BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0481900 Os04g0481900|Os04g0481900
(345 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55350.1 | chr5:22442356-22443393 REVERSE LENGTH=346 144 1e-34
AT5G55360.1 | chr5:22443724-22444752 REVERSE LENGTH=343 137 8e-33
AT5G55340.1 | chr5:22439985-22440986 REVERSE LENGTH=334 135 5e-32
AT5G55380.1 | chr5:22446846-22447871 REVERSE LENGTH=342 126 2e-29
AT3G51970.1 | chr3:19284420-19285457 FORWARD LENGTH=346 125 2e-29
AT1G34520.1 | chr1:12623477-12624487 FORWARD LENGTH=337 122 2e-28
AT5G55370.1 | chr5:22445085-22446116 REVERSE LENGTH=344 120 8e-28
AT1G34500.1 | chr1:12611638-12612663 FORWARD LENGTH=342 119 3e-27
AT5G51420.1 | chr5:20885419-20886726 REVERSE LENGTH=436 115 3e-26
AT5G55320.1 | chr5:22435680-22436699 REVERSE LENGTH=340 112 4e-25
AT5G55330.1 | chr5:22437825-22438865 REVERSE LENGTH=347 107 1e-23
AT1G34490.1 | chr1:12609482-12610495 FORWARD LENGTH=338 86 4e-17
>AT5G55350.1 | chr5:22442356-22443393 REVERSE LENGTH=346
Length = 345
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 123/262 (46%), Gaps = 16/262 (6%)
Query: 82 QGPLDPS-LPLPAFVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLYRYKE 139
QGPL P L FV FP++ Q++P G AV A ++ +Y YK+
Sbjct: 81 QGPLFPVPSNLSRFVCFTCFPIKLQQNPKPQNQMPKWG---FAVKLAFFGVLLHMYEYKQ 137
Query: 140 RMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWGRRWN 199
M+P LLVLYSLH + DLEP F+ PYLS L+DFWGRRWN
Sbjct: 138 HMSPTVLLVLYSLHIYLEYEILLAPLKVLLSISLWCDLEPHFNEPYLSTSLQDFWGRRWN 197
Query: 200 LSVPAVLRPCVSHPXXXX---XXXXXXXXXXXXXXXXXXXXXMHELMFYYITLRPPTGEA 256
L VPA+LRP V P +HEL+F+Y T PTGE
Sbjct: 198 LMVPAILRPAVYLPVRQMAGRKMNSDQALFLGVFASFLVSGVVHELIFFYFTRESPTGEV 257
Query: 257 TAFFTLHGALAVAEGWWAAREG-----WPRPPRPVATALTLALVMSTGFWLFFPPITRAG 311
T FF LHG AE AA+ W + + V+ LT+ V+ TG WLFFP + R+G
Sbjct: 258 TLFFVLHGVCTAAEC--AAKRTRLVRRW-KVSQMVSRLLTVGFVVMTGGWLFFPHLARSG 314
Query: 312 ADKVVIAESEAVVAFVRDTGIW 333
+ + E+ + FV+ +
Sbjct: 315 MIERLADEAFLFIGFVKHKFFY 336
>AT5G55360.1 | chr5:22443724-22444752 REVERSE LENGTH=343
Length = 342
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 82 QGPLDPSLP--LPAFVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLYRYK 138
QGPL P LP L F+ I FP++ Q++P N + A+ + ++ +Y YK
Sbjct: 81 QGPLSP-LPRTLSRFICITCFPIKPQQNP--NIQNYKIPIWLFAIKVVIFVVLLQMYEYK 137
Query: 139 ERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWGRRW 198
+ ++P LLV SLH +G DLEPQ + PYL+ L+DFWGRRW
Sbjct: 138 QYLSPALLLVFNSLHIFLELEIVFMLVKALVFITLGCDLEPQSNEPYLATSLQDFWGRRW 197
Query: 199 NLSVPAVLRPCVSHP---XXXXXXXXXXXXXXXXXXXXXXXXXMHELMFYYITLRPPTGE 255
NL VPA+LRP V P +HE++F+Y+T PTGE
Sbjct: 198 NLMVPAILRPAVYLPARRMACRKVNSDQAMFLGVFAAFLVSGAVHEMLFFYLTREVPTGE 257
Query: 256 ATAFFTLHGALAVAEGWWAAREG-----WPRPPRPVATALTLALVMSTGFWLFFPPITRA 310
T FF LHG VAE A ++ W R V+ LT+ V+ T W FFP I R+
Sbjct: 258 VTWFFLLHGVCTVAEV--AVKKSTFVRRWWRVSPTVSRLLTVGFVVVTSGWFFFPLI-RS 314
Query: 311 GADKVVIAESEAVVAFVR 328
G + + +E+ + FV+
Sbjct: 315 GIIERLASEALMCIDFVK 332
>AT5G55340.1 | chr5:22439985-22440986 REVERSE LENGTH=334
Length = 333
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 82 QGPLDPSLP--LPAFVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLYRYK 138
+GPL P +P P F FP++ Q++P + + L + A+ A+ A ++ LY Y+
Sbjct: 81 KGPLIP-IPTNFPRFFCFTCFPIKVQQNP---KSQNHLPKLVFAIKLAIFAVLLHLYSYR 136
Query: 139 ERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWGRRW 198
+ ++P LL LY +H +G DLEPQ ++PYL+ L+DFWGRRW
Sbjct: 137 QNLSPTILLGLYFVHLYLEIEIILTFVKVVVFISLGCDLEPQSNKPYLATSLQDFWGRRW 196
Query: 199 NLSVPAVLRPCVSHPXXXXXXXXXXX---XXXXXXXXXXXXXXMHELMFYYITLRPPTGE 255
NL VPA+LRP V P +HEL+F+Y+ PTGE
Sbjct: 197 NLMVPAILRPAVYAPMRRVSERKMSSGWALFPGILAAFIVSGLVHELLFFYLIREMPTGE 256
Query: 256 ATAFFTLHGA-----LAVAEGWWAAREGWPRPPRPVATALTLALVMSTGFWLFFPPITRA 310
T FF LHG LAV + A+ W P V+ LT+ V TG WLF P + R+
Sbjct: 257 VTLFFVLHGVCTAVELAVKKKTTVAQR-WRLSP-GVSRVLTVGFVFVTGGWLFTPQLKRS 314
Query: 311 GADKVVIAESEAVVAFVR 328
G + +E+ +V F++
Sbjct: 315 GVMERFTSEAVLLVEFIK 332
>AT5G55380.1 | chr5:22446846-22447871 REVERSE LENGTH=342
Length = 341
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 115/254 (45%), Gaps = 13/254 (5%)
Query: 82 QGPLDPSLP-LPAFVAIATFPVRQR-DPTKNAAGSGLGPV-----TSAVMAALLAAIVSL 134
+GPL P P L F+ A P++ R DP+ NA L P AV +L ++ +
Sbjct: 81 EGPLFPLPPKLSRFICFACLPIKIRQDPSPNAI-PNLHPKPMPKWVLAVKILVLGVLLHV 139
Query: 135 YRYKERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFW 194
Y Y++ + + +L LY LH +G ++EP F+ PYL+ L+DFW
Sbjct: 140 YEYRDGLPRFVVLALYCLHIYLEVELVLVFVGAVVSTLLGCNIEPVFNEPYLATSLQDFW 199
Query: 195 GRRWNLSVPAVLRPCVSHPXXXXXXXXXX---XXXXXXXXXXXXXXXMHELMFYYITLRP 251
RRWNL V AVLR V P MHEL+++Y+ +P
Sbjct: 200 SRRWNLMVSAVLRSTVHIPVQRFFKRILSPDGAMFAGVMASFFVSGLMHELLYFYMIRKP 259
Query: 252 PTGEATAFFTLHGALAVAEGWWAAREGWPRPP-RPVATALTLALVMSTGFWLFFPPITRA 310
PT E T FF LHGA A A R W RPP R V+ + L V TG WLF + R
Sbjct: 260 PTWEVTCFFVLHGA-ATATEIAVKRTQWLRPPHRAVSGLVVLTFVSVTGVWLFLAQVLRN 318
Query: 311 GADKVVIAESEAVV 324
+ I E V+
Sbjct: 319 NVHEKAIGECLLVL 332
>AT3G51970.1 | chr3:19284420-19285457 FORWARD LENGTH=346
Length = 345
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 11/257 (4%)
Query: 81 GQGPLDPS---LPLPAFVAIATFPVRQR---DPTKNAA--GSGLGPVTSAVMAALLAAIV 132
G+GPL + L LP F+A++ P++ + PTK + GS GP+ + A + I+
Sbjct: 76 GRGPLSSNHKPLSLPIFLAVSCLPIKIQLSPKPTKTHSHEGSTEGPLIYTIKAVFVVLII 135
Query: 133 SLYRYKERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRD 192
Y Y ++ +L LY++H ++LEPQF++PYL+ L+D
Sbjct: 136 KAYEYSTKLPEKVVLTLYAIHIYFALEIILAATAAAVRAMSDLELEPQFNKPYLATSLQD 195
Query: 193 FWGRRWNLSVPAVLRPCVSHPXXXXXXXX--XXXXXXXXXXXXXXXXXMHELMFYYITLR 250
FWGRRWNL V +LRP V P MHEL+F+Y+
Sbjct: 196 FWGRRWNLMVTGILRPTVYEPSLQLFSVLGPNYSQILAAFGTFVVSGIMHELIFFYMGRL 255
Query: 251 PPTGEATAFFTLHGALAVAE-GWWAAREGWPRPPRPVATALTLALVMSTGFWLFFPPITR 309
P + FF ++G E G R P+ ++ LTL VM T WLF P R
Sbjct: 256 RPDWKMMWFFLINGFCTTVEIAIKKTINGRWRFPKAISQVLTLTFVMVTALWLFLPEFNR 315
Query: 310 AGADKVVIAESEAVVAF 326
+ + E A+ AF
Sbjct: 316 CNIVEKALDEYAAIGAF 332
>AT1G34520.1 | chr1:12623477-12624487 FORWARD LENGTH=337
Length = 336
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 81 GQGPLDPSLPLPA----FVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLY 135
+GPL LPLPA F+ P++ Q++P + + L AA+ +++++
Sbjct: 80 DKGPL---LPLPANLFRFICFTCLPIKIQKNPN---SQNHLPKWVFFCKAAIFGVLLNVH 133
Query: 136 RYKERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWG 195
YK + P L+ LY LH +G DLEP F+ PYL+ L+DFWG
Sbjct: 134 NYKSSLPPILLICLYPLHLYLVLDVLLTIVNALLTIILGCDLEPHFNEPYLATSLQDFWG 193
Query: 196 RRWNLSVPAVLRPCVSHPXXXXXXXXXXXXXXXXX---XXXXXXXXMHELMFYYITLRPP 252
RRWNL VPA+ RP V HP +HEL+++YI P
Sbjct: 194 RRWNLMVPAIFRPGVYHPMRSVCQPQMRSDWARFMGCWTTFFVSGLIHELVYFYINRETP 253
Query: 253 TGEATAFFTLHGALAVAEGWWAAREGWPRPPRPVATALTLALVMSTGFWLFFPPITRAGA 312
T E T FF L G E + W P ++ +T+ ++ TG++LFF I R+
Sbjct: 254 TWEVTWFFVLQGVCTAMEKAVKRKTRWSLSPM-LSRLITVGFLVVTGYFLFFRQIERSNM 312
Query: 313 DKVVIAESEAVVAFVR 328
+ E+ ++ FV+
Sbjct: 313 LERRATEASLIIDFVK 328
>AT5G55370.1 | chr5:22445085-22446116 REVERSE LENGTH=344
Length = 343
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 129/283 (45%), Gaps = 16/283 (5%)
Query: 58 HPRAISGXXXXXXXXXXXXXXXSGQGPLDPSLP--LPAFVAIATFPVR-QRDPTKNAAGS 114
H ISG Q PL P LP L F A FP++ ++P+ N +
Sbjct: 57 HFCVISGFFFTWLANFKLFLFAFDQEPLSP-LPSNLTRFFCFACFPIKINKNPSSNRIHN 115
Query: 115 GLGPVTSAVMA---ALLAAIVSLYR--YKERMNPYALLVLYSLHXXXXXXXXXXXXXXXX 169
P++ V+A + + ++ +YR Y ++ +A L L+++H
Sbjct: 116 K--PMSKWVLAFKLLIFSFLLHVYRNNYDSGLSRFAFLALFTIHVYLEAELILVFVGALM 173
Query: 170 XXXMGMDLEPQFDRPYLSAHLRDFWGRRWNLSVPAVLRPCVSHPXXXX---XXXXXXXXX 226
+G ++EP F+ PYL+ L++FW RRWNL VPAVLRP V P
Sbjct: 174 SMLLGCEMEPVFNDPYLATSLQEFWSRRWNLMVPAVLRPAVHIPVQRFCAPLLGLHRAFY 233
Query: 227 XXXXXXXXXXXXMHELMFYYITLRPPTGEATAFFTLHGALAVAEGWWAAREGWPRPPRPV 286
MHEL+++Y+ + PT E T FF LHG + E P P R V
Sbjct: 234 AGMLATFIVSGLMHELIYFYVIRKSPTWEVTCFFLLHGVVTCLEIAMKRMRWLPTPRRAV 293
Query: 287 A-TALTLALVMSTGFWLFFPPITRAGADKVVIAESEAVVAFVR 328
+ A+T+ L+++ G WLF+P + R K VI+E V+ V+
Sbjct: 294 SGLAITVFLLVTAG-WLFYPQMLRNDVHKRVISECLLVIDVVK 335
>AT1G34500.1 | chr1:12611638-12612663 FORWARD LENGTH=342
Length = 341
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 112/262 (42%), Gaps = 22/262 (8%)
Query: 82 QGPLDPSLP-LPAFVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLYRYKE 139
QGPL P P L FV FP++ QR+P + + A+ + ++ +Y Y
Sbjct: 81 QGPLFPVAPNLIQFVCFTCFPIKLQRNPKSQPSQNHFHKRAFAIKIMIFGVVLHVYNYSH 140
Query: 140 RMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWGRRWN 199
+ LL L LH +G DLEPQF++PYL+ L+DFWGRRWN
Sbjct: 141 FLPQTVLLSLCFLHLYVELEILLGPLKVLLSMALGCDLEPQFNKPYLATSLQDFWGRRWN 200
Query: 200 LSVPAVLRPCVSHPXXXXXXXXXXX---XXXXXXXXXXXXXXMHELMFYYITLRPPTGEA 256
L V +VLR + +P HEL+++YIT PT E
Sbjct: 201 LMVSSVLRSGIYNPVRCACQRPMNSGWARFMGYLVTFLVSGLFHELVYFYITRETPTWEV 260
Query: 257 TAFFTLHGAL----------AVAEGWWAAREGWPRPPRPVATALTLALVMSTGFWLFFPP 306
T FF L+G A + WW R V+ LT+ V+ TG LFFP
Sbjct: 261 TLFFVLNGVCTGTEVAVKRTAFLQRWWPVRSS-------VSRLLTMGFVVVTGGLLFFPL 313
Query: 307 ITRAGADKVVIAESEAVVAFVR 328
R+G + E+ + FV+
Sbjct: 314 FIRSGMMERRANETLFFLDFVK 335
>AT5G51420.1 | chr5:20885419-20886726 REVERSE LENGTH=436
Length = 435
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 112/267 (41%), Gaps = 19/267 (7%)
Query: 81 GQGPLDPSLP--LPAFVAIATFPVR-QRDPTKNAAG-------SGLGPVTSAVMAALLAA 130
QGPL P LP L F+ A FP++ Q++P + L +L+
Sbjct: 80 NQGPLFP-LPSNLTRFICFACFPIKLQQNPKRRDYFFQWEYPIEVLFSNQFVTKVVILSV 138
Query: 131 IVSLYRYKERMNPYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHL 190
++ +Y + + + P L VLY LH + +LEPQ + PYL+ L
Sbjct: 139 VLHMYNHIQHIYPIVLFVLYPLHLYLVLEILLKLFNAFFSIALDCELEPQLNEPYLAYSL 198
Query: 191 RDFWGRRWNLSVPAVLRPCVS---HPXXXXXXXXXXXXXXXXXXXXXXXXXMHELMFYYI 247
RDFWG W L +P +L P V +HE +F+YI
Sbjct: 199 RDFWGHWWTLMLPTILLPDVYARMRRITEGKMNSENALYLGVFVTFLVSGALHEFLFFYI 258
Query: 248 TLRPPTGEATAFFTLHGALAVAEGWWAARE-----GWPRPPRPVATALTLALVMSTGFWL 302
T PTGE T FF LHG VA ++ G+ P + + + V+ T WL
Sbjct: 259 TRERPTGEVTLFFVLHGVCIVAYDARLKKKIARWIGFEFCPCLILQVMVMGFVVVTAGWL 318
Query: 303 FFPPITRAGADKVVIAESEAVVAFVRD 329
FFPP+ R G + E+ + FVR+
Sbjct: 319 FFPPLVRTGKIQRFANEALLFIGFVRN 345
>AT5G55320.1 | chr5:22435680-22436699 REVERSE LENGTH=340
Length = 339
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 114/263 (43%), Gaps = 24/263 (9%)
Query: 81 GQGPLDPSLPLPA----FVAIATFPV-RQRDP-TKNAAGSGLGPVTSAVMAALLAAIVSL 134
QGPL PLP+ F FP+ RQ++P +++ + + PV A+ LL
Sbjct: 80 DQGPL---FPLPSNLFRFTCFTCFPIQRQQNPKSQDHLSTYVFPVKIAIFVVLL------ 130
Query: 135 YRYKERMN--PYALLVLYSLHXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRD 192
Y + + N LL L+ L+ +G DLEP F PYL+ L+D
Sbjct: 131 YVHNDIQNLPRTFLLCLHPLYVYLLLEILLTLLRILMTIILGCDLEPHFHEPYLATSLQD 190
Query: 193 FWGRRWNLSVPAVLRPCVSHPXXXXXXXXXXXXXXXXX---XXXXXXXXMHELMFYYITL 249
FWGRRWNL V A LR V P HE++F+YIT
Sbjct: 191 FWGRRWNLIVSASLRAIVYTPVRRVCQRVMSSDYAMLIGVFATFVTSGVAHEVVFFYITR 250
Query: 250 RPPTGEATAFFTLHGALAVAEGWWAAREGWPR--PPRPVAT-ALTLALVMSTGFWLFFPP 306
PTGE FF LHG VAE A R + R P RPV + T+A V T WLFFP
Sbjct: 251 AMPTGEVALFFLLHGVCTVAEV-AAKRTAFVRRWPVRPVVSWMFTIAFVNVTAGWLFFPQ 309
Query: 307 ITRAGADKVVIAESEAVVAFVRD 329
+ R + E ++ F R
Sbjct: 310 LIRNNLGERCSNEISLLIDFFRS 332
>AT5G55330.1 | chr5:22437825-22438865 REVERSE LENGTH=347
Length = 346
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 103/239 (43%), Gaps = 7/239 (2%)
Query: 94 FVAIATFPVR-QRDPTKNAAGSGLGPVTSAVMAALLAAIVSLYRYKERMNPYALLVLYSL 152
FV A FP++ Q+ P V + + A ++ Y YK+ ++ LL LY+L
Sbjct: 94 FVCFACFPIKLQKKPNPENTNHFPKWVFALKVFIFGALLLQAYHYKQFLSTNFLLGLYAL 153
Query: 153 HXXXXXXXXXXXXXXXXXXXMGMDLEPQFDRPYLSAHLRDFWGRRWNLSVPAVLRPCVSH 212
H +G DLEPQF+ PYL+ L DFWG RWNL V +L V +
Sbjct: 154 HIYLELEISLTLIKFLVSITLGCDLEPQFNEPYLATSLHDFWGHRWNLMVSKILWLAVYN 213
Query: 213 PXXXXXXXXXXXXXXXXXXXXXXXXXM-HELMFYYITLRPPTGEATAFFTLHGALAVAEG 271
P + HE++++Y+T PT E T FF LHG AE
Sbjct: 214 PIRQWRAKSSEWDRFFAIFATFLVSGVAHEILYFYLTREKPTWEVTWFFVLHGFCMAAEV 273
Query: 272 WWAAR----EGWPRPPRPVATALTLALVMSTGFWLFFPPITRAGADKVVIAESEAVVAF 326
+ + WP P V+ LT+ V TG WLF P R G + I E ++ F
Sbjct: 274 ALKRKTKLVQRWPVNP-AVSRLLTVGFVFVTGVWLFSPQPIRHGLMERFINEDLFLIDF 331
>AT1G34490.1 | chr1:12609482-12610495 FORWARD LENGTH=338
Length = 337
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Query: 176 DLEPQFDRPYLSAHLRDFWGRRWNLSVPAVLRPCVSHPXXXXXXXXXXX---XXXXXXXX 232
DLEP F+ PYL+ L+DFWG RWNL V A+ RP V P
Sbjct: 174 DLEPHFNEPYLATSLQDFWGHRWNLMVSAIYRPGVYSPVRSVCQHQMRSDWARFMGCMTT 233
Query: 233 XXXXXXMHELMFYYITLRPPTGEATAFFTLHGALAVAEGWWAAREGWPRPPRPVATALTL 292
+HEL+++YI PT E T FF LHG E + W P + +T+
Sbjct: 234 FFVSGLIHELVYFYINREKPTLEVTWFFVLHGVCTAMEIAVKRKMQWSLSPM-LLRLITV 292
Query: 293 ALVMSTGFWLFFPPITRAGADKVVIAESEAVVAFVR 328
++ TG LFF I R+ + E+ + FV+
Sbjct: 293 GFLVVTGDLLFFGQIERSNMLERRANEASLFIDFVK 328
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.137 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,026,085
Number of extensions: 157595
Number of successful extensions: 394
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 370
Number of HSP's successfully gapped: 20
Length of query: 345
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 246
Effective length of database: 8,392,385
Effective search space: 2064526710
Effective search space used: 2064526710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)