BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0390000 Os04g0390000|AK098921
         (1001 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65750.1  | chr5:26304212-26307947 FORWARD LENGTH=1026        1740   0.0  
AT3G55410.1  | chr3:20541897-20545728 FORWARD LENGTH=1018        1730   0.0  

>AT5G65750.1 | chr5:26304212-26307947 FORWARD LENGTH=1026
          Length = 1025

 Score = 1740 bits (4506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 814/984 (82%), Positives = 895/984 (90%), Gaps = 4/984 (0%)

Query: 18   RYFHSTXXXXXXXXXXXX---XXLSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDN 74
            R FHST                 LS+LTDSFLDGTSSVYLEELQRAWEADP SVDESWDN
Sbjct: 39   RCFHSTILKSKAESAAPVPRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDN 98

Query: 75   FFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVSGHLKAKLDPLALEERPIPDVLDPA 134
            FFRNFVGQA+TSPGISGQTIQESMRLLLLVRAYQV+GH+KAKLDPL LE+R IP+ L P 
Sbjct: 99   FFRNFVGQASTSPGISGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEKREIPEDLTPG 158

Query: 135  FYGFSEADLDREFFLGVWRMAGFLSENRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREK 194
             YGF+EADLDREFFLGVWRM+GFLSENRPVQTLRS+L RLEQAYCGTIGYEYMHI DR+K
Sbjct: 159  LYGFTEADLDREFFLGVWRMSGFLSENRPVQTLRSILSRLEQAYCGTIGYEYMHIADRDK 218

Query: 195  CNWLRDRIETVNAREYSYDRRQVMLDRLMWSTQFESFLAQKWTTAKRFGLEGAETLIPGM 254
            CNWLRD+IET   R+Y+ +RR V+ DRL WSTQFE+FLA KWTTAKRFGLEGAE+LIPGM
Sbjct: 219  CNWLRDKIETPTPRQYNSERRMVIYDRLTWSTQFENFLATKWTTAKRFGLEGAESLIPGM 278

Query: 255  KEMFDRAADLGVESIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPAEEGEGLYTGT 314
            KEMFDR+ADLGVE+IVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGT+P +E  GLYTGT
Sbjct: 279  KEMFDRSADLGVENIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTRPVDE-VGLYTGT 337

Query: 315  GDVKYHLGTSYDRPTRGGKHIHLSLVANPSHLEAVDPVVAGKTRAKQYYSNDLDRTKNLG 374
            GDVKYHLGTSYDRPTRGGKH+HLSLVANPSHLEAVDPVV GKTRAKQYY+ D +RTKN+G
Sbjct: 338  GDVKYHLGTSYDRPTRGGKHLHLSLVANPSHLEAVDPVVIGKTRAKQYYTKDENRTKNMG 397

Query: 375  VLLHGDGSFSGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVA 434
            +L+HGDGSF+GQGVVYETLHLSALPNY TGGT+HIVVNNQVAFTTDPR GRSSQYCTDVA
Sbjct: 398  ILIHGDGSFAGQGVVYETLHLSALPNYCTGGTVHIVVNNQVAFTTDPREGRSSQYCTDVA 457

Query: 435  KALDAPIFHVNGDDLEAVVHVCELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPK 494
            KAL APIFHVN DD+EAVVH CELAAEWRQTFHSDVVVD+VCYRRFGHNEIDEPSFTQPK
Sbjct: 458  KALSAPIFHVNADDIEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPK 517

Query: 495  MYKIIRNHQSALEIYQNRLLESGKISKEDIDKMQKKVSTILNDEFQNSKEYIPNKRDWLS 554
            MYK+IR+H S+L+IYQ +LL+SG++++EDIDK+QKKVS+ILN+E++ SK+YIP KRDWL+
Sbjct: 518  MYKVIRSHPSSLQIYQEKLLQSGQVTQEDIDKIQKKVSSILNEEYEASKDYIPQKRDWLA 577

Query: 555  AYWTGFKSPEQISRIRNTGVKPEILKRVGEAMTTLPENFKPHRAVKKIFELRRQMIETGE 614
            ++WTGFKSPEQISRIRNTGVKPEILK VG+A++T PENFKPHR VK+++E R QMIE+GE
Sbjct: 578  SHWTGFKSPEQISRIRNTGVKPEILKNVGKAISTFPENFKPHRGVKRVYEQRAQMIESGE 637

Query: 615  GIDWAVGEALAFATLIIEGNHVRLSGQDVERGTFSHRHAVIHDQETGEQYCPLDNLVMNQ 674
            GIDW +GEALAFATL++EGNHVRLSGQDVERGTFSHRH+V+HDQETGE+YCPLD+L+ NQ
Sbjct: 638  GIDWGLGEALAFATLVVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIKNQ 697

Query: 675  DEELFTVSNSSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAK 734
            D E+FTVSNSSLSEF VLGFELGYSMENPNSLV+WEAQFGDF+NGAQV+FDQF+SSGEAK
Sbjct: 698  DPEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVMFDQFISSGEAK 757

Query: 735  WLRQTGLVVCLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVV 794
            WLRQTGLVV LPHGYDGQGPEHSS RLERFLQMSDDNPYVIPEMDPTLRKQIQ+CNWQVV
Sbjct: 758  WLRQTGLVVLLPHGYDGQGPEHSSGRLERFLQMSDDNPYVIPEMDPTLRKQIQECNWQVV 817

Query: 795  NVTTPANYFHVLRRQIHRDFRKPLIVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTR 854
            NVTTPANYFHVLRRQIHRDFRKPLIVM+PKNLLRHK C SNLSEFDD+ GHPGFDKQGTR
Sbjct: 818  NVTTPANYFHVLRRQIHRDFRKPLIVMAPKNLLRHKQCVSNLSEFDDVKGHPGFDKQGTR 877

Query: 855  FKRLIKDQNNHKDLEEGIKRLVLCSGKVYYELXXXXXXXXXXXVAICRVEQLCPFPYDLI 914
            FKRLIKDQ+ H DLEEGI+RLVLCSGKVYYEL           VAICRVEQLCPFPYDLI
Sbjct: 878  FKRLIKDQSGHSDLEEGIRRLVLCSGKVYYELDEERKKSETKDVAICRVEQLCPFPYDLI 937

Query: 915  QRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMRALGRGTIDDIKYVGRAPSAATAT 974
            QRELKRYPNAEIVWCQEEPMNMG Y YI  RL TAM+AL RG  +DIKYVGR PSAATAT
Sbjct: 938  QRELKRYPNAEIVWCQEEPMNMGGYQYIALRLCTAMKALQRGNFNDIKYVGRLPSAATAT 997

Query: 975  GFYSVHVQEQTELVQKALQRDPIN 998
            GFY +HV+EQT+LV+KALQ DPI 
Sbjct: 998  GFYQLHVKEQTDLVKKALQPDPIT 1021



>AT3G55410.1 | chr3:20541897-20545728 FORWARD LENGTH=1018
          Length = 1017

 Score = 1730 bits (4480), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 804/961 (83%), Positives = 889/961 (92%), Gaps = 2/961 (0%)

Query: 38   LSRLTDSFLDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQES 97
            LS+LTDSFLDGTSSVYLEELQRAWEADP SVDESWDNFFRNFVGQAATSPGISGQTIQES
Sbjct: 59   LSKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQES 118

Query: 98   MRLLLLVRAYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGF 157
            MRLLLLVRAYQV+GH+KAKLDPL LE+R IP+ LD A YGF+EADLDREFFLGVW+M+GF
Sbjct: 119  MRLLLLVRAYQVNGHMKAKLDPLGLEQREIPEDLDLALYGFTEADLDREFFLGVWQMSGF 178

Query: 158  LSENRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQV 217
            +SENRPVQTLRS+L RLEQAYCG IG+EYMHI DR+KCNWLR++IET     Y+ +RR+V
Sbjct: 179  MSENRPVQTLRSILTRLEQAYCGNIGFEYMHIADRDKCNWLREKIETPTPWRYNRERREV 238

Query: 218  MLDRLMWSTQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRG 277
            +LDRL WSTQFE+FLA KWTTAKRFGLEG E+LIPGMKEMFDRAADLGVESIVIGM HRG
Sbjct: 239  ILDRLAWSTQFENFLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVESIVIGMSHRG 298

Query: 278  RLNVLGNVVRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHL 337
            RLNVLGNVVRKPLRQIFSEFSGG +P +E    YTGTGDVKYHLGTSYDRPTRGGK IHL
Sbjct: 299  RLNVLGNVVRKPLRQIFSEFSGGIRPVDEVG--YTGTGDVKYHLGTSYDRPTRGGKKIHL 356

Query: 338  SLVANPSHLEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSA 397
            SLVANPSHLEA D VV GKTRAKQYYSNDLDRTKNLG+L+HGDGSF+GQGVVYETLHLSA
Sbjct: 357  SLVANPSHLEAADSVVVGKTRAKQYYSNDLDRTKNLGILIHGDGSFAGQGVVYETLHLSA 416

Query: 398  LPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCE 457
            LPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKAL APIFHVNGDD+EAVVH CE
Sbjct: 417  LPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACE 476

Query: 458  LAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESG 517
            LAAEWRQTFHSDVVVD+VCYRRFGHNEIDEPSFTQPKMYK+I+NH S L+IY  +LLE G
Sbjct: 477  LAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIKNHPSTLQIYHKKLLECG 536

Query: 518  KISKEDIDKMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQISRIRNTGVKPE 577
            ++S++DID++Q+KV+TILN+EF  SK+Y+P KRDWLS  W GFKSPEQISR+RNTGVKPE
Sbjct: 537  EVSQQDIDRIQEKVNTILNEEFVASKDYLPKKRDWLSTNWAGFKSPEQISRVRNTGVKPE 596

Query: 578  ILKRVGEAMTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEALAFATLIIEGNHVR 637
            ILK VG+A+++LPENFKPHRAVKK++E R QMIE+GEG+DWA+ EALAFATL++EGNHVR
Sbjct: 597  ILKTVGKAISSLPENFKPHRAVKKVYEQRAQMIESGEGVDWALAEALAFATLVVEGNHVR 656

Query: 638  LSGQDVERGTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELG 697
            LSGQDVERGTFSHRH+V+HDQETGE+YCPLD+L+MNQD E+FTVSNSSLSEF VLGFELG
Sbjct: 657  LSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIMNQDPEMFTVSNSSLSEFGVLGFELG 716

Query: 698  YSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTGLVVCLPHGYDGQGPEHS 757
            YSME+PNSLVLWEAQFGDF+NGAQVIFDQF+SSGEAKWLRQTGLV+ LPHGYDGQGPEHS
Sbjct: 717  YSMESPNSLVLWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVMLLPHGYDGQGPEHS 776

Query: 758  SARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKP 817
            SARLER+LQMSDDNPYVIP+M+PT+RKQIQ+CNWQ+VN TTPANYFHVLRRQIHRDFRKP
Sbjct: 777  SARLERYLQMSDDNPYVIPDMEPTMRKQIQECNWQIVNATTPANYFHVLRRQIHRDFRKP 836

Query: 818  LIVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGIKRLVL 877
            LIVM+PKNLLRHKDCKSNLSEFDD+ GHPGFDKQGTRFKRLIKDQN+H DLEEGI+RLVL
Sbjct: 837  LIVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVL 896

Query: 878  CSGKVYYELXXXXXXXXXXXVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMG 937
            CSGKVYYEL           VAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEE MNMG
Sbjct: 897  CSGKVYYELDDERKKVGATDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEAMNMG 956

Query: 938  AYSYINPRLLTAMRALGRGTIDDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPI 997
            A+SYI+PRL TAMR++ RG ++DIKYVGR PSAATATGFY+ HV+EQ  LVQKA+ ++PI
Sbjct: 957  AFSYISPRLWTAMRSVNRGDMEDIKYVGRGPSAATATGFYTFHVKEQAGLVQKAIGKEPI 1016

Query: 998  N 998
            N
Sbjct: 1017 N 1017



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,600,935
Number of extensions: 997611
Number of successful extensions: 2029
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2026
Number of HSP's successfully gapped: 2
Length of query: 1001
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 893
Effective length of database: 8,145,641
Effective search space: 7274057413
Effective search space used: 7274057413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)