BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0402100 Os04g0402100|AK069118
(537 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G61790.1 | chr5:24827394-24829642 REVERSE LENGTH=531 625 e-179
AT5G07340.2 | chr5:2317300-2319458 FORWARD LENGTH=541 617 e-177
AT1G09210.1 | chr1:2973217-2976655 REVERSE LENGTH=425 192 5e-49
AT1G56340.1 | chr1:21090059-21092630 REVERSE LENGTH=426 191 1e-48
AT1G08450.1 | chr1:2668008-2671800 REVERSE LENGTH=425 152 5e-37
>AT5G61790.1 | chr5:24827394-24829642 REVERSE LENGTH=531
Length = 530
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/439 (69%), Positives = 348/439 (79%)
Query: 26 LFYEPFDESFEGRWVLSGKDDYKGVWKHEKSDGHEDYGLLVSEKAKKYAIIKELDEPVTL 85
+ YE FDE F+GRW++S DY+GVWKH KS+GHEDYGLLVSEKA+KY I+KELDEP+ L
Sbjct: 30 VLYESFDEPFDGRWIVSKNSDYEGVWKHAKSEGHEDYGLLVSEKARKYGIVKELDEPLNL 89
Query: 86 KDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCGSTNKV 145
K+GTVVLQ+EVR Q GLECGGAYLKY+RPQ+A W + FD+E+PY+IMFGPDKCG TNKV
Sbjct: 90 KEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNKV 149
Query: 146 HFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANFLS 205
HFILKHKNPK+G+YVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKAN LS
Sbjct: 150 HFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLS 209
Query: 206 ADDFEPSLIPSKTIXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEEATKPEG 265
+DFEP+LIP+KTI RAKIPDP+AVKP+DWDEDAPMEIEDEEA KPEG
Sbjct: 210 GEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIEDEEAEKPEG 269
Query: 266 WLXXXXXXXXXXXANKPXXXXXXXXXXXXAPKIDNPKCEEAPGCGEWKRPMKQNPAYKGK 325
WL A KP APKIDNPKCE APGCGEWKRPMK+NPAYKGK
Sbjct: 270 WLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGK 329
Query: 326 WHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWTMQDGILFDNILIADD 385
W +PLIDNP YKGIWKP++IPNP+YFELD+PD +PIAAIGIEIWTMQDGILFDNILIA D
Sbjct: 330 WSSPLIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKD 389
Query: 386 EKVATSILEKSWKPKYXXXXXXXXXXXXXXXXGDGLSEFQKKIFDVLYKLADIPFLEPYK 445
EKVA + + +WKPK+ DGL +QK +FD+L K+AD+ FL YK
Sbjct: 390 EKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYK 449
Query: 446 TKIIDVIEKGEKQPNITIG 464
+KI ++IEK E+QPN+TIG
Sbjct: 450 SKITELIEKAEQQPNLTIG 468
>AT5G07340.2 | chr5:2317300-2319458 FORWARD LENGTH=541
Length = 540
Score = 617 bits (1590), Expect = e-177, Method: Compositional matrix adjust.
Identities = 297/441 (67%), Positives = 347/441 (78%), Gaps = 2/441 (0%)
Query: 26 LFYEPFDESFEGRWVLSGKDDYKGVWKHEKSDGHEDYGLLVSEKAKKYAIIKELD--EPV 83
+ YE FDE F+GRWV+S K +Y+GVWKHEKS+GH+DYGLLVSEKAKKY I+KELD EP+
Sbjct: 38 ILYESFDEPFDGRWVVSEKAEYQGVWKHEKSEGHDDYGLLVSEKAKKYGIVKELDVDEPL 97
Query: 84 TLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCGSTN 143
L +GTVVLQ+E R Q GLECGGAYLKY+RPQ+A W + FDN++PY+IMFGPDKCG+TN
Sbjct: 98 NLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCGATN 157
Query: 144 KVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANF 203
KVHFILKHKNPK+G++VEHHLKFPPSVP+D LSHVYTA+LK DNEVRILVDGEEKKK N
Sbjct: 158 KVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNL 217
Query: 204 LSADDFEPSLIPSKTIXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEIEDEEATKP 263
LSA+DFEP LIPSKTI RAKIPDP+AVKPDDWDEDAPMEIEDEEA KP
Sbjct: 218 LSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAPMEIEDEEAEKP 277
Query: 264 EGWLXXXXXXXXXXXANKPXXXXXXXXXXXXAPKIDNPKCEEAPGCGEWKRPMKQNPAYK 323
EGWL A+KP APK+ N KCE APGCGEWKRPMK+NPAYK
Sbjct: 278 EGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEWKRPMKRNPAYK 337
Query: 324 GKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWTMQDGILFDNILIA 383
GKW +PLIDNP YKGIWKP++IPNP+YFEL++P+ +PIAAIGIEIWTMQDGILFDNILI+
Sbjct: 338 GKWSSPLIDNPAYKGIWKPRDIPNPDYFELERPNLEPIAAIGIEIWTMQDGILFDNILIS 397
Query: 384 DDEKVATSILEKSWKPKYXXXXXXXXXXXXXXXXGDGLSEFQKKIFDVLYKLADIPFLEP 443
DEKVA + + +WKPK+ DGL +QKK+FD+LYK+ADI FL
Sbjct: 398 KDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSA 457
Query: 444 YKTKIIDVIEKGEKQPNITIG 464
YK+KI+++IEK E QPN+TIG
Sbjct: 458 YKSKIMELIEKAETQPNLTIG 478
>AT1G09210.1 | chr1:2973217-2976655 REVERSE LENGTH=425
Length = 424
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 190/387 (49%), Gaps = 59/387 (15%)
Query: 18 VQIRASDPLFYEPFDESFEGRWVLS---GKDDYKGVWKHEK---SDGHEDYGLLVSEKAK 71
V I ++ +F E FD+ +E RWV S D+ G WKH S D G+ SE +
Sbjct: 17 VAIASAAVIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYR 76
Query: 72 KYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYT 131
YAI E E + KD T+V QF V+ + L+CGG Y+K + D K+F +TPY+
Sbjct: 77 FYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS---GDVDQKKFGGDTPYS 132
Query: 132 IMFGPDKCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVR 190
IMFGPD CG ST KVH IL + H +K D+L+HVYT IL+PD
Sbjct: 133 IMFGPDICGYSTKKVHAILTYNE------ANHLIKKDVPCETDQLTHVYTFILRPDATYS 186
Query: 191 ILVDGEEKKKANFLSADDFEPSLIPSKTIXXXXXXXXXXXXXRAKIPDPDAVKPDDWDED 250
IL+D EK+ + S D L+P K KI DP A KP+DWDE
Sbjct: 187 ILIDNVEKQTGSLYSDWD----LLPPK-----------------KIKDPSAKKPEDWDEQ 225
Query: 251 APMEIEDEEATKPEGWLXXXXXXXXXXXANKPXXXXXXXXXXXXAPKIDNPKCEEAPGCG 310
I D E KP+G+ + KP AP I NP+ G
Sbjct: 226 E--YISDPEDKKPDGY-DDIPKEIPDTDSKKPEDWDDEEDGEWTAPTIPNPEY-----MG 277
Query: 311 EWKRPMKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWT 370
EWK +NP YKGKW APLIDNP++K +PE + K + +G+E+W
Sbjct: 278 EWKPKQIKNPNYKGKWEAPLIDNPDFKD--------DPELYVFPK-----LKYVGLELWQ 324
Query: 371 MQDGILFDNILIADDEKVATSILEKSW 397
++ G LFDN+LI DD A + +++W
Sbjct: 325 VKSGSLFDNVLICDDPDYAKKLADETW 351
>AT1G56340.1 | chr1:21090059-21092630 REVERSE LENGTH=426
Length = 425
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 193/387 (49%), Gaps = 59/387 (15%)
Query: 18 VQIRASDPLFYEPFDESFEGRWVLSG---KDDYKGVWKHEK---SDGHEDYGLLVSEKAK 71
V I +++ +F E F++ +E RWV S D+ G WKH S D G+ SE +
Sbjct: 17 VVIVSAEVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYR 76
Query: 72 KYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYT 131
YAI E E + KD T+V QF V+ + L+CGG Y+K + D +F +TPY+
Sbjct: 77 FYAISAEFPE-FSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDV---DQTKFGGDTPYS 132
Query: 132 IMFGPDKCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVR 190
IMFGPD CG ST KVH IL + H +K D+L+HVYT +L+PD
Sbjct: 133 IMFGPDICGYSTKKVHAILTYNG------TNHLIKKEVPCETDQLTHVYTFVLRPDATYS 186
Query: 191 ILVDGEEKKKANFLSADDFEPSLIPSKTIXXXXXXXXXXXXXRAKIPDPDAVKPDDWDED 250
IL+D EK+ + S D L+P+K KI DP A KP+DWD+
Sbjct: 187 ILIDNVEKQTGSLYSDWD----LLPAK-----------------KIKDPSAKKPEDWDDK 225
Query: 251 APMEIEDEEATKPEGWLXXXXXXXXXXXANKPXXXXXXXXXXXXAPKIDNPKCEEAPGCG 310
I D E TKP G+ A KP AP I NP+ G
Sbjct: 226 E--YIPDPEDTKPAGY-DDIPKEIPDTDAKKPEDWDDEEDGEWTAPTIPNPEYN-----G 277
Query: 311 EWKRPMKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWT 370
EWK +NPAYKGKW AP+IDNP +K +PE + K + +G+E+W
Sbjct: 278 EWKPKKIKNPAYKGKWKAPMIDNPEFKD--------DPELYVFPK-----LKYVGVELWQ 324
Query: 371 MQDGILFDNILIADDEKVATSILEKSW 397
++ G LFDN+L++DD + A + E++W
Sbjct: 325 VKSGSLFDNVLVSDDPEYAKKLAEETW 351
>AT1G08450.1 | chr1:2668008-2671800 REVERSE LENGTH=425
Length = 424
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 181/379 (47%), Gaps = 59/379 (15%)
Query: 23 SDPLFYEPFDESFEGRWVLSG---KDDYKGVWKHEKSD---GHEDYGLLVSEKAKKYAII 76
S+ E F+ ++ RWVLS + G +KH ++ G+ AK YAI
Sbjct: 28 SEIFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAIS 87
Query: 77 KELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGP 136
++ E + K+ T+V+Q+ V+++ +ECGGAY+K + + K+F +TPY++MFGP
Sbjct: 88 AKIPE-FSNKNRTLVVQYSVKIEQDIECGGAYIKLL---SGYVNQKQFGGDTPYSLMFGP 143
Query: 137 DKCGS-TNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDG 195
D CG+ T K+H I+ ++ + +K DKL+H YT IL+PD +LVD
Sbjct: 144 DICGTQTKKLHVIVSYQGQN------YPIKKDLQCETDKLNHFYTFILRPDASYSVLVDN 197
Query: 196 EEKKKANFLSADDFEPSLIPSKTIXXXXXXXXXXXXXRAKIPDPDAVKPDDWDEDAPMEI 255
+E++ + + D ++P + I R I DP+ VKP+ +D P EI
Sbjct: 198 KEREFGSMYTDWD----ILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDS-IPREI 252
Query: 256 EDEEATKPEGWLXXXXXXXXXXXANKPXXXXXXXXXXXXAPKIDNPKCEEAPGCGEWKRP 315
D +A +PE W PKI N + G WK
Sbjct: 253 PDRKAKEPEDW-------------------DEEENGLWEPPKIPNSAYK-----GPWKAK 288
Query: 316 MKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDPIAAIGIEIWTMQDGI 375
+NP YKGKW P IDNP ++ +P+ + L I GIE+W ++ G
Sbjct: 289 RIKNPNYKGKWKNPWIDNPEFED--------DPDLYVLKS-----IKYAGIEVWQVKAGS 335
Query: 376 LFDNILIADDEKVATSILE 394
+FDNILI DD A SI++
Sbjct: 336 IFDNILICDDPAYARSIVD 354
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,717,268
Number of extensions: 465383
Number of successful extensions: 827
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 5
Length of query: 537
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 434
Effective length of database: 8,282,721
Effective search space: 3594700914
Effective search space used: 3594700914
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)