64%), Gaps = 11/209 (5%)
Query: 26 VSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAF 85
VS+E VT FFN I NQ + C GK FYT +F+ AA SY F SKREIAAF
Sbjct: 75 VSLEGTVTPDFFNSILNQRGD-CPGKGFYTHDTFMAAANSYPSFGASI----SKREIAAF 129
Query: 86 FAHVTHETGHMCYINEING----ANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGP 141
FAHV ETG MCYI EI+G A+ +YCD ++PC GK YYGRG +Q+SWN+NYG
Sbjct: 130 FAHVAQETGFMCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGL 189
Query: 142 AGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKN 201
GK + + L P+KVAQD ++FKTA WFW NV GFGATIRA+N + EC+G +
Sbjct: 190 CGKALDENLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVN-SRECSGGD 248
Query: 202 PGAVNA-RVNYYKDYCRQFGVSPGGNLYC 229
A A R+ Y++DYC + GV+PG NL C
Sbjct: 249 STAKAANRIKYFQDYCGKLGVAPGDNLTC 277
>AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284
Length = 283
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 142/224 (63%), Gaps = 22/224 (9%)
Query: 4 SPTLTMLVFLAIGLSLV---LSAAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFL 60
S ++++ FL + + ++A SV S+VT+ FFN I NQA NGC K F TR SF+
Sbjct: 3 STKISLVFFLCLVGPCIGAGTTSAAESVSSIVTQGFFNNIINQAGNGCTRKRFNTRDSFI 62
Query: 61 NAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPC- 119
+AA ++ FA+ T +REIA+ FAHVTHETGH CYI EI + CD++ +Q PC
Sbjct: 63 DAANNFPNFASSVT----RREIASMFAHVTHETGHFCYIEEIKKRSRGRCDENVEQRPCP 118
Query: 120 QPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQV 179
K + GRG +++G D LR P+ V +PT++F+ L FW+N+V V
Sbjct: 119 SQSKGHSGRG-------------HQSLGLDLLRQPELVGSNPTVAFRKGLSFWINSVRPV 165
Query: 180 MSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSP 223
++QGFGATIRAING +ECNG N GAV AR+ YY+DYCRQ GV P
Sbjct: 166 LNQGFGATIRAING-MECNGGNSGAVKARIGYYRDYCRQLGVDP 208
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 11/205 (5%)
Query: 28 VESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFA 87
+ES+VT A F+ + + + C GK FYTR++F+ A +S+ G+ +KREIAA A
Sbjct: 84 IESIVTPALFHRLMRKVGSNCTGKGFYTREAFITAVKSFEGYKGT----VAKREIAAILA 139
Query: 88 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQ-ISWNFNYGPAGKNI 146
++E+G+ CY E+ YC S+K +PCQ GKKYYGRG LQ I WN YG AGK +
Sbjct: 140 QFSYESGNFCYKEEVTSET--YCS-SSKTYPCQSGKKYYGRGLLQSIKWNEFYGEAGKYL 196
Query: 147 GFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGK--NPGA 204
G L+DPD VA+ P ++FK A+WFW V + GFGAT ING +EC G N A
Sbjct: 197 GLPLLKDPDMVARSPEVAFKFAMWFWKTEVGPSLRLGFGATTMRING-IECGGMSWNAEA 255
Query: 205 VNARVNYYKDYCRQFGVSPGGNLYC 229
+ R+N Y + C+ FGV+PG +LYC
Sbjct: 256 MQNRINQYLEICKWFGVNPGKDLYC 280
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 174 bits (442), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 141/267 (52%), Gaps = 40/267 (14%)
Query: 1 MANSPTLTMLVFLAIGLSLVLSAA---GVSVESVVTEAFFNGIKNQAPN-GCAGKSFYTR 56
MA + +L F + +S +LS+A S+E +V +N I N C FYT
Sbjct: 1 MAQQHSFLLLCFF-LSISYLLSSAQTEATSIERLVPRDLYNKIFIHKDNTACPANGFYTY 59
Query: 57 QSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEIN 103
+SF+ A R + F + + + E+AAF A ++HET +C+ E++
Sbjct: 60 ESFVQATRRFPRFGSVGSPVTQRLEVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVS 119
Query: 104 GANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTI 163
+ YCD S+ QWPC P K Y GRGP+Q+SWN+NYGPAG+ +GFDGLR+P+ V+ + I
Sbjct: 120 PQST-YCDSSDTQWPCFPNKTYQGRGPIQLSWNYNYGPAGRALGFDGLRNPETVSNNSVI 178
Query: 164 SFKTALWFWMN------NVHQVM---------------SQGFGATIRAINGALECNGKNP 202
+F+TALWFWM + H VM + GFG T ING LEC
Sbjct: 179 AFQTALWFWMTPQSPKPSCHDVMIGKYRPTAADLAANRTGGFGLTTNIINGGLECGIPGD 238
Query: 203 GAVNARVNYYKDYCRQFGVSPGGNLYC 229
G VN R+ +++ Y F V+ G NL C
Sbjct: 239 GRVNDRIGFFQRYTGLFKVATGPNLDC 265
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 162 bits (411), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 123/233 (52%), Gaps = 36/233 (15%)
Query: 31 VVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVT 90
+ + F + +K++ C + FYT +F+ AA+S+ GF K+E+AAFF +
Sbjct: 90 ISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTS 149
Query: 91 HETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNF 137
HET C+ E N A+ DYC+ S WPC GK+YYGRGP+Q+SWN+
Sbjct: 150 HETTGGWATAPDGPYSWGYCFKQEQNPAS-DYCEPS-ATWPCASGKRYYGRGPMQLSWNY 207
Query: 138 NYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMS---------- 181
NYG G+ IG D L +PD VA D I+FK A+WFWM + H V++
Sbjct: 208 NYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADR 267
Query: 182 -----QGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
G+G ING LEC G V R+ +Y+ YC FGV+PGGNL C
Sbjct: 268 AAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC 320
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 127/237 (53%), Gaps = 36/237 (15%)
Query: 28 VESVVTEAFFNGI-KNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 86
+ S+V ++ I ++ N C K FY ++F+ A RS+ F + +RE+AAF
Sbjct: 38 IMSLVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFL 97
Query: 87 AHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQI 133
A ++HET +C+ E++ +YCD SNK WPC GK Y GRGP+Q+
Sbjct: 98 AQISHETTGGWATAPDGPYAWGLCFKEEVS-PQSNYCDASNKDWPCVSGKSYKGRGPIQL 156
Query: 134 SWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVM------- 180
SWN+NYG AG+ +GFDGL++P+ VA + ++FKTALWFWM + H VM
Sbjct: 157 SWNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPT 216
Query: 181 --------SQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 229
+ G+G ING LEC G V RV Y++ Y + F V+ G NL C
Sbjct: 217 KADRAANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDC 273
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 10/203 (4%)
Query: 28 VESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFA 87
+E+V+T A F+ I ++ + C+ K FYT ++F+ A +S+ + +KREIAA A
Sbjct: 80 IETVITSALFDSIMSKVESNCSAKGFYTYEAFITAFKSFGAYKGKV----AKREIAAILA 135
Query: 88 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQ-ISWNFNYGPAGKNI 146
H ++ + CY EI +N YC KS K++PC+PGK YYGRG LQ I+WN YG AGK++
Sbjct: 136 HFSYGSKSFCYKEEI--SNERYCSKS-KKYPCEPGKNYYGRGLLQSITWNEYYG-AGKHL 191
Query: 147 GFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVN 206
G L+DPD V++ P ++FK A+WFW NV + GFG + ++G EC
Sbjct: 192 GLPLLKDPDLVSRSPEVAFKFAMWFWNRNVRPALYLGFGEITKRVDGR-ECGNWRRDDTK 250
Query: 207 ARVNYYKDYCRQFGVSPGGNLYC 229
+V Y ++C GV+P L C
Sbjct: 251 NKVKQYIEFCEMLGVTPDQGLDC 273
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 39/207 (18%)
Query: 53 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMC 97
F+ QSF+ AA + GF ++E+AAF HV +T +C
Sbjct: 86 FWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKTSCGYGVATGGPLAWGLC 145
Query: 98 YINEINGANMDYCDKSNK-QWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDK 156
Y E++ YCD+S K ++PC PG +YYGRG L I WNFNYG AG+ + D L P+
Sbjct: 146 YNREMSPMQ-SYCDESWKFKYPCSPGAEYYGRGALPIYWNFNYGAAGEALKADLLNHPEY 204
Query: 157 VAQDPTISFKTALWFWMNNVHQVMSQG----------------------FGATIRAINGA 194
+ Q+ T++F+ A+W WM + + FG+T+ + G
Sbjct: 205 IEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLSKRGPTFGSTMNVLYGE 264
Query: 195 LECNGKNPGAVNARVNYYKDYCRQFGV 221
C + +N +++Y + G+
Sbjct: 265 YTCGQGSIDPMNNIISHYLYFLDLMGI 291
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 40/208 (19%)
Query: 53 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMC 97
F+ +SF+ AA Y GF +E+AAF HV +T +C
Sbjct: 109 FWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLC 168
Query: 98 YINEINGANMDYCDKSNK-QWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDK 156
Y E++ + YCD K +PC PG Y+GRG L + WN+NYG G+ + D L P+
Sbjct: 169 YNKEMSPDQL-YCDDYYKLTYPCTPGVSYHGRGALPVYWNYNYGQTGEALKVDLLSHPEY 227
Query: 157 VAQDPTISFKTALWFWMN-------NVHQVM---------------SQGFGATIRAINGA 194
+ + T++F+ A+W WM + H V + GFGATI + G
Sbjct: 228 LENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAAKRTPGFGATINVLYGD 287
Query: 195 LECN-GKNPGAVNARVNYYKDYCRQFGV 221
CN G + +N V++Y Y GV
Sbjct: 288 QICNSGFDNDEMNNIVSHYLYYLDLIGV 315
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,363,394
Number of extensions: 222780
Number of successful extensions: 420
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 14
Length of query: 229
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 134
Effective length of database: 8,502,049
Effective search space: 1139274566
Effective search space used: 1139274566
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)