BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0432900 Os04g0432900|Os04g0432900
(368 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407 192 3e-49
AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409 176 2e-44
AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443 167 9e-42
AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466 161 5e-40
AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416 158 4e-39
AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411 148 6e-36
AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330 54 1e-07
AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711 54 2e-07
AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327 52 7e-07
>AT3G06190.1 | chr3:1874577-1876575 REVERSE LENGTH=407
Length = 406
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 205/380 (53%), Gaps = 33/380 (8%)
Query: 1 MPTATGSRTPVRSASAVIAGTESGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHL 60
+P ++ S + S T +G H KI GYS +K + G + S +F GG+SW +
Sbjct: 10 VPGSSKSTAQSLTESTSRTETINGSHEFKISGYSLVKG-MGIGKYVASDTFMVGGYSWAI 68
Query: 61 RYYPNGFN-SDCAECISIFLQLDYNVMKGVKAQYKFSLLDRA---RKPSYSR-----SSG 111
+YP+G + D + +S+F+ L + V+A ++ +L+D++ R +S SG
Sbjct: 69 YFYPDGKSPEDNSVYVSLFIALA-SEGADVRALFELTLVDQSGNERHKVHSHFGRTLESG 127
Query: 112 KADV-FLNTGWGYRTYIERGLLESSEYLRDDCLTIVCDFTVFKDLRTEDIDVDDAMXXXX 170
+ + + WGY+ + +R LLESS+YL+D+ L + C V K RTE +
Sbjct: 128 PYTLKYRGSMWGYKRFFKRSLLESSDYLKDNGLLVRCCVGVVKS-RTEGPRCYN------ 180
Query: 171 XXXXXXXXXSDLHRHLGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATT 230
S L + G LL +G+GADVTFEV+G+TF AH+ VLAARS VFR LFG
Sbjct: 181 ----IPVPVSGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLR 236
Query: 231 GGADDVVRVNIDAMKVQDFEALLHYMYTDSLPEMK-------GGEXXXXXXXXXXXXNRY 283
+++ + I+ ++ F+ LLH++Y D +P+M+ +RY
Sbjct: 237 --SENTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRY 294
Query: 284 KMERLRLVCEHKLCEYVNGRTVVAMLAFAGEHQCNGLKEKCLRFLDDPVKLRLIVQAEGV 343
+ERLR +CE KLCE ++ TV LA A +H C LK CL+F+ P L+ +++ +G
Sbjct: 295 ALERLRTICESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETDGF 354
Query: 344 ENLSKSYPSILKDVIAKFVA 363
+ L +S PS+L +++ ++VA
Sbjct: 355 DYLKESCPSLLSELL-EYVA 373
>AT2G39760.1 | chr2:16583213-16585983 FORWARD LENGTH=409
Length = 408
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 184/369 (49%), Gaps = 34/369 (9%)
Query: 13 SASAVIAGTESGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHLRYYPNGFN-SDC 71
S S T +G H I GYS K P G I+S F GG+ W + +YP+G N D
Sbjct: 14 SVSTSFIETVNGSHQFTIQGYSLAKGMSP-GKFIQSDIFSVGGYDWAIYFYPDGKNPEDQ 72
Query: 72 AECISIFLQLDYNVMKGVKAQYKFSLLDRARKPSYSRSSGKADVFLNTG----------W 121
+ IS+F+ L + ++A ++ +L+D++ K + S D L G W
Sbjct: 73 SSYISLFIALASD-SNDIRALFELTLMDQSGKGKHKVHS-HFDRALEGGPYTLKYKGSMW 130
Query: 122 GYRTYIERGLLESSEYLRDDCLTIVCDFTVFKDLRTEDIDVDDAMXXXXXXXXXXXXXSD 181
GY+ + +R LE+S+YL+DDCL I C V + A S+
Sbjct: 131 GYKRFFKRSALETSDYLKDDCLVINCTVGVVR-----------ARLEGPKQYGIVLPLSN 179
Query: 182 LHRHLGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVVRVNI 241
+ + L LL + G D+ F+V +T+ AH+ +LAARSPVFR FG G ++V R+ I
Sbjct: 180 MGQGLKDLLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPI--GNNNVDRIVI 237
Query: 242 DAMKVQDFEALLHYMYTDSLP---EMKGGEXXXXXXXXX----XXXNRYKMERLRLVCEH 294
D ++ F+A+L ++YTD LP E+ G + Y + RL+++CE
Sbjct: 238 DDIEPSIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARLKILCEV 297
Query: 295 KLCEYVNGRTVVAMLAFAGEHQCNGLKEKCLRFLDDPVKLRLIVQAEGVENLSKSYPSIL 354
LCE ++ V LA A +HQ LK CL F+ P L ++++EG ++L +S P++L
Sbjct: 298 LLCEKLDVDNVATTLALAEQHQFLQLKAFCLEFVASPANLGAVMKSEGFKHLKQSCPTLL 357
Query: 355 KDVIAKFVA 363
+++ A
Sbjct: 358 SELLNTVAA 366
>AT5G19000.2 | chr5:6342563-6344641 FORWARD LENGTH=443
Length = 442
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 195/400 (48%), Gaps = 82/400 (20%)
Query: 23 SGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHLRYYPNGFN-SDCAECISIFLQL 81
+G H KI GYS K + G + S +F GG+SW + +YP+G + D + +S+F+ L
Sbjct: 33 NGFHEFKICGYSLAKG-VGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIAL 91
Query: 82 DYNVMKGVKAQYKFSLLDRARKPSYSRSS--GKADVFLNTG----------WGYRTYIER 129
+ V+A ++ +L+D++ + S G+A L++G WGY+ + R
Sbjct: 92 A-SEGADVRALFELTLVDQSGNGKHKVHSHFGRA---LDSGPYTLKYRGSMWGYKRFFRR 147
Query: 130 GLLESSEYLRDDCLTIVCDFTVFKDL----RTEDIDVDDAMXXXXXXXXXXXXXSDLHRH 185
LESS+YL+++ L + C V K + R +I V S+L +
Sbjct: 148 SSLESSDYLKENSLLVRCRVGVVKSVTEGPRYYNIPVP---------------VSNLGQQ 192
Query: 186 LGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVVRVNIDAMK 245
LG LL +G+G DV F+V+G+TF AH+ VLA RSPVF LFG G + + I+ M+
Sbjct: 193 LGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPL--GDRNTKCITIEDME 250
Query: 246 VQDF-----------------------------------EALLHYMYTDSLPEMK---GG 267
F + LLH++Y D LP+M+ G
Sbjct: 251 APIFKVLPLTLLLIVYSRMYHPGSSPGALLLFSSLLTRDKVLLHFIYWDELPDMQELIGT 310
Query: 268 EXXXXXXXXX----XXXNRYKMERLRLVCEHKLCEYVNGRTVVAMLAFAGEHQCNGLKEK 323
+ +RY +ERL+ +CE KLCE V TV LA A +H C LK
Sbjct: 311 DSTLASTLVAQHLLAAADRYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAV 370
Query: 324 CLRFLDDPVKLRLIVQAEGVENLSKSYPSILKDVIAKFVA 363
CL+F+ P L+ ++Q +G + L +S PS+L +++ ++VA
Sbjct: 371 CLKFVALPENLKAVMQTDGFDYLKESCPSLLTELL-QYVA 409
>AT3G03740.1 | chr3:937106-939807 REVERSE LENGTH=466
Length = 465
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 184/372 (49%), Gaps = 41/372 (11%)
Query: 9 TPVRSASAVIAGTESGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHLRYYPNGFN 68
+P + S + T +G H I GYS K + G I S +F GG+ W + +YP+G N
Sbjct: 32 SPPTTTSLSVTQTINGSHSFTIKGYSLAKG-IGIGKHIASDTFTVGGYQWAIYFYPDGKN 90
Query: 69 -SDCAECISIFLQLDYNVMKGVKAQYKFSLLDRARKPSYSRSSGKADVFLNTG------- 120
D + +S+F+ L + V+A ++ SLLD++ K + S D L +G
Sbjct: 91 PEDNSAYVSVFIALASDGTD-VRALFELSLLDQSGKGKHKVHS-HFDRALESGPYTLKYR 148
Query: 121 ---WGYRTYIERGLLESSEYLRDDCLTIVCDFTVFKDLRTEDIDVDDAMXXXXXXXXXXX 177
WGY+ + R +LE+S++L+DDCL I C V +ID
Sbjct: 149 GSMWGYKRFFRRLMLETSDFLKDDCLKINCTVGVV----VSEIDC-------PRLHSIHV 197
Query: 178 XXSDLHRHLGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVV 237
SD+ H G LL +G+D+TF V G+ F AHR VLAARSPVF + F TG D +
Sbjct: 198 PASDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFE-SEFLDVTGEEDRDI 256
Query: 238 RVNIDAMKVQDFEALLHYMYTDSLPE-----------MKGGEXXXXXXXXXXXXNRYKME 286
V M+ + F+ALLHY+Y D+L E + ++YK+
Sbjct: 257 EVT--DMEPKVFKALLHYIYKDALIEDAESSSSSGSSVGPSASDTLAAKLLGAADKYKLP 314
Query: 287 RLRLVCEHKLCEYVNGRTVVAMLAFAGEHQCNGLKEKCLRFLDDPVKLRLIVQAEGVENL 346
RL L+CE LC+ ++ +V +LA A + + LK CL+F + L +++++G + L
Sbjct: 315 RLSLMCESVLCKDISVDSVANILALADRYNASALKSVCLKFAAE--NLIAVMRSDGFDYL 372
Query: 347 SKSYPSILKDVI 358
+ PS+ +++
Sbjct: 373 REHCPSLQSELL 384
>AT3G43700.1 | chr3:15601944-15603499 FORWARD LENGTH=416
Length = 415
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 183/385 (47%), Gaps = 53/385 (13%)
Query: 1 MPTATGSRTPVRSASAVIAGTESGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHL 60
+P S T RS + T +G H I GYS K + G I S +F GG+ W +
Sbjct: 17 IPDQIESPTSSRS----VTQTTNGSHQFVIQGYSLAKG-IGVGKHIASDNFSVGGYQWTI 71
Query: 61 RYYPNGFN-SDCAECISIFLQLDYNVMKGVKAQYKFSLLDRARK------PSYSRSSGKA 113
YP+G N D + +S+F+ L + V+A ++ SL+D++ K ++RS
Sbjct: 72 FVYPDGKNPEDNSSYVSVFIVLASECTE-VRALFELSLVDQSGKGKHKVHSHFNRSLDGG 130
Query: 114 DVFLN---TGWGYRTYIERGLLESSEYLRDDCLTIVCDFTVFKD----LRTEDIDVDDAM 166
L + WGY+ + R LLE+S+YL+DDCL I C V R I V D
Sbjct: 131 PYTLKYRGSMWGYKRFFRRSLLETSDYLKDDCLKINCTVGVVVSEMHCPRLLSIHVPD-- 188
Query: 167 XXXXXXXXXXXXXSDLHRHLGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALF 226
S+L H G LL T +G+DVTF+V G+ F AH+ VLAARS FR +
Sbjct: 189 -------------SELGSHFGKLLDTLQGSDVTFDVAGEKFQAHKLVLAARSQFFRSMFY 235
Query: 227 GATTGGADDVVRVNIDAMKVQDFEALLHYMYTDSLPE------------MKGGEX-XXXX 273
DVV I ++ + F+ALLH+MY DSLP ++ E
Sbjct: 236 NTLAENNSDVV---ISDLEPKVFKALLHFMYKDSLPGDVEPLTAHSFDLLRPSEIDDTLI 292
Query: 274 XXXXXXXNRYKMERLRLVCEHKLCEYVNGRTVVAMLAFAGEHQCNGLKEKCLRFLDDPVK 333
Y + RLRL+CE +C+ ++ +V +LA + ++ + LK L+F +
Sbjct: 293 VKLLAAAEMYNLSRLRLLCESHICKGISISSVSKILALSDKYNASELKSVSLKFTAE--N 350
Query: 334 LRLIVQAEGVENLSKSYPSILKDVI 358
L ++Q + E+L P++ +++
Sbjct: 351 LAAVLQTKAYEDLKDDCPNLQSELL 375
>AT5G21010.1 | chr5:7136062-7138374 FORWARD LENGTH=411
Length = 410
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 167/342 (48%), Gaps = 47/342 (13%)
Query: 13 SASAVIAGTESGQHHLKIDGYSRIKDELPTGSDIKSRSFRAGGHSWHLRYYPNGFN-SDC 71
++S + T +G H I GYS K + G I S +F GG+ W + +YP+G N D
Sbjct: 18 TSSKSVTQTVNGSHQFVIQGYSLAKG-MGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDN 76
Query: 72 AECISIFLQLDYNVMKGVKAQYKFSLLDRARK------PSYSRSSGKADVFLN---TGWG 122
+ +S+F+ L + V+A ++ +L+D++ K + RS L + WG
Sbjct: 77 SSYVSVFIALASEGTE-VRALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSMWG 135
Query: 123 YRTYIERGLLESSEYLRDDCLTIVCDFTVFKD----LRTEDIDVDDAMXXXXXXXXXXXX 178
Y+ + R +LE+S+YL+DDCL I C V + + V D
Sbjct: 136 YKRFFRRSILETSDYLKDDCLIINCTVGVVVSEILCPQLHSVHVPD-------------- 181
Query: 179 XSDLHRHLGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVVR 238
S+L H G LL + EG+D+TF + G+ F AH+ VLAARSP F+ F +
Sbjct: 182 -SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEA---NNTE 237
Query: 239 VNIDAMKVQDFEALLHYMYTDSLPE------------MKGGEX-XXXXXXXXXXXNRYKM 285
V I+ ++ + F+ALL +MY DSLPE +K E ++Y +
Sbjct: 238 VTINDLEPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDL 297
Query: 286 ERLRLVCEHKLCEYVNGRTVVAMLAFAGEHQCNGLKEKCLRF 327
RLRL+CE +C+ V+ ++V +LA A + LK CL+F
Sbjct: 298 IRLRLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKF 339
>AT1G55760.1 | chr1:20847117-20848507 REVERSE LENGTH=330
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 186 LGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVVRVNIDAMK 245
LG +L D+T + AHR VLAARSPVFR ++ +N+ M
Sbjct: 154 LGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDL--KEKELSEINVLDMP 211
Query: 246 VQDFEALLHYMYTDSLPEMKGGEXXXXXXXXXXXXNRYKMERLRLVCEHKLCEYVNGRTV 305
+ +A L Y+Y + ++ + +Y + L+ C L + ++ + V
Sbjct: 212 LDACQAFLSYIYGN----IQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKNV 267
Query: 306 VAMLAFAGEHQCNGLKEKCLRFL 328
+ L A +Q LK C+R+L
Sbjct: 268 LERLQNAYLYQLPELKASCMRYL 290
>AT5G19330.1 | chr5:6508095-6512701 REVERSE LENGTH=711
Length = 710
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 196 ADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGG--ADDVVRVNIDAMKVQDFEALL 253
+DVTF VEG+TF AHR L A S FR A+F GG D + I +K + FE ++
Sbjct: 541 SDVTFLVEGRTFYAHRICLLASSDAFR-AMFD---GGYREKDARDIEIPNIKWEVFELMM 596
Query: 254 HYMYTDSLPEMKGGEXXXXXXXXXXXXNRYKMERLRLVCEHKLCEYVNGRTVVAMLAFAG 313
++YT S+ ++Y +E L+ +CE+ + + + ++ M +
Sbjct: 597 RFIYTGSV-----DITNEISKDLLRAADQYLLEGLKRLCEYTIAQDITLESIGDMYELSE 651
Query: 314 EHQCNGLKEKCLRFL 328
L++ C+ F+
Sbjct: 652 AFHAMSLRQACIMFI 666
>AT1G21780.1 | chr1:7652476-7653866 FORWARD LENGTH=327
Length = 326
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 186 LGGLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFRVALFGATTGGADDVVRVNIDAMK 245
L +L DV T +AH+ +L+A S VF+ ++F + ++ID M
Sbjct: 151 LSRMLEESILTDVIIHTADGTLSAHKAILSASSTVFK-SMFHHDLMEKESST-IHIDDMS 208
Query: 246 VQDFEALLHYMYTDSLPEMKGGEXXXXXXXXXXXXNRYKMERLRLVCEHKLCEYVNGRTV 305
+ ALL Y+Y + E E N+Y + L+ CE L E +N V
Sbjct: 209 RESCMALLSYLYGNITQE----EFWKHRLALLGAANKYDITDLKAACEESLMEDINSSNV 264
Query: 306 VAMLAFAGEHQCNGLKEKCLRFLDD 330
+ L A +Q LK+ CL +L D
Sbjct: 265 LERLQEAWLYQLEKLKKGCLMYLFD 289
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,486,763
Number of extensions: 298633
Number of successful extensions: 708
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 690
Number of HSP's successfully gapped: 10
Length of query: 368
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 268
Effective length of database: 8,364,969
Effective search space: 2241811692
Effective search space used: 2241811692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)