BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0447800 Os04g0447800|AB056061
(500 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02010.1 | chr2:474375-476495 REVERSE LENGTH=494 730 0.0
AT1G65960.2 | chr1:24552094-24557253 FORWARD LENGTH=495 728 0.0
AT5G17330.1 | chr5:5711141-5714839 FORWARD LENGTH=503 726 0.0
AT3G17760.1 | chr3:6078893-6080838 REVERSE LENGTH=495 711 0.0
AT2G02000.1 | chr2:469505-471997 REVERSE LENGTH=501 707 0.0
AT3G17720.1 | chr3:6062446-6063483 FORWARD LENGTH=195 246 1e-65
AT1G27980.1 | chr1:9748812-9752618 FORWARD LENGTH=545 91 1e-18
>AT2G02010.1 | chr2:474375-476495 REVERSE LENGTH=494
Length = 493
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/431 (78%), Positives = 383/431 (88%), Gaps = 1/431 (0%)
Query: 22 SRYVQDPVPRYELGERSISKDAAYQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEA 81
SRYV++ +PR+E+ E SI K+AAYQI++DEL+LD +PRLNLASFVTTWMEPECD+L++E+
Sbjct: 20 SRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMES 79
Query: 82 INKNYADMDEYPVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
INKNY DMDEYPVTTELQNRCVN+IARLFNAP+GDGE AVGVGTVGSSEAIMLAGLAFKR
Sbjct: 80 INKNYVDMDEYPVTTELQNRCVNMIARLFNAPLGDGEAAVGVGTVGSSEAIMLAGLAFKR 139
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+WQN+RKA G P+DKPNIVTGANVQVCWEKFARYFEVELKEV L E YVMDPVKAV+MV
Sbjct: 140 QWQNKRKAQGLPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLREDYYVMDPVKAVEMV 199
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPEL 261
DENTICVAAILGSTLTGEFEDV+ LNDLL KNK+TGWDTPIHVDAASGGFIAPF+YPEL
Sbjct: 200 DENTICVAAILGSTLTGEFEDVKLLNDLLVEKNKQTGWDTPIHVDAASGGFIAPFLYPEL 259
Query: 262 EWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 321
EWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR K DLP+ELIFHINYLGADQPTFTLNFS
Sbjct: 260 EWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFS 319
Query: 322 KGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFT 381
KGSSQ+IAQYYQ +RLGFEGY++VM NC E+ LR+GLEKTGRF I+SKE GVPLVAF+
Sbjct: 320 KGSSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFKIVSKENGVPLVAFS 379
Query: 382 FKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRM 441
KD + F ++ LRR+GWIVPAYTMPA +H+TVLRVV+REDF R LAER ++
Sbjct: 380 LKDSSRHNEFEVAHTLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVADFEK 439
Query: 442 ALDEMD-LAAR 451
L E+D L AR
Sbjct: 440 VLHELDTLPAR 450
>AT1G65960.2 | chr1:24552094-24557253 FORWARD LENGTH=495
Length = 494
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/426 (78%), Positives = 380/426 (89%)
Query: 22 SRYVQDPVPRYELGERSISKDAAYQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEA 81
SRYV+ +P+YE+GE SI KDAAYQI+ DEL+LD +PRLNLASFVTTWMEPECD+LI+++
Sbjct: 19 SRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDS 78
Query: 82 INKNYADMDEYPVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
INKNY DMDEYPVTTELQNRCVNIIARLFNAP+ + E AVGVGTVGSSEAIMLAGLAFKR
Sbjct: 79 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTVGSSEAIMLAGLAFKR 138
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+WQN+RKA GKP+DKPNIVTGANVQVCWEKFARYFEVELKEV L+EG YVMDP KA +MV
Sbjct: 139 KWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVNLSEGYYVMDPDKAAEMV 198
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPEL 261
DENTICVAAILGSTL GEFEDV+RLNDLL KN+ TGW+TPIHVDAASGGFIAPFIYPEL
Sbjct: 199 DENTICVAAILGSTLNGEFEDVKRLNDLLVKKNEETGWNTPIHVDAASGGFIAPFIYPEL 258
Query: 262 EWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 321
EWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR EDLPEELIFHINYLGADQPTFTLNFS
Sbjct: 259 EWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRAAEDLPEELIFHINYLGADQPTFTLNFS 318
Query: 322 KGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFT 381
KGSSQIIAQYYQ +RLGFEGYK+VM+NC+E+ L+EG+EKT RF I+SK++GVP+VAF+
Sbjct: 319 KGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFS 378
Query: 382 FKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRM 441
KD + F +S LRR+GWIVPAYTMPA +H+TVLRVV+REDF R LAER ++ +
Sbjct: 379 LKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISK 438
Query: 442 ALDEMD 447
L E+D
Sbjct: 439 VLHELD 444
>AT5G17330.1 | chr5:5711141-5714839 FORWARD LENGTH=503
Length = 502
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/488 (71%), Positives = 399/488 (81%), Gaps = 14/488 (2%)
Query: 22 SRYVQDPVPRYELGERSISKDAAYQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEA 81
SRYV+ +PR+++ E SI K+AAYQI++DEL+LD +PRLNLASFVTTWMEPECD+LI+ +
Sbjct: 20 SRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSS 79
Query: 82 INKNYADMDEYPVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
INKNY DMDEYPVTTELQNRCVN+IA LFNAP+ + E AVGVGTVGSSEAIMLAGLAFKR
Sbjct: 80 INKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKR 139
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+WQN+RKA GKP DKPNIVTGANVQVCWEKFARYFEVELKEVKL+EG YVMDP +AVDMV
Sbjct: 140 KWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMV 199
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPEL 261
DENTICVAAILGSTL GEFEDV+ LNDLL KNK TGWDTPIHVDAASGGFIAPF+YPEL
Sbjct: 200 DENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPEL 259
Query: 262 EWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 321
EWDFRLPLVKSINVSGHKYGLVYAG+GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS
Sbjct: 260 EWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 319
Query: 322 KGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFT 381
KGSSQ+IAQYYQ +RLG EGY++VM+NC E+ LREGLEKT RF I+SK+EGVPLVAF+
Sbjct: 320 KGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFS 379
Query: 382 FKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRM 441
KD + F +S LRRYGWIVPAYTMP +H+TVLRVV+REDF R LAER + +
Sbjct: 380 LKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK 439
Query: 442 ALDEMDLAARAPVPRVQLTIELGPARTAGEEASIRVVKSEAVPVRKSVPLVAG------- 494
+ E+D P RV I LG ++ ++ V ++ + K ++ G
Sbjct: 440 VMRELD---ELP-SRVIHKISLGQEKSESNSDNLMVTVKKS-DIDKQRDIITGWKKFVAD 494
Query: 495 --KTKGVC 500
KT G+C
Sbjct: 495 RKKTSGIC 502
>AT3G17760.1 | chr3:6078893-6080838 REVERSE LENGTH=495
Length = 494
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/426 (75%), Positives = 380/426 (89%)
Query: 22 SRYVQDPVPRYELGERSISKDAAYQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEA 81
SRYV+ VPR+++ + + KDAAYQ+++DEL+LD +PRLNLASFVTTWMEPECD+LI+++
Sbjct: 19 SRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLIMDS 78
Query: 82 INKNYADMDEYPVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
+NKNY DMDEYPVTTELQNRCVN+IA LF+APVG+ E A+G GTVGSSEAIMLAGLAFKR
Sbjct: 79 VNKNYVDMDEYPVTTELQNRCVNMIANLFHAPVGEDEAAIGCGTVGSSEAIMLAGLAFKR 138
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+WQ+RRKA G P DKPNIVTGANVQVCWEKFARYFEVELKEVKL+E YVMDP KAV+MV
Sbjct: 139 KWQHRRKAQGLPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEDYYVMDPAKAVEMV 198
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPEL 261
DENTICVAAILGSTLTGEFEDV++LNDLLA KN TGW+TPIHVDAASGGFIAPF+YP+L
Sbjct: 199 DENTICVAAILGSTLTGEFEDVKQLNDLLAEKNAETGWETPIHVDAASGGFIAPFLYPDL 258
Query: 262 EWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 321
EWDFRLP VKSINVSGHKYGLVYAGVGWV+WR K+DLPEEL+FHINYLGADQPTFTLNFS
Sbjct: 259 EWDFRLPWVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEELVFHINYLGADQPTFTLNFS 318
Query: 322 KGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFT 381
KGSSQIIAQYYQF+RLGFEGYK++M+NCM++AR LREG+E TG+F I+SK+ GVPLVAF+
Sbjct: 319 KGSSQIIAQYYQFIRLGFEGYKNIMENCMDNARRLREGIEMTGKFNIVSKDIGVPLVAFS 378
Query: 382 FKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRM 441
KD + F ++ LR++GWI+PAYTMPA +H+ VLRVV+REDF R LA+R ++H+
Sbjct: 379 LKDSSKHTVFEIAESLRKFGWIIPAYTMPADAQHIAVLRVVIREDFSRGLADRLITHIIQ 438
Query: 442 ALDEMD 447
L E++
Sbjct: 439 VLKEIE 444
>AT2G02000.1 | chr2:469505-471997 REVERSE LENGTH=501
Length = 500
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/431 (75%), Positives = 378/431 (87%), Gaps = 1/431 (0%)
Query: 22 SRYVQDPVPRYELGERSISKDAAYQIVHDELLLDSSPRLNLASFVTTWMEPECDRLILEA 81
SRYV++ + R+E+ + SI K+AAYQI++DEL D +PRLNLASFVTTWMEPECD+L++E+
Sbjct: 20 SRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNLASFVTTWMEPECDKLMMES 79
Query: 82 INKNYADMDEYPVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
INKN +MD+YPVTT+LQNRCVN+IARLFNAP+GDGE A+GVGTVGSSEA+MLAGLAFKR
Sbjct: 80 INKNNVEMDQYPVTTDLQNRCVNMIARLFNAPLGDGEAAIGVGTVGSSEAVMLAGLAFKR 139
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+WQN+RKA G P+D+PNIVTGAN+QVC EKFARYFEVELKEVKL EG YVMDP KAV+MV
Sbjct: 140 QWQNKRKALGLPYDRPNIVTGANIQVCLEKFARYFEVELKEVKLREGYYVMDPDKAVEMV 199
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFIYPEL 261
DENTICV AILGSTLTGEFEDV+ LNDLL KNK+TGWDTPIHVDAASGGFIAPF+YP+L
Sbjct: 200 DENTICVVAILGSTLTGEFEDVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDL 259
Query: 262 EWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFS 321
EWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR K DLP+ELIFHINYLGADQPTFTLNFS
Sbjct: 260 EWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFS 319
Query: 322 KGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPLVAFT 381
KGSSQ+IAQYYQ +RLGFEGY++VM NC E+ LR+GLEKTGRF I+SKE GVPLVAF+
Sbjct: 320 KGSSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPLVAFS 379
Query: 382 FKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALEHMTVLRVVVREDFGRPLAERFLSHVRM 441
KD + F ++ LRR+GWIVPAYTMPA +H+TVLRVV+REDF R LAER ++
Sbjct: 380 LKDSSRHNEFEVAEMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVADFEK 439
Query: 442 ALDEMD-LAAR 451
L E+D L AR
Sbjct: 440 VLHELDTLPAR 450
>AT3G17720.1 | chr3:6062446-6063483 FORWARD LENGTH=195
Length = 194
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/162 (74%), Positives = 132/162 (81%), Gaps = 3/162 (1%)
Query: 93 PVTTELQNRCVNIIARLFNAPVGDGEKAVGVGTVGSSEAIMLAGLAFKRRWQNRRKAAGK 152
P T L NRCVN+IA LF+APVG E + G V SSE+ AGLAFK +WQ+RRKA G
Sbjct: 27 PTPTSLDNRCVNMIANLFHAPVGQDEAVISCGIVASSES---AGLAFKMKWQHRRKAQGL 83
Query: 153 PHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMVDENTICVAAIL 212
P DKPNIVTG NVQVCWEKFARYFEVELKEVKL+E YVMDP KAV+MVDEN+ICVAAIL
Sbjct: 84 PIDKPNIVTGVNVQVCWEKFARYFEVELKEVKLSEDYYVMDPAKAVEMVDENSICVAAIL 143
Query: 213 GSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIA 254
GST TGEFE V+ LNDLLA KN +T W+TPIHVDAASGGFIA
Sbjct: 144 GSTFTGEFEYVKLLNDLLAEKNAKTAWETPIHVDAASGGFIA 185
>AT1G27980.1 | chr1:9748812-9752618 FORWARD LENGTH=545
Length = 544
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 154/357 (43%), Gaps = 22/357 (6%)
Query: 83 NKNYADMDEYPVTTELQNRCVNIIARLFNAP-VGDGEKAVGVGTVGSSEAIMLAGLAFKR 141
+ N +D + ++ V + A L + G + G T G +E+I+LA + R
Sbjct: 160 HTNPLHIDVFQSVVRFESEVVAMTAALLGSKETASGGQICGNMTSGGTESIVLA-VKSSR 218
Query: 142 RWQNRRKAAGKPHDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVDMV 201
+ +K +P ++ + ++K A+YF+++L V + + + D +
Sbjct: 219 DYMKYKKGI----TRPEMIIPESGHSAYDKAAQYFKIKLWRVPVDKD-FRADVKATRRHI 273
Query: 202 DENTICVAAILGSTLTGEFEDVRRLNDLLAAKNKRTGWDTPIHVDAASGGFIAPFI---- 257
+ NTI + G + + L L + + HVD GGF+ PF
Sbjct: 274 NRNTIMIVGSAPGFPHGIIDPIEELGQLALS------YGICFHVDLCLGGFVLPFARKLG 327
Query: 258 YPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRNKEDLPEELIFHINYLGADQPTFT 317
Y +DF + V SI+V HKYGL G V++RN E + + + G + T
Sbjct: 328 YQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTVLYRNHEIRKHQFVAVTEWSGGLYVSPT 387
Query: 318 LNFSKGSSQIIAQYYQFLRLGFEGYKSVMKNCMESARTLREGLEKTGRFTIISKEEGVPL 377
+ S+ S + + + LG EGY ME+++ L EG+ + +I K + + +
Sbjct: 388 IAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIMEASKRLEEGVREIHELFVIGKPD-MTI 446
Query: 378 VAFTFKDGAGAQAFRLSSGLRRYGWIVPAYTMPAALE-HMTVLRVVVREDFGRPLAE 433
VAF K F ++ + GW + A P ++ +T+ V V +DF R L E
Sbjct: 447 VAFGSK---ALDIFEVNDIMSSKGWHLNALQRPNSIHICITLQHVPVVDDFLRDLRE 500
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,244,876
Number of extensions: 436082
Number of successful extensions: 948
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 946
Number of HSP's successfully gapped: 7
Length of query: 500
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 397
Effective length of database: 8,282,721
Effective search space: 3288240237
Effective search space used: 3288240237
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)