BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0481600 Os04g0481600|J065166H17
(470 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24530.1 | chr1:8693287-8694543 FORWARD LENGTH=419 166 2e-41
AT1G24130.1 | chr1:8534183-8535430 REVERSE LENGTH=416 130 2e-30
AT5G50120.1 | chr5:20382630-20383796 REVERSE LENGTH=389 124 1e-28
AT2G26490.1 | chr2:11268035-11269432 FORWARD LENGTH=466 117 1e-26
AT3G18950.1 | chr3:6536900-6538321 FORWARD LENGTH=474 105 5e-23
AT3G50390.1 | chr3:18702137-18703546 FORWARD LENGTH=470 102 3e-22
AT1G49450.1 | chr1:18305684-18307099 FORWARD LENGTH=472 95 1e-19
AT4G34380.1 | chr4:16438835-16440322 FORWARD LENGTH=496 87 2e-17
AT1G47610.1 | chr1:17504836-17505891 FORWARD LENGTH=352 84 1e-16
AT3G51930.1 | chr3:19271672-19272919 FORWARD LENGTH=416 82 9e-16
>AT1G24530.1 | chr1:8693287-8694543 FORWARD LENGTH=419
Length = 418
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 150/317 (47%), Gaps = 36/317 (11%)
Query: 150 AGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLRRFPVPSNH 209
+G+VK V G+ T HQDG++ +W++++ T++DRLRRF +P N+
Sbjct: 125 SGTVKSVGF--SGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLP--TLNDRLRRFALPKNY 180
Query: 210 VTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQSLPXXXXXX 269
V VRRH +RLWIEH ++SVSWDKTLK+W LRC +S+
Sbjct: 181 VQVRRHKKRLWIEHADAVTALAVSDG--FIYSVSWDKTLKIWRASDLRCKESIKAHDDAV 238
Query: 270 XXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLSRHXXXXXX 329
GTVYT SAD G+K + LVATL +H
Sbjct: 239 NAIAVSTNGTVYTGSADRRIRVWAKPT------------GEK-RHTLVATLEKHKSAVNA 285
Query: 330 XXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXXXXXXXXXX 389
G VL+SG DR ++VWERED++++M GALRGH +
Sbjct: 286 LALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDK------AILSLFNVSDLL 339
Query: 390 XXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTAQKKRRADDDGGDEEWR 449
+TVR WRRG D Y C+ V+ GH V+S+AA +++ DD
Sbjct: 340 LSGSADRTVRIWRRGPDS-SYSCLEVLSGHTKPVKSLAAV-----REKELDD-----VVS 388
Query: 450 VCSASFDGEVRLWSLRV 466
+ S S DGEV+ W + V
Sbjct: 389 IISGSLDGEVKCWKVSV 405
>AT1G24130.1 | chr1:8534183-8535430 REVERSE LENGTH=416
Length = 415
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 39/345 (11%)
Query: 133 FTMEATSTSDMADDTSAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRM---SSXXXXXXXX 189
F+ E ++ D + G VK + L G ++ HQD ++R+W++ S+
Sbjct: 100 FSPEYSTGDDRNVVANGNGGVKSLVIL--GDKLISAHQDHKIRVWKIIDESNRRGQKYKC 157
Query: 190 XXXXXTVSDRLRRFPVPSNHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLK 249
T++DR + ++V VRRH + W+ H LL+S SWD++ K
Sbjct: 158 VATLPTMNDRFKTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFK 217
Query: 250 VWAVPSLRCLQSLPXX-XXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXX 308
+W +CL S+ G VYT SAD
Sbjct: 218 IWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNK-------------- 263
Query: 309 GKKPAYHLVATLSRHXXXXXXXXXGCGGQVLYSGGNDRCVVVWER----EDSASHMVAVG 364
K + LVATL++H G+VLYSG DR ++VWER +D HM VG
Sbjct: 264 -KDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVG 322
Query: 365 ALRGHRRXXXXXXXXXXXXXXXXXXXXXXXXQTVRAWRRG-ADGRGYYCVAVIDGHGSAV 423
ALRGHR+ +++R WRRG + GY C+AV++GH V
Sbjct: 323 ALRGHRK------AIMCLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPV 376
Query: 424 RSVAAALVTAQKKRRADDDGGDEEWRVCSASFDGEVRLWSLRVAA 468
+S+A ++ + V S S D +++W+LRV++
Sbjct: 377 KSLAVSVSDSDSNSDY-------SCMVYSGSLDLSLKVWNLRVSS 414
>AT5G50120.1 | chr5:20382630-20383796 REVERSE LENGTH=389
Length = 388
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 143/341 (41%), Gaps = 33/341 (9%)
Query: 136 EATSTSD-MADDTSAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXX-----XXXX 189
EA+S D + + G+VK + L T HQD ++R+W+++
Sbjct: 73 EASSNGDVITGERGGGGAVKSLVIL--ADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMH 130
Query: 190 XXXXXTVSDRLRRFPVPSNHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLK 249
T+SDR + +P N V +RRH + W+ H LL+SVSWD+TLK
Sbjct: 131 LATMPTISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLK 190
Query: 250 VWAVPSLRCLQSLPXX-XXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXX 308
+W +CL+S G +YT S+D
Sbjct: 191 IWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVK------ 244
Query: 309 GKKPAYHLVATLSRHXX-XXXXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALR 367
KK + LVA LS H G G +L+SGG+D ++VWER+D +V VG LR
Sbjct: 245 -KKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGD-IVVVGMLR 302
Query: 368 GHRRXXXXXXXXXXXXXXXXXXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVA 427
GH +TVR W+ A + Y C+A+++GH V+ +
Sbjct: 303 GHTE------SVLCLAVVSDILCSGSADKTVRLWKCSA--KDYSCLAMLEGHLGPVKCLT 354
Query: 428 AALVTAQKKRRADDDGGDEEWRVCSASFDGEVRLWSLRVAA 468
A + R+AD + + + S D +V++W + V A
Sbjct: 355 GAF---RDSRKAD----EASYHIYSGGLDSQVKVWQVLVPA 388
>AT2G26490.1 | chr2:11268035-11269432 FORWARD LENGTH=466
Length = 465
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 30/315 (9%)
Query: 150 AGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLRRFPVPSNH 209
+G VK + + G+ TGHQDG++R+W++S T+ D + P N+
Sbjct: 134 SGLVKAI--VISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNY 191
Query: 210 VTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQSLPXXXXXX 269
V V++H LWI+H LL+S SWD+T+KVW + +CL+S+P
Sbjct: 192 VEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAV 251
Query: 270 XXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLSRHXXXXXX 329
V++ SAD GK + L+ TL++
Sbjct: 252 NSVVSTTEAIVFSGSAD-----------GTVKAWKRDQQGKYTKHTLMQTLTKQESAVTA 300
Query: 330 XXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXXXXXXXXXX 389
G +Y G +D V WERE ++ G L+GH+
Sbjct: 301 LAVSKNGAAVYFGSSDGLVNFWEREKQLNYG---GILKGHK------LAVLCLEVAGSLV 351
Query: 390 XXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTAQKKRRADDDGGDEEWR 449
+T+ W+R DG + C++V+ GH V+ +A +RR D++W
Sbjct: 352 FSGSADKTICVWKR--DGNIHTCLSVLTGHTGPVKCLAVEADREASERR------DKKWI 403
Query: 450 VCSASFDGEVRLWSL 464
V S S D V++W +
Sbjct: 404 VYSGSLDKSVKVWGV 418
>AT3G18950.1 | chr3:6536900-6538321 FORWARD LENGTH=474
Length = 473
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 129/332 (38%), Gaps = 29/332 (8%)
Query: 142 DMADDT---SAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSD 198
D+ D T S +G VK + + G TGHQDG++R+WR S T+ +
Sbjct: 165 DLKDHTGFKSTSGLVKAIV-ITGDNRIFTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLKE 223
Query: 199 RLRRFPVPSNHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRC 258
L + P N+V VRR L I H LL+S SWDKTLKVW + +C
Sbjct: 224 FLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKC 283
Query: 259 LQSLPXXXXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVA 318
L+S+ ++T SAD GK + LV
Sbjct: 284 LESIQAHDDAINTVAAGFDDLLFTGSAD-----------GTLKVWKRELQGKGTKHFLVN 332
Query: 319 TLSRHXXXXXXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXX 378
L + V+Y G +D V WE + SH G LRGHR
Sbjct: 333 VLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHG---GTLRGHR------LA 383
Query: 379 XXXXXXXXXXXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTAQKKRR 438
+ + WRR DG + C++V+ H V+ + A + R
Sbjct: 384 VLCLAAAGSLVLSGGADKNICVWRRNGDG-SHSCLSVLMDHVGPVKCLTAVEDDGEGHRE 442
Query: 439 ADDDGGDEEWRVCSASFDGEVRLWSLRVAAAS 470
GD++W V S S D V++W + +A++
Sbjct: 443 K----GDQKWIVYSGSLDKSVKVWRVTESAST 470
>AT3G50390.1 | chr3:18702137-18703546 FORWARD LENGTH=470
Length = 469
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 126/326 (38%), Gaps = 34/326 (10%)
Query: 148 SAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLRRFPVPS 207
S +G VK + + G TGHQDG++R+W+ +S + D +R VPS
Sbjct: 134 SNSGLVKAI--VLAGDKIFTGHQDGKIRVWKAASKESNVHRRVGTMPNLLDYIRNSIVPS 191
Query: 208 NHVTVRRHHRR---LWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQSLPX 264
++ R +R L H RLL+S SWDKT KVW V LRC++S+
Sbjct: 192 SYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNA 251
Query: 265 XXXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLSRHX 324
G V+T SAD K + TL +
Sbjct: 252 HEDAVNAVVSGFDGLVFTGSAD-----------GTVKVWRREDQAKDTKHFFSETLLKQD 300
Query: 325 XXXXXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXXXXX 384
++Y G +D V WERE+ +M G L+GH+
Sbjct: 301 CAVTAIAVDQSATLVYCGSSDGTVNFWEREN---NMKNGGVLKGHKLAVLCLVAAGNLMF 357
Query: 385 XXXXXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTAQKKRRADDDGG 444
+R WRR G + C++V+ GH V+ +A +R + G
Sbjct: 358 SGSADLG------IRVWRRPEGGGEHVCLSVLTGHAGPVKCLAV-------ERDQESVSG 404
Query: 445 DEEWRVCSASFDGEVRLWSLRVAAAS 470
+ W V S S D V++W RV+ +S
Sbjct: 405 ERRWIVYSGSLDRSVKMW--RVSESS 428
>AT1G49450.1 | chr1:18305684-18307099 FORWARD LENGTH=472
Length = 471
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 122/323 (37%), Gaps = 24/323 (7%)
Query: 142 DMADDTSAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLR 201
D + S +G VK + + TGHQDG++R+WR S T+ + L
Sbjct: 164 DFSGFKSTSGFVKAIVVTRDNRV-FTGHQDGKIRVWRGSKKNPEKYSRVGSLPTLKEFLT 222
Query: 202 RFPVPSNHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQS 261
+ P N+V VRR L I H LL+S SWDKTLKVW + +CL+S
Sbjct: 223 KSVNPRNYVEVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLES 282
Query: 262 LPXXXXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLS 321
+ V+T SAD GK+ + LV L
Sbjct: 283 IEAHDDAVNTVVSGFDDLVFTGSAD-----------GTLKVWKREVQGKEMKHVLVQVLM 331
Query: 322 RHXXXXXXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXX 381
+ V+Y G +D V WER+ +H G + GHR
Sbjct: 332 KQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHK---GTIHGHR------MAVLC 382
Query: 382 XXXXXXXXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTAQ--KKRRA 439
+ + W+R DG + C++V+ H V+ +AA +
Sbjct: 383 LATAGSLLLSGGADKNICVWKRNGDG-SHTCLSVLMDHEGPVKCLAAVEEAEEDHNDGDD 441
Query: 440 DDDGGDEEWRVCSASFDGEVRLW 462
+ GD+ W V S S D V++W
Sbjct: 442 GGEKGDQRWIVYSGSLDNSVKVW 464
>AT4G34380.1 | chr4:16438835-16440322 FORWARD LENGTH=496
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 117/316 (37%), Gaps = 23/316 (7%)
Query: 148 SAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLRRFPVPS 207
S++G +K + G TGHQDG++R+W++S T ++ P
Sbjct: 161 SSSGLIKAIVIF--GDRIFTGHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPK 218
Query: 208 NHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQSLPXXXX 267
+ + VRR+ + +H LL+S SWD T+KVW + +CL+S+
Sbjct: 219 HFMEVRRNRNSVKTKHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDD 278
Query: 268 XXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLSRHXXXX 327
V+T SAD GK + L L +
Sbjct: 279 AINSVMSGFDDLVFTGSAD-----------GTVKVWKRELQGKGTKHTLAQVLLKQENAV 327
Query: 328 XXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXXXXXXXX 387
++Y G +D V WER + G L+GH+
Sbjct: 328 TALAVKSQSSIVYCGSSDGLVNYWER---SKRSFTGGILKGHK------SAVLCLGIAGN 378
Query: 388 XXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVAAALVTA-QKKRRADDDGGDE 446
+ + WRR + + C++V+ GH V+ +A A + +A GD
Sbjct: 379 LLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACHQGAKASVAEGDR 438
Query: 447 EWRVCSASFDGEVRLW 462
+W + S S D V++W
Sbjct: 439 KWIIYSGSLDKSVKVW 454
>AT1G47610.1 | chr1:17504836-17505891 FORWARD LENGTH=352
Length = 351
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 108/280 (38%), Gaps = 24/280 (8%)
Query: 148 SAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXXXXXXXXTVSDRLRRFPVPS 207
S +G VK + K TGHQDG++R+W+ SS + D L+ PS
Sbjct: 60 SNSGLVKAIVISREAKV-FTGHQDGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPS 118
Query: 208 NHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLKVWAVPSLRCLQSLPXXXX 267
N+V VRR LWI+H LL+S SWD+T+KVW + L+C++S+
Sbjct: 119 NYVEVRRCRTALWIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIK-AHD 177
Query: 268 XXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXGKKPAYHLVATLSRHXXXX 327
V+T SAD GK+ A+ L TL +
Sbjct: 178 DAVNSVTTAESLVFTGSAD-----------GTVKVWKREIRGKRTAHSLFQTLLKQESAV 226
Query: 328 XXXXXGCGGQVLYSGGNDRCVVVWEREDSASHMVAVGALRGHRRXXXXXXXXXXXXXXXX 387
+YSG +D V WE D + + HR
Sbjct: 227 TALVT--SHMAVYSGSSDGAVNFWEMGDK-KLLKHCEVFKKHR------LAVLCIAAAGK 277
Query: 388 XXXXXXXXQTVRAWRRGADGRGYYCVAVIDGHGSAVRSVA 427
+ + WRR +G+ + CV+V+ GH V+ +A
Sbjct: 278 LLFSGAADKKICVWRR--EGKVHTCVSVLTGHTGPVKCLA 315
>AT3G51930.1 | chr3:19271672-19272919 FORWARD LENGTH=416
Length = 415
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 92/227 (40%), Gaps = 10/227 (4%)
Query: 131 DVFTMEATSTSDMADDTSAAGSVKCVAHLHGGKAAVTGHQDGRLRLWRMSSXXXXXXX-X 189
D+ + A GSVK + + G T HQD R+R+W++S
Sbjct: 82 DIIVWQQPDLKIFAKFGQGDGSVKALVSV--GSKVFTAHQDSRIRVWKVSRRNSENAFRL 139
Query: 190 XXXXXTVSDRLRRFPVPSNHVTVRRHHRRLWIEHXXXXXXXXXXXXXRLLFSVSWDKTLK 249
T D L +F SN+V RR+H+RLWIEH +++S SWDKTLK
Sbjct: 140 VDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCLAVHAG--IIYSGSWDKTLK 197
Query: 250 VWAVPSLRCLQSLPXXXXXXXXXXXXXXGTVYTASADXXXXXXXXXXXXXXXXXXXXXXG 309
VW + L+CL+S+ G VY+ASAD
Sbjct: 198 VWRLSDLKCLESIK-AHDDAINGLVAGDGRVYSASADGKVKIWGKEKRKQIESTSSS--- 253
Query: 310 KKPAYHLVATLSRHXXXXXXXXXGCG-GQVLYSGGNDRCVVVWERED 355
+ L ATL G G +Y GG+D V+ WE+++
Sbjct: 254 SSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKE 300
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.131 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,233,129
Number of extensions: 173002
Number of successful extensions: 835
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 777
Number of HSP's successfully gapped: 10
Length of query: 470
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 368
Effective length of database: 8,310,137
Effective search space: 3058130416
Effective search space used: 3058130416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)