BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0421900 Os04g0421900|AK066958
(1101 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21170.1 | chr1:7413050-7419411 FORWARD LENGTH=1091 1215 0.0
AT1G76850.1 | chr1:28848013-28854282 FORWARD LENGTH=1091 1215 0.0
>AT1G21170.1 | chr1:7413050-7419411 FORWARD LENGTH=1091
Length = 1090
Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1121 (55%), Positives = 795/1121 (70%), Gaps = 52/1121 (4%)
Query: 1 MASDSDVDEDELLQMALQEQAARDLSHQRPAGAG--KPVVNLVRPPANSSXXXXXXXXXX 58
M+S D+DEDELLQMAL+EQ+ RD+++Q+P A KPV NLV+ P
Sbjct: 1 MSSSDDLDEDELLQMALKEQSQRDVTYQKPPSANSRKPVTNLVQQP-------RRQKRAA 53
Query: 59 XXPAKA-RQPSRXXXXXXXXXSEVEMLSISSGDEDXXXXXXXXXXXXXXXXXXXXXXXXX 117
P+K + SR SEVE+LSISSGDED
Sbjct: 54 APPSKGGAKASRKPSMDEDDESEVELLSISSGDEDEGNDRGRGGGGDGGGGRGRGGSGKE 113
Query: 118 XXXXXXXXX-----XEPRSWKRVDEAELARRVREMREG----GXXXXXXXXXXXXXXXXX 168
EP WKRV+EAELAR+VR+MRE
Sbjct: 114 RGRARKEDDRAWDGVEPDCWKRVNEAELARKVRDMRESRTAPSVTQNLDRKVSGADKKVV 173
Query: 169 LTNVQTLPRGVEVLDPLGLGVIDNKSLRLITDASVSSPVSREKAQGLDPSMREKVIYSSP 228
LT++Q+ PRG+E +DPL LG+IDNK+LRLIT++S S KA+ +D ++REK++Y+S
Sbjct: 174 LTSLQSFPRGMECIDPLKLGIIDNKTLRLITESSES----LSKAEKVDNALREKLVYTSD 229
Query: 229 NFDPKVFLSWVHKDTSAADLESGALTLKTDLKGRTQQKKQLVKENFDCFVSCKTTIDDIE 288
+FDPK+F+S +H++TSAADLESGAL LK+DLKGR Q+KQLVK+NFDCFVSCKTTIDDIE
Sbjct: 230 HFDPKLFISRIHQETSAADLESGALALKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIE 289
Query: 289 SKLRQIEEDPEGAGTAHLYSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRTLF 348
SKL++IE+DP+G+GT HL++ + ++ ANRAFEPLFERQAQAEKIRSVQGMLQRFRTLF
Sbjct: 290 SKLKRIEDDPDGSGTTHLFNCMKSVTSRANRAFEPLFERQAQAEKIRSVQGMLQRFRTLF 349
Query: 349 NLPSAIRGNIRKGEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSME 408
NLPS IR +I KGEYDLAVREY+KAKSI LPSHV +LKRVLEEVEKVMQEF+G LY+SME
Sbjct: 350 NLPSIIRSSISKGEYDLAVREYKKAKSIALPSHVNLLKRVLEEVEKVMQEFKGTLYRSME 409
Query: 409 DPHLDLAELENIVRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTLDHEARMEVLQNKIR 468
DP +D LEN VRLLLELEPE+DPVWHYLN+QN RIHG+ EKCT DHEARME+L+N++
Sbjct: 410 DPKIDFTSLENTVRLLLELEPESDPVWHYLNVQNHRIHGMLEKCTFDHEARMEILRNQVH 469
Query: 469 EKILSDAKWRQLQQDSNK-SLEVDSATGDSFQDDQLSTNIMADEADSLRAAYIRRLTAVL 527
E+ LSDAKWRQ+QQ+ + S + S + Q DQ E D+LR YI+ LTAV+
Sbjct: 470 ERALSDAKWRQIQQNGVQLSDDTSSMEDNQVQVDQPLEESARREKDALRGRYIKILTAVI 529
Query: 528 IQHVPAFWRLALSVFSGKFAKAAAGNVLSDSDMNTKQSVNKTDDKGGEAKYTNHTLDEVA 587
+ H+P FW+ ALSVF+GKFAK++ N S +K ++K EA+Y++H+L+E+A
Sbjct: 530 VYHLPTFWKTALSVFTGKFAKSSQVN---------DTSASKAEEKAEEARYSSHSLEEIA 580
Query: 588 SMVRATVSAFDTKVQNTFRDFEECNILRPFMGDTIKEIAKACLTLEGKDSSP-TAVKMLR 646
M+R T+S ++ KVQ+TF DF+E IL P+M DTIKE++KAC E K+S+P +AV LR
Sbjct: 581 GMIRNTISVYEAKVQSTFHDFDESYILHPYMSDTIKEVSKACQAFEAKESAPHSAVMALR 640
Query: 647 ALHYEITKLYILRLCSWMRATTKEISKYETWFTLTTLERNKSLYAISSMPLEFRDIIVSA 706
+ EITK+YI RLCSWMRA+T+EISK ETW ++ LERN+S Y+IS +PL FR IIVS
Sbjct: 641 KVKVEITKIYIQRLCSWMRASTEEISKEETWIPVSILERNRSPYSISYLPLAFRSIIVSG 700
Query: 707 MDRIDFMVLNLRSETAKSYDISQHLHEIHESVRLAFLNSFLDFAGYLERFGGELAQNRSN 766
M++I+ M+L+L+ E A+S D+ H+ EI SVRLAFLN FLDFA +LE+ G +L+Q +
Sbjct: 701 MEQINMMILSLKGEAARSEDMFAHIEEILISVRLAFLNCFLDFAAHLEQIGADLSQRTTK 760
Query: 767 KENNHTQNGYVNGTNSETSAGMDG---DLYKKLLVVLSNIGYCKAELSDELYTKYRHIWS 823
+E+ QNGY N E S D +++LL++LSNIGYCK EL+ ELY KY++ W
Sbjct: 761 RES--WQNGYSNDHQEEQSINAPESVVDPHRQLLMILSNIGYCKDELASELYNKYKYTWL 818
Query: 824 PVRDNDERSADMRDLMTSFSALEEKVLEQYTFAKSNLIRNAARNYLLDYGIHWGAAPAVK 883
R NDE +D++DLM SFS L EKVLE YTFAK+NLIR AA NYLLD GI WGAAP VK
Sbjct: 819 QSRRNDEDISDLQDLMMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSGIQWGAAPPVK 878
Query: 884 GIRDAALDLLHILVAVHAEVYSGARPLLEKAMTILVEGLIDIFLSIFHENKTKELRMLDA 943
GIRDAA++LLH LVAVHAEV++GA+PLL+K + LVEGLID FLS+ EN++ +L +DA
Sbjct: 879 GIRDAAVELLHTLVAVHAEVFAGAKPLLDKILGTLVEGLIDTFLSLLDENRSDDLSSIDA 938
Query: 944 NGFCQLMLELEYFETILRTYLSTEAEQALRSLQENLLEKACESVTEALEN--PGHHRRPT 1001
NGFCQLMLELEYFETIL+ YL+ +A ++L+SLQ +LEKA ES++E +EN GH R+PT
Sbjct: 939 NGFCQLMLELEYFETILKPYLTVDATESLKSLQGAVLEKAIESISETVENNPGGHQRKPT 998
Query: 1002 RGSEDAASDDRQ-SVSPDDLLALAQQCSSDLLQGELEKTRLNIACFMESTLQSTPAPAGS 1060
RGSEDA SDD+Q SVSPDDLLALAQQC+S +LQ ELEKTRLN ACF+E T+ P P
Sbjct: 999 RGSEDAISDDKQSSVSPDDLLALAQQCTSGMLQLELEKTRLNSACFIE-TIPLDPVP--- 1054
Query: 1061 KPAAYQSYKAPATHQPVQVSSPSFRRQQTSTNSPAASRRRR 1101
P A +Y +T P S ++R Q SP +R RR
Sbjct: 1055 -PVAKAAYSRTSTDSP----SRNYRESQ-PMGSPVQARPRR 1089
>AT1G76850.1 | chr1:28848013-28854282 FORWARD LENGTH=1091
Length = 1090
Score = 1215 bits (3143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1119 (56%), Positives = 797/1119 (71%), Gaps = 48/1119 (4%)
Query: 1 MASDS-DVDEDELLQMALQEQAARDLSHQRP--AGAGKPVVNLVRPPANSSXXXXXXXXX 57
M+SDS D+DEDELLQMAL+EQA RDL++Q+P + A KPV NLV+ P
Sbjct: 1 MSSDSNDLDEDELLQMALKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPP 60
Query: 58 XXXPAKARQPSRXXXXXXXXXSEVEMLSISSGDEDXXXXXXXXXXXXXXXXXXXXXXXXX 117
A R+PS SEVE+LSISSGD+D
Sbjct: 61 KKSAAAVRKPS----MDEDEESEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREK 116
Query: 118 XXXXXXXXXX----EPRSWKRVDEAELARRVREMRE---GGXXXXXXXXXXXXXXXXXLT 170
EP WKRV+EAELARRVR+MRE LT
Sbjct: 117 GRARKEDDGAWDGGEPDCWKRVNEAELARRVRDMRESRTAPVVQKVEGKAPAPGKKVALT 176
Query: 171 NVQTLPRGVEVLDPLGLGVIDNKSLRLITDASVSSPVSREKAQGLDPSMREKVIYSSPNF 230
++Q+LPRG+E +DPL LG+IDNK+LRLIT++S SP KA+ +D ++REK++Y S +F
Sbjct: 177 SLQSLPRGMECIDPLKLGIIDNKTLRLITESS-GSP---SKAEKVDNTLREKLVYFSDHF 232
Query: 231 DPKVFLSWVHKDTSAADLESGALTLKTDLKGRTQQKKQLVKENFDCFVSCKTTIDDIESK 290
DPK+FLS +H+DT+AADLE+GAL LK+DLKGR Q+KQLVK+NFDCFVSCKTTIDDIESK
Sbjct: 233 DPKLFLSRIHQDTTAADLEAGALGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESK 292
Query: 291 LRQIEEDPEGAGTAHLYSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNL 350
L++IEEDPEG+GT HL++ + ++ AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNL
Sbjct: 293 LKRIEEDPEGSGTTHLFNCMKSVTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNL 352
Query: 351 PSAIRGNIRKGEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSMEDP 410
PS IR +I KGEYDLAVREY+KAKSI LPSHV ILKRVLEEVEKVM EF+G LYKSMEDP
Sbjct: 353 PSIIRSSISKGEYDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDP 412
Query: 411 HLDLAELENIVRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTLDHEARMEVLQNKIREK 470
+D LEN VRLLLELEPE+DPVWHYLN+QN RIHGL EKCT DHEAR+E+L+N EK
Sbjct: 413 KIDFTSLENTVRLLLELEPESDPVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEK 472
Query: 471 ILSDAKWRQLQQDS-NKSLEVDSATGDSFQDDQLSTNIMADEADSLRAAYIRRLTAVLIQ 529
+SDAKW+Q+QQ+ + S S ++ Q D S ++E D L+ YI+RLTAVL+
Sbjct: 473 AISDAKWQQIQQNGVSYSDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVH 532
Query: 530 HVPAFWRLALSVFSGKFAKAAAGNVLSDSDMNTKQSVNKTDDKGGEAKYTNHTLDEVASM 589
H+P FW+ A+S+FSGKFAK S T S NK ++K EA+Y+ H+L+EVA M
Sbjct: 533 HIPVFWKTAISIFSGKFAK---------SSQVTDTSANKAEEKVTEARYSTHSLEEVAGM 583
Query: 590 VRATVSAFDTKVQNTFRDFEECNILRPFMGDTIKEIAKACLTLEGKDSSP-TAVKMLRAL 648
+R T+S ++ KV +TF DF+E ILRPFM D I E++KAC E K+S+P +AV LR +
Sbjct: 584 IRKTISVYEAKVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKESTPHSAVVALRKI 643
Query: 649 HYEITKLYILRLCSWMRATTKEISKYETWFTLTTLERNKSLYAISSMPLEFRDIIVSAMD 708
EITK+YI RLCSWMRA+T+ ISK ETW ++ LERN+S YAIS +PL FR +IVS M+
Sbjct: 644 QAEITKIYIQRLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLPLAFRSVIVSGME 703
Query: 709 RIDFMVLNLRSETAKSYDISQHLHEIHESVRLAFLNSFLDFAGYLERFGGELAQNRSNKE 768
+++ M+L+++SE AKS D+ + EI SVRLAFLN FLDFA +LE+ G +L+Q+ S ++
Sbjct: 704 QVNLMILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQD 763
Query: 769 NNHTQNGYVNGTNSETSAGMDG---DLYKKLLVVLSNIGYCKAELSDELYTKYRHIWSPV 825
N +NGY + E SA G D +++LL+VLSNIGYCK EL+ ELY K+++ W
Sbjct: 764 N--WKNGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQS 821
Query: 826 RDNDERSADMRDLMTSFSALEEKVLEQYTFAKSNLIRNAARNYLLDYGIHWGAAPAVKGI 885
RD +E S+D++DL+ SFS L EKVLE YTFAK+NLIR AA NYLLD GI WG+AP VKGI
Sbjct: 822 RDKNEDSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGI 881
Query: 886 RDAALDLLHILVAVHAEVYSGARPLLEKAMTILVEGLIDIFLSIFHENKTKELRMLDANG 945
RDAA++LLH LVAVHAEV++GA+PLL+K + +L+EGLID FLS+ EN++ +LR +DANG
Sbjct: 882 RDAAVELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEENRSSDLRSIDANG 941
Query: 946 FCQLMLELEYFETILRTYLSTEAEQALRSLQENLLEKACESVTEALENPGHHRRPTRGSE 1005
FCQLM ELEYFET+L +Y ++ A ++L+SLQ +LE A ES++EA+E PGH+RRPTRGSE
Sbjct: 942 FCQLMFELEYFETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVETPGHNRRPTRGSE 1001
Query: 1006 DAASDDRQSVSPDDLLALAQQCSSDLLQGELEKTRLNIACFMEST-LQSTPAPAGSKPAA 1064
D SDD+QSVS DDLLAL +QCS++LLQ ELE+TR+N ACF ES L+STP A
Sbjct: 1002 DTVSDDKQSVSADDLLALTKQCSNELLQQELERTRVNTACFAESAPLESTPPLPK---AT 1058
Query: 1065 YQSYKAPATHQPVQVSSPS--FRRQQTSTNSPAASRRRR 1101
Y S++ + SPS +R Q S+ SP +R RR
Sbjct: 1059 YSSFRG-------SMDSPSRNYRGSQ-SSGSPINARPRR 1089
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,141,620
Number of extensions: 856854
Number of successful extensions: 2745
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2728
Number of HSP's successfully gapped: 4
Length of query: 1101
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 992
Effective length of database: 8,118,225
Effective search space: 8053279200
Effective search space used: 8053279200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)