BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0477500 Os04g0477500|AK067372
(388 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G27540.1 | chr3:10205489-10206888 FORWARD LENGTH=391 602 e-173
AT5G14480.1 | chr5:4667984-4669693 FORWARD LENGTH=388 602 e-172
AT1G12990.1 | chr1:4433973-4435552 FORWARD LENGTH=393 587 e-168
AT3G01620.1 | chr3:235327-236729 REVERSE LENGTH=389 582 e-166
AT1G67880.1 | chr1:25454081-25455453 REVERSE LENGTH=391 548 e-156
AT2G13290.1 | chr2:5512058-5513143 FORWARD LENGTH=362 423 e-119
AT3G26445.1 | chr3:9680120-9680746 REVERSE LENGTH=119 112 2e-25
>AT3G27540.1 | chr3:10205489-10206888 FORWARD LENGTH=391
Length = 390
Score = 602 bits (1553), Expect = e-173, Method: Compositional matrix adjust.
Identities = 277/382 (72%), Positives = 325/382 (85%), Gaps = 1/382 (0%)
Query: 5 GPYGHKKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMIYAHG 64
G KKTD IC+ VCG+ SKA T+SRL+C L+GFD R L L + +P IL IY HG
Sbjct: 4 GYINSKKTDDICEDVCGQ-GSKAAKTISRLKCVLKGFDLRTYLFLFVLMPFGILAIYLHG 62
Query: 65 QKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELD 124
QK TYF RP+WESPPKPF+TIPHYY+ENVTM LC LHGW +R++PRRVFDAVLFSNE D
Sbjct: 63 QKFTYFFRPLWESPPKPFQTIPHYYNENVTMESLCSLHGWGIRDSPRRVFDAVLFSNEKD 122
Query: 125 ILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGRFVKG 184
+L +RWNEL PYV++FV+LESNSTFTGL KPL FK N+ +F F E RLTYG IGGRF KG
Sbjct: 123 LLTVRWNELYPYVTQFVILESNSTFTGLPKPLVFKSNKDQFKFVEPRLTYGTIGGRFRKG 182
Query: 185 ENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQL 244
ENPFVEE+YQRVALDQL++IA I++DDLLIMSDVDEIPS HTI+LLRWCDDIP +LHLQL
Sbjct: 183 ENPFVEEAYQRVALDQLLRIAGIQEDDLLIMSDVDEIPSAHTINLLRWCDDIPPVLHLQL 242
Query: 245 RNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDFAFK 304
+NYLYSFE+++D KSWRASIHRY GKTRYAHFRQ++ +LADSGWHCSFCFRYIS+F FK
Sbjct: 243 KNYLYSFEYYVDSKSWRASIHRYSPGKTRYAHFRQSNVMLADSGWHCSFCFRYISEFIFK 302
Query: 305 MQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVHL 364
M+AYSH DR+RF ++LNP RIQDVIC+G DLFDMLPEEYTF+EII K+GP+P ++SAVHL
Sbjct: 303 MKAYSHSDRVRFSHYLNPRRIQDVICKGTDLFDMLPEEYTFKEIIGKMGPVPRSYSAVHL 362
Query: 365 PSYLLQNVDRYRYLLPGYCRRE 386
PSYLL N ++Y+YLLPG C RE
Sbjct: 363 PSYLLYNAEQYKYLLPGNCIRE 384
>AT5G14480.1 | chr5:4667984-4669693 FORWARD LENGTH=388
Length = 387
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 275/384 (71%), Positives = 325/384 (84%)
Query: 5 GPYGHKKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMIYAHG 64
G Y KKTD ICD VCG+ S+A SR+RC LRGFDF+ + VPI I +Y HG
Sbjct: 4 GYYSSKKTDDICDDVCGQDGSRAAKAFSRVRCVLRGFDFKTYIFFFTIVPIFIFGVYLHG 63
Query: 65 QKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELD 124
QK+TYFLRP+WESPPKPF+T+PHYYHEN +MA LC LHGWK RE+PRRVFDAVLFSNE+D
Sbjct: 64 QKLTYFLRPLWESPPKPFQTLPHYYHENASMATLCSLHGWKHRESPRRVFDAVLFSNEVD 123
Query: 125 ILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGRFVKG 184
+L IRW EL PY+++FV+LESNSTFTGL KPL F NR +F FAE RL+YG I GRF KG
Sbjct: 124 MLTIRWKELYPYITQFVILESNSTFTGLPKPLVFNGNRAKFEFAEPRLSYGNIAGRFKKG 183
Query: 185 ENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQL 244
ENPFVEE+YQR+ALDQLI++A IE+DDLLIMSDVDEIPS HTI+LLRWCD P ILHLQL
Sbjct: 184 ENPFVEEAYQRIALDQLIRLAGIEEDDLLIMSDVDEIPSAHTINLLRWCDGYPPILHLQL 243
Query: 245 RNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDFAFK 304
+NYLYSFE+F+D+KSWRASIH+Y+ GKTRYAHFRQ + LLADSGWHCSFCFR+IS+F FK
Sbjct: 244 KNYLYSFEYFVDNKSWRASIHQYKPGKTRYAHFRQGNTLLADSGWHCSFCFRHISEFIFK 303
Query: 305 MQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVHL 364
M+AYSH DR+RF ++LNP+RIQDVIC+G DLFDMLPEEYTF+EII KLGPIP ++SAVHL
Sbjct: 304 MKAYSHNDRVRFSHYLNPKRIQDVICKGTDLFDMLPEEYTFREIIGKLGPIPRSYSAVHL 363
Query: 365 PSYLLQNVDRYRYLLPGYCRRESG 388
P++L++ + Y+YLLPG C RESG
Sbjct: 364 PAHLIEKAESYKYLLPGNCIRESG 387
>AT1G12990.1 | chr1:4433973-4435552 FORWARD LENGTH=393
Length = 392
Score = 587 bits (1514), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/383 (71%), Positives = 323/383 (84%), Gaps = 1/383 (0%)
Query: 5 GPYGHKKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMIYAHG 64
G Y KKTD IC GVC + + + SRL CALRG D + + LL+ VP +L Y HG
Sbjct: 10 GHYCSKKTDDICGGVCSQEPGR-FFSFSRLCCALRGVDMKTYIFLLVIVPTCVLAGYVHG 68
Query: 65 QKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELD 124
QK++YFLRP+WESPPKPF IPHYYHEN +M LCKLHGW VR+ PRRV+DAVLFSNELD
Sbjct: 69 QKISYFLRPLWESPPKPFHDIPHYYHENASMETLCKLHGWGVRDYPRRVYDAVLFSNELD 128
Query: 125 ILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGRFVKG 184
IL +RW EL PY+++FVLLESN+TFTGL KPL F +R F F ESRLTYG +GGRFVKG
Sbjct: 129 ILAVRWRELFPYITQFVLLESNTTFTGLPKPLVFAAHRDEFKFIESRLTYGTVGGRFVKG 188
Query: 185 ENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQL 244
+NPF EE+YQRVALDQL++IA I DDDLL+MSDVDEIPS HTI+LLRWCD+IP+ILHL+L
Sbjct: 189 QNPFYEEAYQRVALDQLLRIAGITDDDLLLMSDVDEIPSRHTINLLRWCDEIPKILHLRL 248
Query: 245 RNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDFAFK 304
+NYLYSFEF +D+KSWRASIHRY +GKTRYAH+RQ+DE+LAD+GWHCSFCFR IS+F FK
Sbjct: 249 KNYLYSFEFLVDNKSWRASIHRYETGKTRYAHYRQSDEILADAGWHCSFCFRRISEFIFK 308
Query: 305 MQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVHL 364
M+AYSH DR+RF +FLNP+R+Q VIC+GADLFDMLPEEYTF+EII K+GPIP +FSAVHL
Sbjct: 309 MKAYSHNDRVRFGHFLNPKRVQRVICKGADLFDMLPEEYTFKEIIGKMGPIPHSFSAVHL 368
Query: 365 PSYLLQNVDRYRYLLPGYCRRES 387
PSYLL+N D+YR+LLPG C RES
Sbjct: 369 PSYLLENADKYRFLLPGNCIRES 391
>AT3G01620.1 | chr3:235327-236729 REVERSE LENGTH=389
Length = 388
Score = 582 bits (1500), Expect = e-166, Method: Compositional matrix adjust.
Identities = 269/380 (70%), Positives = 321/380 (84%), Gaps = 1/380 (0%)
Query: 10 KKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMIYAHGQKVTY 69
KKTD IC+ VCG+ S+A +SRLRC LRG DF+ L L +P+ I IY HGQK+TY
Sbjct: 9 KKTDTICEDVCGQEGSRAGKAISRLRCVLRGLDFKTFLFLFTLLPLFIFGIYLHGQKITY 68
Query: 70 FLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELDILEIR 129
FLRP+WESPPKPF +PHYYHEN +M LC LHGWK+RE+PRRVFDA LFSNE+D+L +R
Sbjct: 69 FLRPLWESPPKPFNILPHYYHENTSMELLCNLHGWKLRESPRRVFDAALFSNEIDMLTLR 128
Query: 130 WNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHR-FGFAESRLTYGMIGGRFVKGENPF 188
WNEL+PY+++FVLLESNSTFTGL K L F +NR + F F E RLTYG +GGRF KGENPF
Sbjct: 129 WNELNPYITQFVLLESNSTFTGLSKQLAFADNREKNFKFVEPRLTYGNVGGRFKKGENPF 188
Query: 189 VEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQLRNYL 248
VEES+QR+ALDQLIK+A I++DDLLIMSDVDEIPSGHTI+LLRWCD P ILHLQLRNYL
Sbjct: 189 VEESFQRLALDQLIKLAGIKEDDLLIMSDVDEIPSGHTINLLRWCDGFPPILHLQLRNYL 248
Query: 249 YSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDFAFKMQAY 308
YS+E+++D KSWRAS+H Y+ GKTR AHFRQ++ LL DSGWHCSFCFR+I+DF FKM+AY
Sbjct: 249 YSYEYYVDSKSWRASVHLYKPGKTRCAHFRQSNNLLTDSGWHCSFCFRHINDFVFKMKAY 308
Query: 309 SHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVHLPSYL 368
SH DR+RF ++LNP RIQD+IC+G DLFDMLPEE+TF+EII KLGPIP ++SAVHLP YL
Sbjct: 309 SHTDRVRFLHYLNPRRIQDIICKGTDLFDMLPEEHTFREIIGKLGPIPRSYSAVHLPGYL 368
Query: 369 LQNVDRYRYLLPGYCRRESG 388
+QN D Y+YLLPG C+RESG
Sbjct: 369 IQNADSYKYLLPGNCKRESG 388
>AT1G67880.1 | chr1:25454081-25455453 REVERSE LENGTH=391
Length = 390
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 256/383 (66%), Positives = 316/383 (82%), Gaps = 5/383 (1%)
Query: 5 GPYGHKKTDGICDGVCGEPASKAVLTMSRLRCALRGFDFRALLALLIGVPILILMIYAHG 64
G Y KK+D +C G S +SRL C LRG D +++L LL+ +P+ +L +Y +
Sbjct: 10 GHYCSKKSDDLC----GTQESDRGFGISRLCCILRGVDLKSVLFLLVIMPMCVLGVYINA 65
Query: 65 QKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVRETPRRVFDAVLFSNELD 124
K++YFLRP+WESPPKPF IPHY+HEN +M LCKLHGW+ RE PRRV+DAVLFS E++
Sbjct: 66 LKISYFLRPLWESPPKPFHEIPHYHHENASMESLCKLHGWRTREYPRRVYDAVLFSTEVE 125
Query: 125 ILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGFAESRLTYGMIGGRFVKG 184
+L IRW EL PYV++FVLLESNSTFTGL KPL F +R F F E RLTYG IGGRF KG
Sbjct: 126 LLTIRWKELYPYVTQFVLLESNSTFTGLPKPLVFAGHRDEFKFIEPRLTYGSIGGRFKKG 185
Query: 185 E-NPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQ 243
E NPF EE+YQR+ALDQL++IA I DDDLLIMSDVDEIPS HTI+LLRWCDDIP+ILHL+
Sbjct: 186 EKNPFYEEAYQRIALDQLLRIAGITDDDLLIMSDVDEIPSRHTINLLRWCDDIPQILHLR 245
Query: 244 LRNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDELLADSGWHCSFCFRYISDFAF 303
L+NYLYSFEF +DDKSWRAS+HRY++GKTRYAH+RQ+D +LADSGWHCSFCFR IS+F F
Sbjct: 246 LKNYLYSFEFPVDDKSWRASVHRYQTGKTRYAHYRQSDVILADSGWHCSFCFRRISEFVF 305
Query: 304 KMQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEYTFQEIIAKLGPIPSTFSAVH 363
KM+AYSH DR+RF ++LNP+R+Q VIC G+DLFDM+PEEYTF++II K+GPIP ++SAVH
Sbjct: 306 KMKAYSHYDRVRFAHYLNPKRVQRVICSGSDLFDMIPEEYTFKDIIGKMGPIPHSYSAVH 365
Query: 364 LPSYLLQNVDRYRYLLPGYCRRE 386
LP+YLL+N +RY++LLPG C R+
Sbjct: 366 LPAYLLENAERYKFLLPGNCLRD 388
>AT2G13290.1 | chr2:5512058-5513143 FORWARD LENGTH=362
Length = 361
Score = 423 bits (1088), Expect = e-119, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 258/343 (75%), Gaps = 4/343 (1%)
Query: 48 ALLIGVPILILMIYAHGQKVTYFLRPIWESPPKPFKTIPHYYHENVTMAKLCKLHGWKVR 107
L+I +L I + Q ++Y RP+W+ PP PFK IPHYY ENV+M LC+LHGW R
Sbjct: 18 TLIILFLTCLLCILTNFQTISYLFRPLWDKPPPPFKRIPHYYAENVSMGHLCELHGWTPR 77
Query: 108 ETPRRVFDAVLFSNELDILEIRWNELSPYVSEFVLLESNSTFTGLKKPLHFKENRHRFGF 167
PRRVFDA++FSNELD+LE+RW EL PYVS+FV+LESN+TFTG+ KPL F N+ RF F
Sbjct: 78 LEPRRVFDAIIFSNELDLLEVRWRELEPYVSKFVILESNTTFTGIPKPLFFDSNKERFAF 137
Query: 168 AESRLTYGMIGGRFVKG----ENPFVEESYQRVALDQLIKIAKIEDDDLLIMSDVDEIPS 223
AE ++ +G+ G+ E+PF+ E QRVA++ L++ A + D D +IMSD DEIPS
Sbjct: 138 AEGKIVHGVFPGKKRSTGQPYEDPFLLEGQQRVAMNWLLREAGVSDGDAVIMSDADEIPS 197
Query: 224 GHTIDLLRWCDDIPEILHLQLRNYLYSFEFFLDDKSWRASIHRYRSGKTRYAHFRQTDEL 283
HT+ L+WCD IP+++HL++R Y+YSFEF +D SWRAS+H Y T+Y H RQTD +
Sbjct: 198 PHTVKFLQWCDGIPDVMHLEMREYMYSFEFPVDYSSWRASVHIYSRKWTQYRHSRQTDLI 257
Query: 284 LADSGWHCSFCFRYISDFAFKMQAYSHVDRIRFKYFLNPERIQDVICRGADLFDMLPEEY 343
L+D+GWHCSFCFR +++F FKM+ YSH DR++ K FL+ +RIQ IC+G DLFDMLPE+Y
Sbjct: 258 LSDAGWHCSFCFRRLNEFVFKMKGYSHADRVKRKEFLDYQRIQKHICKGYDLFDMLPEKY 317
Query: 344 TFQEIIAKLGPIPSTFSAVHLPSYLLQNVDRYRYLLPGYCRRE 386
+FQE+I+K+GPIP + SAVHLP++L+QN R+R+LLPG C RE
Sbjct: 318 SFQELISKIGPIPPSASAVHLPAFLIQNAARFRFLLPGGCLRE 360
>AT3G26445.1 | chr3:9680120-9680746 REVERSE LENGTH=119
Length = 118
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 61/67 (91%)
Query: 211 DLLIMSDVDEIPSGHTIDLLRWCDDIPEILHLQLRNYLYSFEFFLDDKSWRASIHRYRSG 270
DLLIMSDVDEIPS HT++LLRWC++I +I HL+L+N LYSFEF LD+KSWRAS+HR++ G
Sbjct: 48 DLLIMSDVDEIPSRHTVNLLRWCNEITQIPHLRLKNSLYSFEFLLDNKSWRASVHRFQMG 107
Query: 271 KTRYAHF 277
KTRYAH+
Sbjct: 108 KTRYAHY 114
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.143 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,180,994
Number of extensions: 404386
Number of successful extensions: 1147
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1142
Number of HSP's successfully gapped: 7
Length of query: 388
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 288
Effective length of database: 8,364,969
Effective search space: 2409111072
Effective search space used: 2409111072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)