BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0449500 Os04g0449500|AK100347
(583 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37030.1 | chr4:17452150-17454629 FORWARD LENGTH=570 630 0.0
AT4G12680.1 | chr4:7475104-7478174 FORWARD LENGTH=576 405 e-113
AT5G40640.1 | chr5:16277345-16280258 FORWARD LENGTH=587 382 e-106
AT3G27390.1 | chr3:10133372-10136111 REVERSE LENGTH=589 364 e-101
>AT4G37030.1 | chr4:17452150-17454629 FORWARD LENGTH=570
Length = 569
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/548 (55%), Positives = 397/548 (72%), Gaps = 2/548 (0%)
Query: 23 LRVAYVVLSFCAAFFLGGIKAAVVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTER 82
L+++YV+ +FC+AFFLG IK +VGP+A +++GNVGVIL LFPAHV WTIY++ KT R
Sbjct: 12 LKISYVIFAFCSAFFLGAIKGLIVGPIAGLTLIVGNVGVILCLFPAHVTWTIYAVAKTNR 71
Query: 83 INAGLKLAVLIALPVXXXXXXXXXXXXSALVALGYGFFTPWIATFEAFRQESESKKFVHG 142
+ LK+A+L+ALP S LV +GYGFFTPWI+ FEAFRQ++ES KF H
Sbjct: 72 FDIPLKVAILVALPALFGIWLGLSLAISVLVGVGYGFFTPWISAFEAFRQDTESNKFFHC 131
Query: 143 VVDGTWGTIKGSCTVVRDFADLCFHSYPVYLKELRESSQNCEPHSIRVLDVPSCIAVGLL 202
+VDGTWGTIKGSC VV DFAD C+HSYP+YLKELRES + E ++R++ VP CI VG+L
Sbjct: 132 LVDGTWGTIKGSCIVVTDFADFCYHSYPLYLKELRESPVSDELQTLRLIHVPGCIIVGIL 191
Query: 203 GLIVDIPLYTVIALIKSPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVV 262
GL++DIPL+T IA+IKSPY+L KGW RL D I+REGPFLE C+P+AGL +L WP+VV+
Sbjct: 192 GLVIDIPLFTAIAVIKSPYLLLKGWYRLAQDAINREGPFLEIACIPVAGLTVLLWPIVVI 251
Query: 263 GSVLLAIVSSIFVGLYGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLXXX 322
G +L+ I SSIFVGLYGAVVV+QE+SF+RGVSYV+A+V EFDEYTNDWLYLREGT+
Sbjct: 252 GFILVTIFSSIFVGLYGAVVVFQERSFRRGVSYVIAVVGEFDEYTNDWLYLREGTIFPKP 311
Query: 323 XXXXXXXXXXTEFSVRTNAS-VKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIW 381
+E SV + S V + S +APAMLVP+L + SVREAIQEV+MVQIW
Sbjct: 312 RYRMGRGSFSSEVSVIVHPSDVTRVNSSGSVDAPAMLVPSLVHSVSVREAIQEVRMVQIW 371
Query: 382 ENMMKNCELRGRDLLNLNVITTVDLTEWLRTKESGHEA-IGLGVPSYSLLCMILHSIKAX 440
E+MM E++G++LL+ V+T DL E L+ + + I +G+PSY+LL +L SIKA
Sbjct: 372 EHMMGWFEMQGKELLDAEVLTPTDLYESLKGRHGNESSIINVGLPSYALLHTLLSSIKAG 431
Query: 441 XXXXXXXXXXXXXQYNRPQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNS 500
NRPQD+ +DW +P++VLKDQI+ALK+ E EV++LEK+ LF +
Sbjct: 432 VHGVLLLDGSEVTHLNRPQDKFLDWVFNPIMVLKDQIRALKLGESEVKYLEKVVLFGNHE 491
Query: 501 ERANGWDNGAEIPQDPVRAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEK 560
+R WDN + PQ+ +R QIQ ISRR++G+VRS+SK PTYRRR R V+K L+TY EK
Sbjct: 492 QRMEAWDNHSNPPQENLRTAQIQGISRRMMGMVRSVSKLPTYRRRFRQVVKALITYYSEK 551
Query: 561 EGSFRSSA 568
+G R+ +
Sbjct: 552 QGLNRTGS 559
>AT4G12680.1 | chr4:7475104-7478174 FORWARD LENGTH=576
Length = 575
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/526 (42%), Positives = 321/526 (61%), Gaps = 8/526 (1%)
Query: 39 GGIKAAVVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTERINAGLKLAVLIALPVX 98
G KA ++GP+++A++++GN VI+ L+PAH WT Y L +T+RI LK L+ P+
Sbjct: 28 GVTKALIIGPISSAIILVGNSCVIIGLWPAHFIWTYYCLARTKRIGLVLKTLALVLFPLP 87
Query: 99 XXXXXXXXXXXSALVALGYGFFTPWIATFEAFRQESESKKFVHGVVDGTWGTIKGSCTVV 158
S + YGFFTP +ATFEA ES + K H VDG++ TIKGSCTVV
Sbjct: 88 LLLWPVAGIVGSLFGGIAYGFFTPLMATFEAV-GESVTSKCYHCFVDGSFSTIKGSCTVV 146
Query: 159 RDFADLCFHSYPVYLKELRES-SQNCEPHSIRVLDVPSCIAVGLLGLIVDIPLYTVIALI 217
DF D CFHSY Y+ ELRE S + EP I++ +PSC+ L+G++VD+ L T +A+
Sbjct: 147 TDFTDFCFHSYFSYMDELREMVSADVEPLEIKLSRLPSCLLASLIGVMVDVLLITAVAVY 206
Query: 218 KSPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVVGSVLLAIVSSIFVGL 277
KSPYML KGW+RLL DL+ REGPFLE+VCVP AGLAIL WPL V G+V+ +++SS F+GL
Sbjct: 207 KSPYMLLKGWKRLLEDLVGREGPFLESVCVPFAGLAILLWPLAVAGAVIASVLSSFFLGL 266
Query: 278 YGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLXXXXXXXXXXXXXTEFSV 337
Y V+V+QE SF+ G++Y++A V+ FDEY ND LYLREGT L + +
Sbjct: 267 YSGVIVHQEDSFRMGLNYIIAAVSLFDEYVNDLLYLREGTSLPRPCYRTKTETVHGKRIL 326
Query: 338 RTNASVKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIWENMMKNCELRGRDLLN 397
+ +V + SS+ ++ +R++++AI K VQ+WE + K+CE+ GR LL
Sbjct: 327 GESKNVDLKSKRSSSLGSKLVSEQ---SRTLKKAITLYKPVQVWEWLFKSCEVNGRILLR 383
Query: 398 LNVITTVDLTEWLRTKESGHEAIGLGVPSYSLLCMILHSIKAXXXXXXXXXXXXXXQYNR 457
+I D+ E L S I L P++++L +L S K+ + N
Sbjct: 384 DGLIDVKDVEECLVKGNSKKLYIKL--PAWTVLQCLLASAKSNSSGLVITDGVELTELNS 441
Query: 458 PQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNSERANGWDNGAEIPQDPV 517
P+D++ W + P+L++K+QI+ LK+TE+E L KL + N ER WDN D V
Sbjct: 442 PRDKVFVWLVGPLLIMKEQIKNLKLTEDEEFCLRKLVMVCKN-ERTEDWDNTGFPSSDTV 500
Query: 518 RAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEKEGS 563
R Q+QAI RRL G+V SMS+ PT+RRR +++K+L ++E S
Sbjct: 501 RKAQLQAIIRRLQGMVASMSRIPTFRRRFMNLVKVLYIEALEMGAS 546
>AT5G40640.1 | chr5:16277345-16280258 FORWARD LENGTH=587
Length = 586
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 305/548 (55%), Gaps = 26/548 (4%)
Query: 32 FCAAFFLGGIKAAVVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTERINAGLKLAV 91
F LG IK V+ P+ + +GN +IL L P H WT+YS+ +++ LK+ +
Sbjct: 21 FTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAIWTLYSIASAKQLGPILKIFL 80
Query: 92 LIALPVXXXXXXXXXXXXSALVALGYGFFTPWIATFEAFRQESESKKFVHGVVDGTWGTI 151
+ +P+ S L YGF +P ATF+A E +S F H DGTW T+
Sbjct: 81 CLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAV-GEGKSNPFFHCFYDGTWSTV 139
Query: 152 KGSCTVVRDFADLCFHSYPVYLKELRESSQNCEPHSIRVLDVPSCIAVGLLGLIVDIPLY 211
+GS TVV DF D+CFHSY ++ +LR S+ N + IR+L +P + V +LG++VD P+
Sbjct: 140 QGSFTVVCDFKDVCFHSYFSFMDDLRTSTANRHYYEIRLLQIPGAVIVAVLGILVDFPVI 199
Query: 212 TVIALIKSPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVVGSVLLAIVS 271
+++AL KSPYMLFKGW RL HDLI REGPFLET+CVPIAGL IL WPL VVG+VL ++VS
Sbjct: 200 SLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAGLVILLWPLAVVGAVLGSVVS 259
Query: 272 SIFVGLYGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLXXXXXXXXXXXX 331
S+F+G YG VV YQE SF G+ YVVA V+ +DEY+ND L + EG+
Sbjct: 260 SVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVLDMPEGSCFPRPIYRRNEEGA 319
Query: 332 XTEFS---VRTNASVKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIWENMMKNC 388
T FS R N+ + SN+ P + ++K + + E + C
Sbjct: 320 STAFSGGLSRPNSFKTTPSRGGSNKGPMI----------------DLKPLDLLEALFVEC 363
Query: 389 ELRGRDLLNLNVITTVDLTEWLRTKESGHEAIGLGVPSYSLLCMILHSIKAXXX-XXXXX 447
G ++ +I + D+ E +K G + I G+P+YSLL +L SIK+
Sbjct: 364 RRHGEIMVTKGIINSKDIEEAKSSK--GSQVISFGLPAYSLLHELLRSIKSNSTGLLLGD 421
Query: 448 XXXXXXQYNRPQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNSERANGWD 507
NRP+D DWFL+P L+LKDQI+A ++EEE +L KL L G+SER
Sbjct: 422 GVTEITTRNRPKDAFFDWFLNPFLILKDQIEAANLSEEEEEYLGKLVLLFGDSERLKSSI 481
Query: 508 NGAEIPQ-DPVRAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEKEGSFRS 566
+E P +R ++ A +RRL G+ +S+S++PT+RR ++K L K F
Sbjct: 482 VESESPPLTELRKAELDAFARRLQGLTKSVSRYPTFRRHFVELVKKLSNDLDNKHNRFE- 540
Query: 567 SASNRSVP 574
+RSVP
Sbjct: 541 -GGSRSVP 547
>AT3G27390.1 | chr3:10133372-10136111 REVERSE LENGTH=589
Length = 588
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 307/552 (55%), Gaps = 37/552 (6%)
Query: 32 FCAAFFLGGIKAAVVGPVAAALMVLGNVGVILLLFPAHVWWTIYSLIKTERINAGLKLAV 91
F FLG IK V+ P+ ++ +GN VIL L P H+ WT YS++ +++ LK+ +
Sbjct: 21 FIGLLFLGFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIVWTFYSIVSAKQVGPILKIFL 80
Query: 92 LIALPVXXXXXXXXXXXXSALVALGYGFFTPWIATFEAFRQESESKKFVHGVVDGTWGTI 151
+ LP S L YGFF+P ATF+A E + +F H DGTW T+
Sbjct: 81 CLCLPAAIILWPIVGILGSVLGGALYGFFSPIFATFDAV-GEGKPYQFFHCFYDGTWSTM 139
Query: 152 KGSCTVVRDFADLCFHSYPVYLKELRESSQNCEPHSIRVLDVPSCIAVGLLGLIVDIPLY 211
+ S TVVRDF D+CFHSY + EL++S + + + IR+L +P + V +LG++VD P+
Sbjct: 140 QRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVLGILVDPPVI 199
Query: 212 TVIALIKSPYMLFKGWQRLLHDLISREGPFLETVCVPIAGLAILFWPLVVVGSVLLAIVS 271
+++A+ KSPYMLFKGW RL HDLI REGPFLET+CVPIAGLAIL WPL V G+V+ +++S
Sbjct: 200 SLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAGLAILLWPLAVTGAVIGSVIS 259
Query: 272 SIFVGLYGAVVVYQEKSFQRGVSYVVAMVAEFDEYTNDWLYLREGTVLXXXXXXXXXXXX 331
SIF+G Y VV YQE SF G+ Y+VA V+ +DEY+ D L L EG+
Sbjct: 260 SIFLGAYAGVVSYQESSFYYGLCYIVASVSIYDEYSTDILDLPEGSCF-PRPKYRRKDEE 318
Query: 332 XTEF--------SVRTNASVKGGDQPSSNEAPAMLVPTLAPARSVREAIQEVKMVQIWEN 383
T F SV+ +S++GG SVR + ++K + +
Sbjct: 319 PTPFSGPVPRLGSVKNASSMRGG--------------------SVRVPMIDIKPLDLLNE 358
Query: 384 MMKNCELRGRDLLNLNVITTVDLTEWLRTKESGHEAIGLGVPSYSLLCMILHSIKAXXX- 442
+ C G L +I + D+ E +K G + I +G+P+Y LL IL S+KA
Sbjct: 359 LFVECRRYGEVLATKGLINSKDIEEARSSK--GSQVISVGLPAYGLLYEILRSVKANSSG 416
Query: 443 XXXXXXXXXXXQYNRPQDRLIDWFLHPVLVLKDQIQALKMTEEEVRFLEKLTLFIGNSER 502
NRP+D DWFL+P L+LK+Q++A ++EEE +L +L L G+ ER
Sbjct: 417 LLLSDGVTEITTMNRPKDVFFDWFLNPFLILKEQMKATNLSEEEEEYLGRLVLLFGDPER 476
Query: 503 ANGWDN-GAEIPQDPVRAGQIQAISRRLVGIVRSMSKFPTYRRRHRHVMKLLVTYSVEKE 561
+ A P + ++ A +RR+ G+ +++S++PT+R RH + L+ S + +
Sbjct: 477 LKSSNAISASPPLTERKRAELDAFARRMQGLTKTVSRYPTFR---RHFVALVKKLSEDLD 533
Query: 562 GSFRSSASNRSV 573
+SA + S+
Sbjct: 534 LKDNNSAKDESI 545
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,949,349
Number of extensions: 411237
Number of successful extensions: 923
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 909
Number of HSP's successfully gapped: 4
Length of query: 583
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 479
Effective length of database: 8,255,305
Effective search space: 3954291095
Effective search space used: 3954291095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)