BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0459500 Os04g0459500|AK071685
(402 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397 600 e-172
AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400 599 e-172
AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448 489 e-138
AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423 283 1e-76
AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421 274 6e-74
AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339 265 3e-71
AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339 262 3e-70
>AT3G26650.1 | chr3:9795226-9796848 FORWARD LENGTH=397
Length = 396
Score = 600 bits (1547), Expect = e-172, Method: Compositional matrix adjust.
Identities = 296/366 (80%), Positives = 317/366 (86%), Gaps = 1/366 (0%)
Query: 37 TSDDFMNAVSFRTHAVGTSGGARRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDV 96
+SD+F++ VSF+T A+G+SGG R+ TEAKLKVAINGFGRIGRNFLRCWHGR DS PLD+
Sbjct: 32 SSDEFVSIVSFQTSAMGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDS-PLDI 90
Query: 97 IAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGEL 156
IAINDTGGVKQASHLLKYDSTLGIFDADVKP G+ AISVDGK+I+VVS+RNPS LPW EL
Sbjct: 91 IAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLPWKEL 150
Query: 157 GIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISN 216
GID+VIEGTGVFVDR+GAGKHI+AGAKKV+ITAPGKGDIPTYVVGVNAD YS DEPIISN
Sbjct: 151 GIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISN 210
Query: 217 ASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTS 276
ASCTTNCLAPFVK+LDQKFGIIKGTMTTTHSYTGDQ NIVPTS
Sbjct: 211 ASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTS 270
Query: 277 TGAAKAVALVLPNLKGKLNGIALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANEL 336
TGAAKAVALVLPNLKGKLNGIALRVPTPN SKKT AEEVN AFRDSA EL
Sbjct: 271 TGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKEL 330
Query: 337 KGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADI 396
KGIL+VCD PLVSVDFRCSD S TID+SL+MVMGDDMVKVIAWYDNEWGYSQRVVDLADI
Sbjct: 331 KGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADI 390
Query: 397 VANQWK 402
VAN WK
Sbjct: 391 VANNWK 396
>AT1G12900.1 | chr1:4392634-4394283 REVERSE LENGTH=400
Length = 399
Score = 599 bits (1544), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/367 (80%), Positives = 319/367 (86%), Gaps = 1/367 (0%)
Query: 36 ATSDDFMNAVSFRTHAVGTSGGARRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLD 95
++SD+F++ VSF+T A+ ++GG R+ TEAK+KVAINGFGRIGRNFLRCWHGR DS PLD
Sbjct: 34 SSSDEFVSFVSFQTSAMRSNGGYRKGVTEAKIKVAINGFGRIGRNFLRCWHGRKDS-PLD 92
Query: 96 VIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGE 155
V+ INDTGGVKQASHLLKYDSTLGIFDADVKP GD+A+SVDGK+IK+VSDRNPSNLPWGE
Sbjct: 93 VVVINDTGGVKQASHLLKYDSTLGIFDADVKPSGDSALSVDGKIIKIVSDRNPSNLPWGE 152
Query: 156 LGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIIS 215
LGIDLVIEGTGVFVDRDGAGKH+QAGAKKVLITAPGKGDIPTYVVGVNA+ YS ++ IIS
Sbjct: 153 LGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIIS 212
Query: 216 NASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPT 275
NASCTTNCLAPFVK+LDQKFGIIKGTMTTTHSYTGDQ NIVPT
Sbjct: 213 NASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT 272
Query: 276 STGAAKAVALVLPNLKGKLNGIALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANE 335
STGAAKAVALVLPNLKGKLNGIALRVPTPN SKKT AEEVN AFRD+A E
Sbjct: 273 STGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKE 332
Query: 336 LKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLAD 395
LKGIL+VCD PLVSVDFRCSDVS TID+SL+MVMGDDMVKVIAWYDNEWGYSQRVVDLAD
Sbjct: 333 LKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLAD 392
Query: 396 IVANQWK 402
IVAN WK
Sbjct: 393 IVANNWK 399
>AT1G42970.1 | chr1:16127552-16129584 FORWARD LENGTH=448
Length = 447
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/345 (71%), Positives = 275/345 (79%), Gaps = 4/345 (1%)
Query: 60 RAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTGGVKQASHLLKYDSTLG 119
R T AKLKVAINGFGRIGRNFLRCWHGR DS PL+V+ +ND+GGVK ASHLLKYDS LG
Sbjct: 75 RGETVAKLKVAINGFGRIGRNFLRCWHGRKDS-PLEVVVLNDSGGVKNASHLLKYDSMLG 133
Query: 120 IFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQ 179
F A+VK V + ISVDGK+IKVVS+R+P LPW ELGID+VIEGTGVFVD GAGKHIQ
Sbjct: 134 TFKAEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQ 193
Query: 180 AGAKKVLITAPGKG-DIPTYVVGVNADQYSPD-EPIISNASCTTNCLAPFVKILDQKFGI 237
AGA KV+ITAP KG DIPTYV+GVN Y D IISNASCTTNCLAPF K+LD++FGI
Sbjct: 194 AGASKVIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGI 253
Query: 238 IKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGI 297
+KGTMTTTHSYTGDQ NIVPTSTGAAKAV+LVLP LKGKLNGI
Sbjct: 254 VKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGI 313
Query: 298 ALRVPTPNXXXXXXXXXXSKKTL-AEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSD 356
ALRVPTPN KK L AE+VN+AFR +A +KGIL+VCD PLVSVDFRCSD
Sbjct: 314 ALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSD 373
Query: 357 VSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQW 401
VS TID+SL+MVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA++W
Sbjct: 374 VSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKW 418
>AT1G79530.1 | chr1:29916232-29919088 REVERSE LENGTH=423
Length = 422
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 203/342 (59%), Gaps = 6/342 (1%)
Query: 59 RRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDST 117
RR+ + K KV INGFGRIGR LR R D ++V+A+ND K +++LKYDST
Sbjct: 79 RRSSSSGKTKVGINGFGRIGRLVLRIATSRDD---IEVVAVNDPFIDAKYMAYMLKYDST 135
Query: 118 LGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKH 177
G F + + D+ + ++GK + VVS R+PS +PW +LG D V+E +GVF A H
Sbjct: 136 HGNFKGSINVIDDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASH 195
Query: 178 IQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGI 237
++ GAKKV+I+AP D P +VVGVN Y P+ I+SNASCTTNCLAP K++ ++FGI
Sbjct: 196 LKGGAKKVIISAP-SADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGI 254
Query: 238 IKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNG 296
++G MTT H+ T Q NI+P+STGAAKAV VLP L GKL G
Sbjct: 255 LEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTG 314
Query: 297 IALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSD 356
+A RVPT N K E+V A + ++ LKGIL D +VS DF
Sbjct: 315 MAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGYTDEDVVSNDFVGDS 374
Query: 357 VSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 398
S DA+ + + VK+++WYDNEWGYS RV+DL + +A
Sbjct: 375 RSSIFDANAGIGLSKSFVKLVSWYDNEWGYSNRVLDLIEHMA 416
>AT1G16300.1 | chr1:5574433-5577406 FORWARD LENGTH=421
Length = 420
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 203/342 (59%), Gaps = 6/342 (1%)
Query: 59 RRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDST 117
R+ + K KV INGFGRIGR LR R D ++V+A+ND K +++ KYDST
Sbjct: 77 HRSRSSGKTKVGINGFGRIGRLVLRIATFRDD---IEVVAVNDPFIDAKYMAYMFKYDST 133
Query: 118 LGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKH 177
G + + + D+ + ++GK +KVVS R+P+ +PW +LG + V+E +GVF A H
Sbjct: 134 HGNYKGTINVIDDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSH 193
Query: 178 IQAGAKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGI 237
++ GAKKV+I+AP D P +VVGVN Y P+ I+SNASCTTNCLAP K++ ++FGI
Sbjct: 194 LKGGAKKVIISAP-SADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGI 252
Query: 238 IKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNG 296
++G MTT H+ T Q NI+P+STGAAKAV VLP L GKL G
Sbjct: 253 LEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTG 312
Query: 297 IALRVPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSD 356
+A RVPTPN K E+V A + ++ L+GIL + +VS DF
Sbjct: 313 MAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGYTEEDVVSNDFLGDS 372
Query: 357 VSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 398
S DA+ + + +K+++WYDNEWGYS RV+DL + +A
Sbjct: 373 RSSIFDANAGIGLSKSFMKLVSWYDNEWGYSNRVLDLIEHMA 414
>AT1G13440.1 | chr1:4608465-4610494 REVERSE LENGTH=339
Length = 338
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 198/333 (59%), Gaps = 7/333 (2%)
Query: 64 EAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFD 122
+ K+++ INGFGRIGR R R D ++++A+ND + +++ KYDS G +
Sbjct: 3 DKKIRIGINGFGRIGRLVARVVLQRDD---VELVAVNDPFITTEYMTYMFKYDSVHGQWK 59
Query: 123 ADVKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAG 181
V D+ + G K + V RNP ++PWGE G D V+E TGVF D+D A H++ G
Sbjct: 60 HHELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGG 119
Query: 182 AKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGT 241
AKKV+I+AP K D P +VVGVN +Y D I+SNASCTTNCLAP K+++ +FGI++G
Sbjct: 120 AKKVVISAPSK-DAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGL 178
Query: 242 MTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALR 300
MTT HS T Q NI+P+STGAAKAV VLP+L GKL G++ R
Sbjct: 179 MTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFR 238
Query: 301 VPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT 360
VPT + K +E+ +A ++ + ++KGIL + +VS DF + S
Sbjct: 239 VPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSI 298
Query: 361 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
DA + + D VK+++WYDNEWGYS RVVDL
Sbjct: 299 FDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDL 331
>AT3G04120.1 | chr3:1081077-1083131 FORWARD LENGTH=339
Length = 338
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 196/333 (58%), Gaps = 7/333 (2%)
Query: 64 EAKLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFD 122
+ K+++ INGFGRIGR R R D ++++A+ND + +++ KYDS G +
Sbjct: 3 DKKIRIGINGFGRIGRLVARVVLQRDD---VELVAVNDPFITTEYMTYMFKYDSVHGQWK 59
Query: 123 ADVKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAG 181
+ + D + G K + V RNP ++PW E G D V+E TGVF D+D A H++ G
Sbjct: 60 HNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGG 119
Query: 182 AKKVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGT 241
AKKV+I+AP K D P +VVGVN +Y D I+SNASCTTNCLAP K+++ +FGI++G
Sbjct: 120 AKKVVISAPSK-DAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGL 178
Query: 242 MTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIALR 300
MTT HS T Q NI+P+STGAAKAV VLP L GKL G++ R
Sbjct: 179 MTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFR 238
Query: 301 VPTPNXXXXXXXXXXSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCT 360
VPT + K +E+ +A ++ + +LKGIL + +VS DF + S
Sbjct: 239 VPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSI 298
Query: 361 IDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
DA + + D VK+++WYDNEWGYS RVVDL
Sbjct: 299 FDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDL 331
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,713,298
Number of extensions: 315594
Number of successful extensions: 615
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 7
Length of query: 402
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 301
Effective length of database: 8,337,553
Effective search space: 2509603453
Effective search space used: 2509603453
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)