BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0433100 Os04g0433100|Os04g0433100
(371 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407 227 8e-60
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 203 1e-52
AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443 202 2e-52
AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466 176 2e-44
AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411 171 5e-43
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 171 7e-43
AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327 60 3e-09
AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330 59 4e-09
AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711 55 4e-08
AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738 55 4e-08
AT2G04740.1 | chr2:1657137-1659563 FORWARD LENGTH=579 54 2e-07
>AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407
Length = 406
Score = 227 bits (578), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 213/363 (58%), Gaps = 36/363 (9%)
Query: 23 TESGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNVSDCISIYL 81
T +G H +I+GYS +K + IG V S F VGG+ W I +YP+G + + S +S+++
Sbjct: 30 TINGSHEFKISGYSLVK-GMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFI 88
Query: 82 VLDGHEAHDYYYGRSIVRAELTLSLLDQ---EREPVTSYIYSHGLQIFDGYGRYRGSL-- 136
L A VRA L+L+DQ ER V S+ + L+ +YRGS+
Sbjct: 89 ALASEGAD--------VRALFELTLVDQSGNERHKVHSH-FGRTLESGPYTLKYRGSMWG 139
Query: 137 --RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGR--RVTLPPSDLARHLGGLL 192
RF ++++LE S+YL+DN +RC + V+K ++ G R + +P S L + G LL
Sbjct: 140 YKRFFKRSLLESSDYLKDNGLLVRCCVGVVK---SRTEGPRCYNIPVPVSGLGQQFGKLL 196
Query: 193 ATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVIIRVDDMEA 252
+G GADVTFEVDG+TF AH+ VLAARS VF +LF N I ++D++A
Sbjct: 197 ESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNC------IIIEDVQA 250
Query: 253 QDFEALLHFIYTDSLPEMK---GGD----AVAMLPDLVAAANRYKMERLRLVCEDKLCEY 305
F+ LLHFIY D +P+M+ G D + + L+AAA+RY +ERLR +CE KLCE
Sbjct: 251 PIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRTICESKLCEG 310
Query: 306 VTVRTVAAMLAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGLEHLTKSYPFVLKDLIA 365
+++ TVA LA A +H C +L+ CL+ + P NL+ ++ET+G ++L +S P +L +L+
Sbjct: 311 ISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETDGFDYLKESCPSLLSELLE 370
Query: 366 MFA 368
A
Sbjct: 371 YVA 373
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 207/363 (57%), Gaps = 36/363 (9%)
Query: 23 TESGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNVSDCISIYL 81
T +G H I GYS K +S G +QS F VGG+DW I +YP+G N + S IS+++
Sbjct: 22 TVNGSHQFTIQGYSLAK-GMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFI 80
Query: 82 VLDGHEAHDYYYGRSIVRAELTLSLLDQEREPVTSYIYSHGLQIFDG---YGRYRGSL-- 136
L +++D +RA L+L+DQ + ++SH + +G +Y+GS+
Sbjct: 81 AL-ASDSND-------IRALFELTLMDQSGKG-KHKVHSHFDRALEGGPYTLKYKGSMWG 131
Query: 137 --RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGRR--VTLPPSDLARHLGGLL 192
RF +++ LE S+YL+D+ I C + V++ A+ G ++ + LP S++ + L LL
Sbjct: 132 YKRFFKRSALETSDYLKDDCLVINCTVGVVR---ARLEGPKQYGIVLPLSNMGQGLKDLL 188
Query: 193 ATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVIIRVDDMEA 252
+ VG D+ F+V +T+ AH+ +LAARSPVF + F N I +DD+E
Sbjct: 189 DSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDR------IVIDDIEP 242
Query: 253 QDFEALLHFIYTDSLP---EMKGGDAVA----MLPDLVAAANRYKMERLRLVCEDKLCEY 305
F+A+L FIYTD LP E+ G + + M+ L+AAA+ Y + RL+++CE LCE
Sbjct: 243 SIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEVLLCEK 302
Query: 306 VTVRTVAAMLAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGLEHLTKSYPFVLKDLIA 365
+ V VA LA A +HQ +L+ CL+ + PANL ++++EG +HL +S P +L +L+
Sbjct: 303 LDVDNVATTLALAEQHQFLQLKAFCLEFVASPANLGAVMKSEGFKHLKQSCPTLLSELLN 362
Query: 366 MFA 368
A
Sbjct: 363 TVA 365
>AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443
Length = 442
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 207/397 (52%), Gaps = 73/397 (18%)
Query: 25 SGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNVSDCISIYLVL 83
+G H +I GYS K V +G V S F VGG+ W I +YP+G + + S +S+++ L
Sbjct: 33 NGFHEFKICGYSLAK-GVGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIAL 91
Query: 84 DGHEAHDYYYGRSIVRAELTLSLLDQEREPVTSYIYSHGLQIFDG---YGRYRGSL---- 136
A VRA L+L+DQ ++SH + D +YRGS+
Sbjct: 92 ASEGAD--------VRALFELTLVDQSGNG-KHKVHSHFGRALDSGPYTLKYRGSMWGYK 142
Query: 137 RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGRR---VTLPPSDLARHLGGLLA 193
RF +++ LE S+YL++N +RC + V+K+ T G R + +P S+L + LG LL
Sbjct: 143 RFFRRSSLESSDYLKENSLLVRCRVGVVKSV----TEGPRYYNIPVPVSNLGQQLGNLLE 198
Query: 194 TGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVIIRVDDMEAQ 253
+G G DV F+VDG+TF AH+ VLA RSPVF+ +LF N I ++DMEA
Sbjct: 199 SGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPLGDRNTKC------ITIEDMEAP 252
Query: 254 DF-----------------------------------EALLHFIYTDSLPEMK---GGD- 274
F + LLHFIY D LP+M+ G D
Sbjct: 253 IFKVLPLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDELPDMQELIGTDS 312
Query: 275 ---AVAMLPDLVAAANRYKMERLRLVCEDKLCEYVTVRTVAAMLAFAGEHQCPELEKKCL 331
+ + L+AAA+RY +ERL+ +CE KLCE V + TVA LA A +H C +L+ CL
Sbjct: 313 TLASTLVAQHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCL 372
Query: 332 QLLEDPANLRNIVETEGLEHLTKSYPFVLKDLIAMFA 368
+ + P NL+ +++T+G ++L +S P +L +L+ A
Sbjct: 373 KFVALPENLKAVMQTDGFDYLKESCPSLLTELLQYVA 409
>AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466
Length = 465
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 194/377 (51%), Gaps = 47/377 (12%)
Query: 15 SASAIVGGTESGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNV 73
+ S V T +G H I GYS K + IG + S F VGG+ W I +YP+G N +
Sbjct: 36 TTSLSVTQTINGSHSFTIKGYSLAK-GIGIGKHIASDTFTVGGYQWAIYFYPDGKNPEDN 94
Query: 74 SDCISIYLVL--DGHEAHDYYYGRSIVRAELTLSLLDQE---REPVTSYIYSHGLQIFDG 128
S +S+++ L DG + VRA LSLLDQ + V S+ + L+
Sbjct: 95 SAYVSVFIALASDGTD----------VRALFELSLLDQSGKGKHKVHSH-FDRALESGPY 143
Query: 129 YGRYRGSL----RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGRRVTLPPSDL 184
+YRGS+ RF ++ +LE S++L+D+ I C + V+ + E + +P SD+
Sbjct: 144 TLKYRGSMWGYKRFFRRLMLETSDFLKDDCLKINCTVGVVVS-EIDCPRLHSIHVPASDI 202
Query: 185 ARHLGGLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVI 244
H G LL G+D+TF V G+ F AHR VLAARSPVF E + TG
Sbjct: 203 GSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDV-------TGEEDRD 255
Query: 245 IRVDDMEAQDFEALLHFIYTDSLPE-------------MKGGDAVAMLPDLVAAANRYKM 291
I V DME + F+ALLH+IY D+L E D +A L+ AA++YK+
Sbjct: 256 IEVTDMEPKVFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLA--AKLLGAADKYKL 313
Query: 292 ERLRLVCEDKLCEYVTVRTVAAMLAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGLEH 351
RL L+CE LC+ ++V +VA +LA A + L+ CL+ + NL ++ ++G ++
Sbjct: 314 PRLSLMCESVLCKDISVDSVANILALADRYNASALKSVCLKFAAE--NLIAVMRSDGFDY 371
Query: 352 LTKSYPFVLKDLIAMFA 368
L + P + +L+ A
Sbjct: 372 LREHCPSLQSELLKTVA 388
>AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411
Length = 410
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 198/361 (54%), Gaps = 45/361 (12%)
Query: 15 SASAIVGGTESGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNV 73
++S V T +G H I GYS K + IG + S +F VGG+ W I +YP+G N +
Sbjct: 18 TSSKSVTQTVNGSHQFVIQGYSLAK-GMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDN 76
Query: 74 SDCISIYLVL--DGHEAHDYYYGRSIVRAELTLSLLDQEREPVTSYIYSHGLQIFDG--- 128
S +S+++ L +G E VRA L+L+DQ + ++SH + DG
Sbjct: 77 SSYVSVFIALASEGTE----------VRALFELALVDQSGKG-KHKVHSHFERSLDGGPY 125
Query: 129 YGRYRGSL----RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGRRVTLPPSDL 184
+YRGS+ RF ++++LE S+YL+D+ I C + V+ + E V +P S+L
Sbjct: 126 TLKYRGSMWGYKRFFRRSILETSDYLKDDCLIINCTVGVVVS-EILCPQLHSVHVPDSEL 184
Query: 185 ARHLGGLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVI 244
H G LL + G+D+TF + G+ FLAH+ VLAARSP F + FS E N
Sbjct: 185 GSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTE------- 237
Query: 245 IRVDDMEAQDFEALLHFIYTDSLPE------------MKGGDAV-AMLPDLVAAANRYKM 291
+ ++D+E + F+ALL F+Y DSLPE +K + ++ ++AAA++Y +
Sbjct: 238 VTINDLEPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDL 297
Query: 292 ERLRLVCEDKLCEYVTVRTVAAMLAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGLEH 351
RLRL+CE +C+ V+V++VA +LA A + EL+ CL+ + NL ++ET+ +
Sbjct: 298 IRLRLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKFTAE--NLAAVLETDAYQQ 355
Query: 352 L 352
+
Sbjct: 356 M 356
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 195/379 (51%), Gaps = 49/379 (12%)
Query: 15 SASAIVGGTESGQHLLEINGYSSIKDAVSIGNCVQSRHFRVGGHDWYIRYYPNGFN-SNV 73
++S V T +G H I GYS K + +G + S +F VGG+ W I YP+G N +
Sbjct: 25 TSSRSVTQTTNGSHQFVIQGYSLAK-GIGVGKHIASDNFSVGGYQWTIFVYPDGKNPEDN 83
Query: 74 SDCISIYLVLDGHEAHDYYYGRSIVRAELTLSLLDQEREPVTSYIYSHGLQIFDG---YG 130
S +S+++VL VRA LSL+DQ + ++SH + DG
Sbjct: 84 SSYVSVFIVLASECTE--------VRALFELSLVDQSGKG-KHKVHSHFNRSLDGGPYTL 134
Query: 131 RYRGSL----RFIQKAVLERSEYLRDNRFTIRCDITVMKNPEAKDTGGRRVTLPPSDLAR 186
+YRGS+ RF ++++LE S+YL+D+ I C + V+ + E + +P S+L
Sbjct: 135 KYRGSMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVVVS-EMHCPRLLSIHVPDSELGS 193
Query: 187 HLGGLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVIIR 246
H G LL T G+DVTF+V G+ F AH+ VLAARS F ++ + N+ +
Sbjct: 194 HFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSD-------VV 246
Query: 247 VDDMEAQDFEALLHFIYTDSLPEMKGGDAV-----------------AMLPDLVAAANRY 289
+ D+E + F+ALLHF+Y DSLP GD ++ L+AAA Y
Sbjct: 247 ISDLEPKVFKALLHFMYKDSLP----GDVEPLTAHSFDLLRPSEIDDTLIVKLLAAAEMY 302
Query: 290 KMERLRLVCEDKLCEYVTVRTVAAMLAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGL 349
+ RLRL+CE +C+ +++ +V+ +LA + ++ EL+ L+ + NL +++T+
Sbjct: 303 NLSRLRLLCESHICKGISISSVSKILALSDKYNASELKSVSLKFTAE--NLAAVLQTKAY 360
Query: 350 EHLTKSYPFVLKDLIAMFA 368
E L P + +L+ A
Sbjct: 361 EDLKDDCPNLQSELLKAVA 379
>AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327
Length = 326
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 26/204 (12%)
Query: 154 RFTIRCDITVMKNPEAKDTGGRRVTLPPSDLA----------RHLGGLLATGVGADVTFE 203
RFTI D+ + GG + P+D + L +L + DV
Sbjct: 109 RFTI--DVEFLDLKICPVNGGEASPVWPTDATMQSISTQTTLKCLSRMLEESILTDVIIH 166
Query: 204 VDGKTFLAHRNVLAARSPVFHQELF--SLTEKGNAATGGAGVIIRVDDMEAQDFEALLHF 261
T AH+ +L+A S VF + +F L EK ++ I +DDM + ALL +
Sbjct: 167 TADGTLSAHKAILSASSTVF-KSMFHHDLMEKESST-------IHIDDMSRESCMALLSY 218
Query: 262 IYTDSLPEMKGGDAVAMLPDLVAAANRYKMERLRLVCEDKLCEYVTVRTVAAMLAFAGEH 321
+Y + E +A+L AAN+Y + L+ CE+ L E + V L A +
Sbjct: 219 LYGNITQEEFWKHRLALL----GAANKYDITDLKAACEESLMEDINSSNVLERLQEAWLY 274
Query: 322 QCPELEKKCLQLLEDPANLRNIVE 345
Q +L+K CL L D + ++ E
Sbjct: 275 QLEKLKKGCLMYLFDFGKIYDVRE 298
>AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 188 LGGLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQE-LFSLTEKGNAATGGAGVIIR 246
LG +L + D+T + AHR VLAARSPVF L L EK + I
Sbjct: 154 LGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSE-------IN 206
Query: 247 VDDMEAQDFEALLHFIYTDSLPEMKGGDAVAMLPDLVAAANRYKMERLRLVCEDKLCEYV 306
V DM +A L +IY + ++ D + L+ AA +Y + L+ C L + +
Sbjct: 207 VLDMPLDACQAFLSYIYGN----IQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDI 262
Query: 307 TVRTVAAMLAFAGEHQCPELEKKCLQLL 334
+ V L A +Q PEL+ C++ L
Sbjct: 263 DTKNVLERLQNAYLYQLPELKASCMRYL 290
>AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711
Length = 710
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 13/157 (8%)
Query: 180 PPSDLAR-HLG-GLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAA 237
PPS R +LG + +DVTF V+G+TF AHR L A S F + +F + A
Sbjct: 521 PPSPTQRVYLGEQYVNNATLSDVTFLVEGRTFYAHRICLLASSDAF-RAMFDGGYREKDA 579
Query: 238 TGGAGVIIRVDDMEAQDFEALLHFIYTDSLPEMKGGDAVAMLPDLVAAANRYKMERLRLV 297
I + +++ + FE ++ FIYT S+ + DL+ AA++Y +E L+ +
Sbjct: 580 RD-----IEIPNIKWEVFELMMRFIYTGSVDITN-----EISKDLLRAADQYLLEGLKRL 629
Query: 298 CEDKLCEYVTVRTVAAMLAFAGEHQCPELEKKCLQLL 334
CE + + +T+ ++ M + L + C+ +
Sbjct: 630 CEYTIAQDITLESIGDMYELSEAFHAMSLRQACIMFI 666
>AT5G13060.1 | chr5:4142958-4146952 FORWARD LENGTH=738
Length = 737
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 198 ADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLTEKGNAATGGAGVIIRVDDMEAQDFEA 257
+DVTF +DGK F AH+ L A S +F L ++ NA + + ++ + FE
Sbjct: 568 SDVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQN------VEIPNIRWEVFEL 621
Query: 258 LLHFIYTDSLPEMKGGDAVAMLPDLVAAANRYKMERLRLVCEDKLCEYVTVRTVAAMLAF 317
++ FIY+ + A + DL+ AA++Y +E L+ CE + + + + + M
Sbjct: 622 MMKFIYSGRI-----NIAKHLAKDLLVAADQYLLEGLKRQCEYTIAQEICLDNIPEMYEL 676
Query: 318 AGEHQCPELEKKC 330
A L + C
Sbjct: 677 ADTFNASALRRAC 689
>AT2G04740.1 | chr2:1657137-1659563 FORWARD LENGTH=579
Length = 578
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 198 ADVTFEVDGKTFLAHRNVLAARSPVFHQELFSLT---EKGNAATGGAGVIIRVDDMEAQD 254
ADV VD + F H+ +LA+RS F L + E N G + D+ A+
Sbjct: 338 ADVCVRVDKRNFYCHQVILASRSEYFRARLSRVNDFHEGKNGLPGDTLPFLEEHDLSAEA 397
Query: 255 FEALLHFIYTDSLPEMKGGDAVAMLPDLVAAANRYKMERLRLVCEDKLCEYVTVRTVAAM 314
FE ++ ++YTD L E+ A ++ A+RY + L+ D L ++ T A +
Sbjct: 398 FEKMIEYMYTDGLKEINPNQA----EEIFDVASRYLLFPLKRAVADALLPHLETATPAEL 453
Query: 315 ---LAFAGEHQCPELEKKCLQLLEDPANLRNIVETEGLEHLTKSYP 357
L + + ++ + CL L+ N VET + + P
Sbjct: 454 CQWLVLSDMYGVLKIREYCLDLV--ACNFEAFVETHEFRAMLLTLP 497
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,159,513
Number of extensions: 345936
Number of successful extensions: 847
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 826
Number of HSP's successfully gapped: 13
Length of query: 371
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 271
Effective length of database: 8,364,969
Effective search space: 2266906599
Effective search space used: 2266906599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)