BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0406600 Os04g0406600|AK103609
(436 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08250.1 | chr1:2588994-2590235 REVERSE LENGTH=414 572 e-164
AT3G44720.1 | chr3:16271759-16273033 FORWARD LENGTH=425 548 e-156
AT2G27820.1 | chr2:11856808-11858082 FORWARD LENGTH=425 546 e-156
AT5G22630.1 | chr5:7524645-7525922 FORWARD LENGTH=426 519 e-147
AT1G11790.1 | chr1:3981476-3984962 FORWARD LENGTH=393 399 e-111
AT3G07630.1 | chr3:2435457-2437530 FORWARD LENGTH=382 385 e-107
>AT1G08250.1 | chr1:2588994-2590235 REVERSE LENGTH=414
Length = 413
Score = 572 bits (1475), Expect = e-164, Method: Compositional matrix adjust.
Identities = 291/381 (76%), Positives = 322/381 (84%), Gaps = 9/381 (2%)
Query: 41 GRAEWQSSCAVLSSKVXXXXXXXXXXXXPSFVNGHVAPLVPEQQAAAEDGGAVLDLVPVS 100
GR+EWQSSCA+L+SKV P V+G V L AAA G ++LVP+
Sbjct: 27 GRSEWQSSCAILTSKVISQEESESLPVPP--VSGGVDHLNGHNSAAARVPG--MNLVPIE 82
Query: 101 SVNGGGVA----KNLPQPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYPGCDAI 156
+ + N +PL ++DLSPAPMHGS LRVAYQGVPGAYSE AAGKAYP C AI
Sbjct: 83 KSDSNPLVPQHRHNPLKPLSMTDLSPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCQAI 142
Query: 157 PCDQFEVAFSAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLMA 216
PCDQFEVAF AVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCL+A
Sbjct: 143 PCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLA 202
Query: 217 LPGVRKECLTRVMSHPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRDTAAIA 276
LPGVRKE LTRV+SHPQ LAQCEHTLT +GLNV REA DDTAGAAE++A+N LRDTAAIA
Sbjct: 203 LPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIA 262
Query: 277 SSRAAELYGMEVLADGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVFAHDKEGTSVLF 336
S+RAAE+YG+E+L DGIQDD NVTRFVMLAREPI+PRTDRPFKTSIVFAH+K GTSVLF
Sbjct: 263 SARAAEIYGLEILEDGIQDDVSNVTRFVMLAREPIIPRTDRPFKTSIVFAHEK-GTSVLF 321
Query: 337 KVLSAFAFRDITLTKIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAEPRAQNA 396
KVLSAFAFRDI+LTKIESRP+ +RPIR+VDDANVGTAKHFEYMFYVDF+AS+AE RAQNA
Sbjct: 322 KVLSAFAFRDISLTKIESRPNHNRPIRVVDDANVGTAKHFEYMFYVDFEASMAEARAQNA 381
Query: 397 LAEVQEYTSFLRVLGSYPMDM 417
LAEVQE+TSFLRVLGSYPMDM
Sbjct: 382 LAEVQEFTSFLRVLGSYPMDM 402
>AT3G44720.1 | chr3:16271759-16273033 FORWARD LENGTH=425
Length = 424
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/391 (71%), Positives = 316/391 (80%), Gaps = 18/391 (4%)
Query: 33 SLQGAVVGGRAEWQSSCAVLSSKVXXXXXXXXXXXXPSFVNGHVAPLVPEQQAAAEDGGA 92
S V R++WQSSCA+LSSKV + VNGH +G
Sbjct: 43 SFPNGVSVSRSDWQSSCAILSSKVASVENTGGLADKIAAVNGHT------------NGSV 90
Query: 93 VLDLVPVSSVNGGGVAKNLP-QPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYP 151
L LV V S NG K P QPL I+DLSPAP+HGS LRVAYQGVPGAYSE AAGKAYP
Sbjct: 91 NLGLVAVESTNG----KLAPAQPLTITDLSPAPLHGSSLRVAYQGVPGAYSEAAAGKAYP 146
Query: 152 GCDAIPCDQFEVAFSAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVH 211
CDAIPCDQF+VAF AVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQ+PVH
Sbjct: 147 NCDAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVH 206
Query: 212 HCLMALPGVRKECLTRVMSHPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRD 271
HCL+ALPGVR +C++RV+SHPQALAQ EH+L + + REAF DTA AAEY++AN L D
Sbjct: 207 HCLLALPGVRTDCVSRVISHPQALAQTEHSLDVLTPHAAREAFHDTAAAAEYISANDLHD 266
Query: 272 TAAIASSRAAELYGMEVLADGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVF-AHDKE 330
TAA+AS+RAAELY +++LADGIQDD GNVTRF+MLAREPI+PRTDRPFKTSIVF A + +
Sbjct: 267 TAAVASARAAELYNLQILADGIQDDPGNVTRFLMLAREPIIPRTDRPFKTSIVFAAQEHK 326
Query: 331 GTSVLFKVLSAFAFRDITLTKIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAE 390
GTSVLFKVLSAFAFRDI+LTKIESRPH +RP+R+V D + GT+K+FEYMFYVDF+AS+AE
Sbjct: 327 GTSVLFKVLSAFAFRDISLTKIESRPHHNRPLRVVGDGSFGTSKNFEYMFYVDFEASMAE 386
Query: 391 PRAQNALAEVQEYTSFLRVLGSYPMDMTPMT 421
PRAQNALAEVQEYTSFLRVLGSYPMDMTP +
Sbjct: 387 PRAQNALAEVQEYTSFLRVLGSYPMDMTPWS 417
>AT2G27820.1 | chr2:11856808-11858082 FORWARD LENGTH=425
Length = 424
Score = 546 bits (1408), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/378 (74%), Positives = 307/378 (81%), Gaps = 23/378 (6%)
Query: 49 CAVLSSKVXXXXXXXXXXXXP--------SFVNGHVAPLVPEQQAAAEDGGAVLDLVPVS 100
CA+LSSKV S VNGH +G V DL V
Sbjct: 46 CAILSSKVNSQEQSESLSSNSNGSSSYHVSAVNGH------------NNGAGVSDLNLVP 93
Query: 101 SVNGGGVAKNLPQPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYPGCDAIPCDQ 160
N + +PL ISDLSPAPMHGS LRVAYQGVPGAYSE AAGKAYP C AIPCDQ
Sbjct: 94 FNNNQSIQSK--KPLSISDLSPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCQAIPCDQ 151
Query: 161 FEVAFSAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLMALPGV 220
FEVAF AVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCL+ALPGV
Sbjct: 152 FEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLIALPGV 211
Query: 221 RKECLTRVMSHPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRDTAAIASSRA 280
RKE LTRV+SHPQ LAQCEHTLT +GLNV REA DDTAGAAE++AAN +RDTAAIAS+RA
Sbjct: 212 RKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIRDTAAIASARA 271
Query: 281 AELYGMEVLADGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVFAHDKEGTSVLFKVLS 340
AE+YG+E+L DGIQDD NVTRFVMLAREPI+PRTDRPFKTSIVFAH+K GT VLFKVLS
Sbjct: 272 AEIYGLEILEDGIQDDASNVTRFVMLAREPIIPRTDRPFKTSIVFAHEK-GTCVLFKVLS 330
Query: 341 AFAFRDITLTKIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAEPRAQNALAEV 400
AFAFR+I+LTKIESRP+ + PIRLVD+ANVGTAKHFEYMFY+DF+AS+AE RAQNAL+EV
Sbjct: 331 AFAFRNISLTKIESRPNHNVPIRLVDEANVGTAKHFEYMFYIDFEASMAESRAQNALSEV 390
Query: 401 QEYTSFLRVLGSYPMDMT 418
QE+TSFLRVLGSYPMDMT
Sbjct: 391 QEFTSFLRVLGSYPMDMT 408
>AT5G22630.1 | chr5:7524645-7525922 FORWARD LENGTH=426
Length = 425
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/390 (70%), Positives = 310/390 (79%), Gaps = 19/390 (4%)
Query: 33 SLQGAVVGGRAEWQSSCAVLSSKVXXXXXXXXXXXXPSFVNGHVAPLVPEQQAAAEDGGA 92
S V RA+WQSSCA+L+SKV + VNGH +G
Sbjct: 47 SFPNGVGSSRADWQSSCAILASKVVSAENSSSV----AVVNGH------------SNGSV 90
Query: 93 VLDLVPVSSVNGGGVAKNLPQPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYPG 152
L LVP S + G L QPL I+DLSPAP HGS LRVAYQGVPGAYSE AAGKAYP
Sbjct: 91 DLSLVPSKSQHNG--KPGLIQPLTITDLSPAPSHGSTLRVAYQGVPGAYSEAAAGKAYPN 148
Query: 153 CDAIPCDQFEVAFSAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHH 212
+AIPCDQF+VAF AVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQ+PVHH
Sbjct: 149 SEAIPCDQFDVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHH 208
Query: 213 CLMALPGVRKECLTRVMSHPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRDT 272
CL+ALPGVR +C+TRV+SHPQALAQ E +L + EAF DTA AAEY+AAN L DT
Sbjct: 209 CLLALPGVRTDCITRVISHPQALAQTEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDT 268
Query: 273 AAIASSRAAELYGMEVLADGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVF-AHDKEG 331
AA+AS+RAAELYG+++LADGIQDD GNVTRF+MLAR+PI+PRTDRPFKTSIVF A + +G
Sbjct: 269 AAVASARAAELYGLQILADGIQDDAGNVTRFLMLARDPIIPRTDRPFKTSIVFAAQEHKG 328
Query: 332 TSVLFKVLSAFAFRDITLTKIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAEP 391
TSVLFKVLSAFAFR+I+LTKIESRPH++ P+R+V D NVGT+KHFEY FYVDF+AS+AE
Sbjct: 329 TSVLFKVLSAFAFRNISLTKIESRPHQNCPVRVVGDENVGTSKHFEYTFYVDFEASMAEA 388
Query: 392 RAQNALAEVQEYTSFLRVLGSYPMDMTPMT 421
RAQNALAEVQEYTSFLRVLGSYPMDMTP +
Sbjct: 389 RAQNALAEVQEYTSFLRVLGSYPMDMTPWS 418
>AT1G11790.1 | chr1:3981476-3984962 FORWARD LENGTH=393
Length = 392
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/307 (59%), Positives = 246/307 (80%), Gaps = 3/307 (0%)
Query: 111 LPQPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYPGCDAIPCDQFEVAFSAVEL 170
LP+PL + L + S++R+++QG+PGAYSE AA KA+P C+ +PC+QFE AF AVEL
Sbjct: 87 LPKPLTANSLYSSDGDDSKVRISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVEL 146
Query: 171 WIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLMALPGVRKECLTRVMS 230
W+ D+AVLP+ENS+GGSIHRNYDLLLRHRLHIV EV LPV+HCL+ +PGV+KE + V+S
Sbjct: 147 WLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLS 206
Query: 231 HPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRDTAAIASSRAAELYGMEVLA 290
HPQAL QC ++L +G+ R + DTA AA+ V+++G D AIAS RAA +YG+++LA
Sbjct: 207 HPQALDQCVNSLNNLGIQ--RISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILA 264
Query: 291 DGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVFAHDKEGTSVLFKVLSAFAFRDITLT 350
+ IQDD NVTRF++LAREP++PRTDRP+KTSIVF+ + EG VLFK L+ FA R I L+
Sbjct: 265 ENIQDDVNNVTRFLILAREPMIPRTDRPYKTSIVFSLE-EGPGVLFKALAVFALRSINLS 323
Query: 351 KIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAEPRAQNALAEVQEYTSFLRVL 410
KIESRP R RP+R+VD +N G+AK+F+Y+FY+DF+AS+A+ RAQ+AL +QE+ SF+R+L
Sbjct: 324 KIESRPQRRRPLRVVDGSNNGSAKYFDYLFYIDFEASMADTRAQHALGHLQEFASFIRIL 383
Query: 411 GSYPMDM 417
G YPMD+
Sbjct: 384 GCYPMDL 390
>AT3G07630.1 | chr3:2435457-2437530 FORWARD LENGTH=382
Length = 381
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 241/308 (78%), Gaps = 8/308 (2%)
Query: 111 LPQPLRISDLSPAPMHGSQLRVAYQGVPGAYSEKAAGKAYPGCDAIPCDQFEVAFSAVEL 170
LP+PL + L+ + +GS++RVAYQGV GAYSE AA KAYP C+A+PC++F+ AF AVE
Sbjct: 80 LPKPLSSNQLTESVSNGSRVRVAYQGVRGAYSESAAEKAYPNCEAVPCEEFDTAFEAVER 139
Query: 171 WIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLMALPGVRKECLTRVMS 230
W+ DRAVLP+ENSLGGSIHRNYDLLLRH LHIVGEV+L V HCL+A GV E L RV+S
Sbjct: 140 WLVDRAVLPIENSLGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRVLS 199
Query: 231 HPQALAQCEHTLTAMGLNVVREAFDDTAGAAEYVAANGLRDTAAIASSRAAELYGMEVLA 290
HPQALAQCE+TLT +GL VREA DDTAGAA+ +A L D AA+AS +AA++YG+ ++A
Sbjct: 200 HPQALAQCENTLTKLGL--VREAVDDTAGAAKQIAFENLNDAAAVASEKAAKIYGLNIVA 257
Query: 291 DGIQDDCGNVTRFVMLAREPIVPRTDRPFKTSIVFAHDKEGTSVLFKVLSAFAFRDITLT 350
IQDDC NVTRF+MLAREPI+P T+R FKTSIVF+ + EG VLFK L+ FA R I LT
Sbjct: 258 KDIQDDCDNVTRFLMLAREPIIPGTNRLFKTSIVFSLE-EGPGVLFKALAVFALRQINLT 316
Query: 351 KIESRPHRHRPIRLVDDANVGTAKHFEYMFYVDFQASLAEPRAQNALAEVQEYTSFLRVL 410
KIESRP R P+R G K+F+Y+FYVDF+AS+A+ AQNAL ++E+ +FLRVL
Sbjct: 317 KIESRPLRKHPLRA-----SGGLKYFDYLFYVDFEASMADEVAQNALRHLEEFATFLRVL 371
Query: 411 GSYPMDMT 418
GSYP+D T
Sbjct: 372 GSYPVDTT 379
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,138,310
Number of extensions: 313971
Number of successful extensions: 571
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 558
Number of HSP's successfully gapped: 6
Length of query: 436
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 334
Effective length of database: 8,310,137
Effective search space: 2775585758
Effective search space used: 2775585758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)