BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0459900 Os04g0459900|AK065850
(445 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39830.1 | chr5:15942883-15945676 FORWARD LENGTH=449 608 e-174
AT3G27925.1 | chr3:10366659-10368864 REVERSE LENGTH=440 292 3e-79
AT4G18370.1 | chr4:10149235-10151051 FORWARD LENGTH=324 193 1e-49
AT5G27660.1 | chr5:9789835-9792235 REVERSE LENGTH=429 109 3e-24
AT2G47940.1 | chr2:19618372-19622164 REVERSE LENGTH=608 60 3e-09
AT1G65630.1 | chr1:24406542-24409068 REVERSE LENGTH=560 59 4e-09
AT5G40560.1 | chr5:16244543-16246519 FORWARD LENGTH=411 55 6e-08
AT1G65640.1 | chr1:24411695-24413527 REVERSE LENGTH=437 53 3e-07
AT5G40200.1 | chr5:16070402-16073101 FORWARD LENGTH=593 50 3e-06
>AT5G39830.1 | chr5:15942883-15945676 FORWARD LENGTH=449
Length = 448
Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/392 (76%), Positives = 338/392 (86%), Gaps = 1/392 (0%)
Query: 54 EMSSKPVLLASRRKLVALSSFCFCLHSSRYFSALALGDPSV-KIDDVTPKIFPSGPLFPT 112
E++ K V +RR L+ C + SRY SALALGDPSV ++DV+P +FP+GPLFPT
Sbjct: 56 ELAVKSVPSTTRRILLTSLFMNLCFNPSRYLSALALGDPSVATVEDVSPTVFPAGPLFPT 115
Query: 113 EKRIAELFETNTYSVVNIFDATLRPQLNVTGVVEIPEGNGSGVVWDDSGHIVTNYHVVGN 172
E RI +LFE NTYSVVNIFD TLRPQL +TGVVEIPEGNGSGVVWD G+IVTNYHV+GN
Sbjct: 116 EGRIVQLFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGN 175
Query: 173 ALSKKPKPGEVVARVNILAADGIQKNFEGKLVGADRSKDLAVLKVDAPTDLLKPINVGQS 232
ALS+ P PG+VV RVNILA+DG+QKNFEGKLVGADR+KDLAVLKVDAP LLKPI VGQS
Sbjct: 176 ALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQS 235
Query: 233 SALRVGQQCLAIGNPFGFDHALTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGP 292
++L+VGQQCLAIGNPFGFDH LTVGVISGLNRDIFSQ GVTIGGGIQTDAAINPGNSGGP
Sbjct: 236 NSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNSGGP 295
Query: 293 LLDSKGHMIGINTAIFTQTGTSAGVGFAIPSSTVLKIAPQLIQFGKVRRAGLNVEFAPDP 352
LLDSKG++IGINTAIFTQTGTSAGVGFAIPSSTVLKI PQLIQF KV RAG+N+E APDP
Sbjct: 296 LLDSKGNLIGINTAIFTQTGTSAGVGFAIPSSTVLKIVPQLIQFSKVLRAGINIELAPDP 355
Query: 353 IAYQLNVRTGSLILQVPGGSAAAKAGLVPTSRGFAGNIVLGDVIVAVDGKPIKGKSDLSR 412
+A QLNVR G+L+LQVPG S A KAGL PTSRGFAGNIVLGD+IVAVD KP+K K++L +
Sbjct: 356 VANQLNVRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGDIIVAVDDKPVKNKAELMK 415
Query: 413 VLDDYGVGDKVSLTIQRGAETLEVTLPLEEAS 444
+LD+Y VGDKV+L I+RG E LE+ + LEE S
Sbjct: 416 ILDEYSVGDKVTLKIKRGNEDLELKISLEEKS 447
>AT3G27925.1 | chr3:10366659-10368864 REVERSE LENGTH=440
Length = 439
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/373 (47%), Positives = 227/373 (60%), Gaps = 25/373 (6%)
Query: 74 FCFCLHSSRYFSALALGDPSVKIDDV----TPKIFPSGPLFPTEKRIAELFETNTYSVVN 129
F C + FS A P+V+ TPK L E LF+ NT SVV
Sbjct: 81 FLLCTSVALSFSLFA-ASPAVESASAFVVSTPK-----KLQTDELATVRLFQENTPSVVY 134
Query: 130 IFDATLRPQLNVTGVVEIPEGNGSGVVWDDSGHIVTNYHVVGNALSKKPKPGEVVARVNI 189
I + +R V+E+P+G+GSG VWD GHIVTNYHV+ A + + +
Sbjct: 135 ITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGA-----------SDLRV 183
Query: 190 LAADGIQKNFEGKLVGADRSKDLAVLKVDAPTDLLKPINVGQSSALRVGQQCLAIGNPFG 249
AD Q F+ K+VG D+ KD+AVL++DAP + L+PI VG S+ L VGQ+ AIGNPFG
Sbjct: 184 TLAD--QTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFG 241
Query: 250 FDHALTVGVISGLNRDIFSQA-GVTIGGGIQTDAAINPGNSGGPLLDSKGHMIGINTAIF 308
DH LT GVISGL R+I S A G I IQTDAAINPGNSGGPLLDS G +IGINTAI+
Sbjct: 242 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIY 301
Query: 309 TQTGTSAGVGFAIPSSTVLKIAPQLIQFGKVRRAGLNVEFAPDPIAYQLNVRTGSLILQV 368
+ +G S+GVGF+IP TV I QL++FGKV R L ++FAPD QL V +G L+L
Sbjct: 302 SPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGV-SGVLVLDA 360
Query: 369 PGGSAAAKAGLVPTSRGFAGNIVLGDVIVAVDGKPIKGKSDLSRVLDDYGVGDKVSLTIQ 428
P A KAGL T R G +VLGD+I +V+G + SDL R+LD VGD+V++ +
Sbjct: 361 PPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVL 420
Query: 429 RGAETLEVTLPLE 441
RG ++++ LE
Sbjct: 421 RGDHKEKISVTLE 433
>AT4G18370.1 | chr4:10149235-10151051 FORWARD LENGTH=324
Length = 323
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 132/195 (67%), Gaps = 4/195 (2%)
Query: 149 EGNGSGVVWDDSGHIVTNYHVVGNALSKKPKPGEVVARVNILAADGIQKNFEGKLVGADR 208
EG GSG VWD GHIVTNYHV+ + + G +V+++ A G + + EGK+VG D
Sbjct: 128 EGTGSGFVWDKLGHIVTNYHVIAKLATDQF--GLQRCKVSLVDAKGTRFSKEGKIVGLDP 185
Query: 209 SKDLAVLKVDAPTDLLKPINVGQSSALRVGQQCLAIGNPFGFDHALTVGVISGLNRDIFS 268
DLAVLK++ L P+ +G S+ LRVGQ C AIGNP+G+++ LT+GV+SGL R+I S
Sbjct: 186 DNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPS 245
Query: 269 QAGVTIGGGIQTDAAINPGNSGGPLLDSKGHMIGINTAIFTQ--TGTSAGVGFAIPSSTV 326
G +I IQTDA IN GNSGGPLLDS GH IG+NTA FT+ +G S+GV FAIP TV
Sbjct: 246 PNGKSISEAIQTDADINSGNSGGPLLDSYGHTIGVNTATFTRKGSGMSSGVNFAIPIDTV 305
Query: 327 LKIAPQLIQFGKVRR 341
++ P LI +G R
Sbjct: 306 VRTVPYLIVYGTAYR 320
>AT5G27660.1 | chr5:9789835-9792235 REVERSE LENGTH=429
Length = 428
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 37/267 (13%)
Query: 152 GSGVVWDDSGHIVTNYHVVGNALSKKPKPGEVVARVNILAADGIQKNFEGKLVGADRSKD 211
GSG + D G I+T HVV + + + RV++ DG + FEG +V AD D
Sbjct: 149 GSGTIIDADGTILTCAHVVVDFQNIRHSSK---GRVDVTLQDG--RTFEGVVVNADLQSD 203
Query: 212 LAVLKVDAPTDLLKPINVGQSSALRVGQQCLAIGNPFGFDHALTVGVISGLNRDIFSQAG 271
+A++K+ + T L +G SS LR G +A+G P + +T G++S ++R +
Sbjct: 204 IALVKIKSKTPL-PTAKLGFSSKLRPGDWVIAVGCPLSLQNTVTAGIVSCVDR---KSSD 259
Query: 272 VTIGGG----IQTDAAINPGNSGGPLLDSKGHMIGINTAIFTQTGTSAGVGFAIPSSTVL 327
+ +GG +QTD +IN GNSGGPL++ G +IG+N + + G+GF++P +V
Sbjct: 260 LGLGGKHREYLQTDCSINAGNSGGPLVNLDGEVIGVN---IMKVLAADGLGFSVPIDSVS 316
Query: 328 KIAPQLIQFGKVRRA--GLNVEFAPDPIAYQL--------NVRTGSLILQVPGGSAAAKA 377
KI + G+V R GL + + I QL +V G L+ V GS A +A
Sbjct: 317 KIIEHFKKSGRVIRPWIGLKMVELNNLIVAQLKERDPMFPDVERGVLVPTVIPGSPADRA 376
Query: 378 GLVPTSRGFAGNIVLGDVIVAVDGKPI 404
G P GDV+V DGKP+
Sbjct: 377 GFKP-----------GDVVVRFDGKPV 392
>AT2G47940.1 | chr2:19618372-19622164 REVERSE LENGTH=608
Length = 607
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 161 GHIVTNYHVVGNALSKKPKPGEVVARVNILAADGIQKNFEGKLVGADRSKDLAVLKVDAP 220
G ++TN H V + K K G + + K++ D+A+L V++
Sbjct: 152 GKLLTNAHCVEHDTQVKVK------------RRGDDRKYVAKVLVRGVDCDIALLSVES- 198
Query: 221 TDLLK---PINVGQSSALRVGQQCLAIGNPFGFDH-ALTVGVISGLNRDIFSQAGVTIGG 276
D K P+ +G R+ +G P G D ++T GV+S + ++ G +
Sbjct: 199 EDFWKGAEPLRLGHLP--RLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSDLL 255
Query: 277 GIQTDAAINPGNSGGPLLDSKGHMIGINTAIFTQTGTSAGVGFAIPSSTV 326
GIQ DAAINPGNSGGP + +G IG+ ++ T +G+ IP++ V
Sbjct: 256 GIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETE-NIGYVIPTTVV 304
>AT1G65630.1 | chr1:24406542-24409068 REVERSE LENGTH=560
Length = 559
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 59/298 (19%)
Query: 126 SVVNIFDATLRPQLNVTGVVEI-PEGNGSGVVWDDSGHIVTNYHVVGNALSKKPKPGEVV 184
SVV +F + +P+L + + E GSG V I+TN HVV N S K
Sbjct: 96 SVVKVFTVSSKPRLFQPWQITMQSESTGSGFVIS-GKKILTNAHVVANQTSVK------- 147
Query: 185 ARVNILAADGIQKNFEGKLVGADRSKDLAVLKVDAPT--DLLKPINVGQSSALRVGQQCL 242
+ G ++ K+ DLA+L++D + + P+ +G +++
Sbjct: 148 -----VRKHGSTTKYKAKVQAVGHECDLAILEIDNDKFWEGMNPLELGDIPSMQ--DTVY 200
Query: 243 AIGNPFGFDH-ALTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSKGHMI 301
+G P G D +++ GV+S + +S +G + IQ DAAIN GNSGGP++ +
Sbjct: 201 VVGYPKGGDTISVSKGVVSRVGPIKYSHSGTELLA-IQIDAAINNGNSGGPVI------M 253
Query: 302 GINTA--IFTQTGTSAGVGFAIPSSTVLKIAPQLIQFGKVRRAGLNVEFAPDPIAYQL-- 357
G A F S +G+ IP+ + + +G +V F + YQ
Sbjct: 254 GNKVAGVAFESLCYSDSIGYIIPTPVIRHF------LNAIEESGEDVSFGSINLTYQKMD 307
Query: 358 -----------NVRTGSLILQVPGGSAAAKAGLVPTSRGFAGNIVLGDVIVAVDGKPI 404
+ TG LI ++ S K + D+I+A+DG PI
Sbjct: 308 NDQLRKDFKMSDKMTGILINKINPLSDVHKV------------LKKDDIILAIDGVPI 353
>AT5G40560.1 | chr5:16244543-16246519 FORWARD LENGTH=411
Length = 410
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 30/198 (15%)
Query: 163 IVTNYHVVGNALSKKPKPGEVVARVNILAADGIQKNFEGKLVGADRSKDLAVLKVDAPT- 221
I+TN HVV N + + ++ G K ++ ++ R DLA+L +++
Sbjct: 2 IITNAHVVANHI------------LVLVIKRGSPKKYKAEVKAIGRECDLAILVIESKEF 49
Query: 222 -DLLKPINVGQSSALRVGQQCLAIGNPFGFDH-ALTVGVISGLNRDIFSQAGVTIGGGIQ 279
+ + P+ +G L+ + IG P G ++ ++T GV+S + ++ + + IQ
Sbjct: 50 WEDMNPLELGDMPFLQ--ESVNVIGYPTGGENISVTKGVVSRIESMDYAHGAINLPA-IQ 106
Query: 280 TDAAINPGNSGGPLLDSKGHMIGINTAIFTQTGTSAGVGFAIPSSTVLKIAPQLIQF-GK 338
TDAA+NPGNSGGP+ ++G+ F G S +G IP AP + F
Sbjct: 107 TDAAMNPGNSGGPVCIG-NKVVGV---AFQTLGHSNNIGCLIP-------APVVKHFITG 155
Query: 339 VRRAGLNVEFAPDPIAYQ 356
V + G V F ++YQ
Sbjct: 156 VEKTGQYVGFCSLNLSYQ 173
>AT1G65640.1 | chr1:24411695-24413527 REVERSE LENGTH=437
Length = 436
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 32/209 (15%)
Query: 126 SVVNIFD-----ATLRPQLNVTGVVEIPEGNGSGVVWDDSGHIVTNYHVVGNALSKKPKP 180
SVV +F + L+P N E GSG V I+TN HVV + + + +
Sbjct: 74 SVVKVFTVYSMPSVLQPWRNWPQ----QESGGSGFVIS-GKKILTNAHVVADHIFLQVR- 127
Query: 181 GEVVARVNILAADGIQKNFEGKLVGADRSKDLAVLKVDAPT--DLLKPINVGQSSALRVG 238
G ++ ++ DLA+L++D + + P+ +G+ +L
Sbjct: 128 -----------KHGSPTKYKAQVRAIGHECDLAILEIDNEEFWEDMIPLELGEIPSL--D 174
Query: 239 QQCLAIGNPFGFDH-ALTVGVISGLNRDIFSQAGVTIGGGIQTDAAINPGNSGGPLLDSK 297
+ G P G D ++T G +S + ++ G T+ IQTDAAINPGNSGGP +
Sbjct: 175 ESVAVFGYPTGGDSVSITKGYVSRVEYTRYAHGGTTLLA-IQTDAAINPGNSGGPAIIG- 232
Query: 298 GHMIGINTAIFTQTGTSAGVGFAIPSSTV 326
M G+ F + ++ +G+ IP+ +
Sbjct: 233 NKMAGV---AFQKDPSADNIGYIIPTPVI 258
>AT5G40200.1 | chr5:16070402-16073101 FORWARD LENGTH=593
Length = 592
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 211 DLAVLKV--DAPTDLLKPINVGQSSALRVGQQCLAIGNPFGFDH-ALTVGVISGLNRDIF 267
D+A+L V D + + P+ G AL+ +G P G D ++T GV+S + +I
Sbjct: 200 DIALLTVTDDEFWEGVSPVEFGDLPALQ--DAVTVVGYPIGGDTISVTSGVVSRM--EIL 255
Query: 268 SQA-GVTIGGGIQTDAAINPGNSGGPLLDSKGHMIGINTAIFTQTGTSAGVGFAIPSSTV 326
S G T G+Q DAAIN GNSGGP + KG +GI + +G+ IP+ +
Sbjct: 256 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED-AENIGYVIPTPVI 314
Query: 327 LKI 329
+
Sbjct: 315 VHF 317
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,164,378
Number of extensions: 395037
Number of successful extensions: 933
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 918
Number of HSP's successfully gapped: 11
Length of query: 445
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 343
Effective length of database: 8,310,137
Effective search space: 2850376991
Effective search space used: 2850376991
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)