BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0486600 Os04g0486600|AK064960
(337 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339 587 e-168
AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339 583 e-167
AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421 479 e-136
AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423 478 e-135
AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448 268 3e-72
AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400 248 3e-66
AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397 245 3e-65
>AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339
Length = 338
Score = 587 bits (1513), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/331 (86%), Positives = 301/331 (90%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
KI+IGINGFGRIGRLVARV LQ DDVELVAVNDPFITT+YMTYMFKYD+VHGQWKHHE+K
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELK 64
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
VKD KTLLFGEK VTVFG RNPE+IPWGE GA+FVVESTGVFT VV
Sbjct: 65 VKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPSKDAPMFVVGVNE EYK D+DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH+
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDV 244
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLTVRLEK A+YD+IK AIKEESEGK+KGILGY E+D+VSTDF GDNRSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
IAL+D FVKLVSWYDNEWGYSSRVVDLI HM
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339
Length = 338
Score = 583 bits (1502), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/331 (85%), Positives = 300/331 (90%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
KI+IGINGFGRIGRLVARV LQ DDVELVAVNDPFITT+YMTYMFKYD+VHGQWKH+E+K
Sbjct: 5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELK 64
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
+KD KTLLFGEK VTVFG RNPE+IPW E GA++VVESTGVFT VV
Sbjct: 65 IKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVV 124
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPSKDAPMFVVGVNE EYK D+DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVH+
Sbjct: 125 ISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 184
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
ITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGM+FRVPTVDV
Sbjct: 185 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDV 244
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLTVRLEK A+YD+IK AIKEESEGKLKGILGY E+D+VSTDF GDNRSSIFDAKAG
Sbjct: 245 SVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAG 304
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
IAL+D FVKLVSWYDNEWGYSSRVVDLI HM
Sbjct: 305 IALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421
Length = 420
Score = 479 bits (1234), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/331 (70%), Positives = 264/331 (79%), Gaps = 1/331 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A DD+E+VAVNDPFI YM YMFKYD+ HG +K +
Sbjct: 84 KTKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKG-TIN 142
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+V V R+P EIPW + GAE+VVES+GVFT V+
Sbjct: 143 VIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVI 202
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNEK Y P++DIVSNASCTTNCLAPLAKV+++ FGI+EGLMTTVHA
Sbjct: 203 ISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHA 262
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 263 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 322
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLT RLEK ASY+ +KAAIK SEG L+GILGY EED+VS DF GD+RSSIFDA AG
Sbjct: 323 SVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDSRSSIFDANAG 382
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
I L+ +F+KLVSWYDNEWGYS+RV+DLI HM
Sbjct: 383 IGLSKSFMKLVSWYDNEWGYSNRVLDLIEHM 413
>AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423
Length = 422
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/331 (70%), Positives = 263/331 (79%), Gaps = 1/331 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A DD+E+VAVNDPFI YM YM KYD+ HG +K +
Sbjct: 86 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKG-SIN 144
Query: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+V V R+P EIPW + GA++VVES+GVFT V+
Sbjct: 145 VIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVI 204
Query: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNE Y+P++DIVSNASCTTNCLAPLAKV+++ FGI+EGLMTTVHA
Sbjct: 205 ISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHA 264
Query: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS KDWRGGR AS NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 265 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSNV 324
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
SVVDLT RLEK ASY+ +KAAIK SEG LKGILGY +ED+VS DF GD+RSSIFDA AG
Sbjct: 325 SVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDANAG 384
Query: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
I L+ +FVKLVSWYDNEWGYS+RV+DLI HM
Sbjct: 385 IGLSKSFVKLVSWYDNEWGYSNRVLDLIEHM 415
>AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448
Length = 447
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 218/335 (65%), Gaps = 9/335 (2%)
Query: 1 MAKIKIGINGFGRIGRLVARV--ALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKH 58
+AK+K+ INGFGRIGR R + +E+V +ND + +++ KYD++ G +K
Sbjct: 79 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKN-ASHLLKYDSMLGTFKA 137
Query: 59 HEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXX 118
EVK+ D++T+ K + V R+P ++PW E G + V+E TGVF
Sbjct: 138 -EVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 196
Query: 119 XXVVISAPSK--DAPMFVVGVNEKEYKPDI-DIVSNASCTTNCLAPLAKVINDRFGIVEG 175
V+I+AP+K D P +V+GVNE++Y D+ +I+SNASCTTNCLAP AKV+++ FGIV+G
Sbjct: 197 SKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVKG 256
Query: 176 LMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAF 235
MTT H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A
Sbjct: 257 TMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIAL 315
Query: 236 RVPTVDVSVVDLTVRLEKPA-SYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRS 294
RVPT +VSVVDL + +EK + + + A ++ + G +KGIL + LVS DF+ + S
Sbjct: 316 RVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVS 375
Query: 295 SIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
+ D+ + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct: 376 TTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 410
>AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400
Length = 399
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/331 (45%), Positives = 206/331 (62%), Gaps = 6/331 (1%)
Query: 2 AKIKIGINGFGRIGRLVARV--ALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHH 59
AKIK+ INGFGRIGR R + +++V +ND +++ KYD+ G +
Sbjct: 63 AKIKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIF-DA 120
Query: 60 EVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXX 119
+VK L K + + RNP +PWGE G + V+E TGVF
Sbjct: 121 DVKPSGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAK 180
Query: 120 XVVISAPSK-DAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
V+I+AP K D P +VVGVN + Y + I+SNASCTTNCLAP KV++ +FGI++G MT
Sbjct: 181 KVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMT 240
Query: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
T H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVP
Sbjct: 241 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 299
Query: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFD 298
T +VSVVDL V++ K +++ AA ++ +E +LKGIL +E LVS DF+ + SS D
Sbjct: 300 TPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTID 359
Query: 299 AKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
+ + + D+ VK+++WYDNEWGYS RVVDL
Sbjct: 360 SSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 390
>AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397
Length = 396
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 205/331 (61%), Gaps = 6/331 (1%)
Query: 2 AKIKIGINGFGRIGRLVARV--ALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHH 59
AK+K+ INGFGRIGR R + ++++A+ND +++ KYD+ G +
Sbjct: 60 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIF-DA 117
Query: 60 EVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTXXXXXXXXXXXXXX 119
+VK + K + V RNP +PW E G + V+E TGVF
Sbjct: 118 DVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAK 177
Query: 120 XVVISAPSK-DAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
V+I+AP K D P +VVGVN Y D I+SNASCTTNCLAP KV++ +FGI++G MT
Sbjct: 178 KVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMT 237
Query: 179 TVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
T H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVP
Sbjct: 238 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 296
Query: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFD 298
T +VSVVDL V++ K +++ AA ++ +E +LKGIL +E LVS DF+ + S+ D
Sbjct: 297 TPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTID 356
Query: 299 AKAGIALNDNFVKLVSWYDNEWGYSSRVVDL 329
+ + + D+ VK+++WYDNEWGYS RVVDL
Sbjct: 357 SSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,958,650
Number of extensions: 280930
Number of successful extensions: 697
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 684
Number of HSP's successfully gapped: 7
Length of query: 337
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 238
Effective length of database: 8,392,385
Effective search space: 1997387630
Effective search space used: 1997387630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)