BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0367400 Os04g0367400|AK061121
(213 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204 110 6e-25
AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202 87 8e-18
AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272 79 2e-15
AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256 77 6e-15
AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258 77 7e-15
AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219 73 1e-13
AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276 72 3e-13
AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250 69 2e-12
AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272 69 2e-12
AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243 67 1e-11
AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226 66 2e-11
AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268 60 1e-09
AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207 51 5e-07
>AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204
Length = 203
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 7/174 (4%)
Query: 21 GEFVGDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAAR 80
G V DV++WR+ +VS ++ T++ W++F + Y W+K+A
Sbjct: 21 GGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSAS 80
Query: 81 LLNRPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXX 140
+LNRP PP+PE +IS+ + E + L +N + V HDIA+ +DS L+ +V
Sbjct: 81 ILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLS 140
Query: 141 XXXXXTDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFA-------YLNLQMY 187
DF TLC+TS++ V+T+PA Y++YE+ I + F YL L+++
Sbjct: 141 LIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELYLRLEIW 194
>AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202
Length = 201
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
Query: 24 VGDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLN 83
V D++MW+ LL +T W LF GY WAK+A L N
Sbjct: 14 VADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFN 73
Query: 84 RPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXX 143
RP P +P + I+++ V VA + +NTV +V +I +G+++ ++V
Sbjct: 74 RPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVG 133
Query: 144 XXTDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNLQ-MYEMVYERFSAKCFHRA 202
+F T+ Y +V L IP LY++Y++ ID + + +Q Y + ER K +
Sbjct: 134 NFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKIIAKP 193
Query: 203 RD 204
+
Sbjct: 194 TN 195
>AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272
Length = 271
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%)
Query: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNR 84
D+ +WR VS +L A W+LF Y W+ A+ +++
Sbjct: 81 ADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHK 140
Query: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXX 144
IPE+ I + VV ++A+ L +N F+V DIA G+D F V
Sbjct: 141 SPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGS 200
Query: 145 XTDFTTLCYTSIVAVLTIPALYQKYEECIDRY 176
+F TL Y + V + TIP LY+KYE+ +D +
Sbjct: 201 SCNFLTLIYIATVLLFTIPVLYEKYEDKVDDF 232
>AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256
Length = 255
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%)
Query: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNR 84
DV +WR +S +L + W+LF Y W+ A L+N+
Sbjct: 69 ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINK 128
Query: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXX 144
P IPE+ + ++ VA+ L + +N F + IALG+D F V
Sbjct: 129 TSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGN 188
Query: 145 XTDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNLQMYEMVYER 193
+F TL Y V + T+P LY+K+E+ +D A LQ +V++
Sbjct: 189 WFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 237
>AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258
Length = 257
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNR 84
D+ +WR VS +L A + W+LF Y W+ A +++
Sbjct: 69 ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHK 128
Query: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXX 144
P IPE+ I + + ++ + L +N ++ +IA GKD F V
Sbjct: 129 STPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGS 188
Query: 145 XTDFTTLCYTSIVAVLTIPALYQKYEECIDRY----MR-----FAYLNLQMYEMVYERFS 195
+F TL YT+ V + TIP LY+KYE+ +D Y MR +A L+ ++ V +
Sbjct: 189 CYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIP 248
Query: 196 AKCFHRARD 204
++ +D
Sbjct: 249 RGALNKKKD 257
>AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219
Length = 218
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 24 VGDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLN 83
V D+++WR + LL ++ W LF GY WAK+A +LN
Sbjct: 6 VADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLN 65
Query: 84 RPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVF 133
RP PP+P M I ++ N+ A L +N V S+ DI + ++ + QVF
Sbjct: 66 RPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVF 115
>AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276
Length = 275
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 26 DVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNRP 85
D+ MW+ +S +L + W++F Y W+ A +N+
Sbjct: 91 DIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKS 150
Query: 86 EPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXXX 145
P IPE+ I ++ + ++A+ L +N FS +IA G+D F
Sbjct: 151 PPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGC 210
Query: 146 TDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNL-QMYEMVYERFSAKC 198
+F TL Y ++V + T+P Y KYE+ +D A + L + Y ++ E+ +K
Sbjct: 211 FNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKI 264
>AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250
Length = 249
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNR 84
D+++WRR +S ++ + WL+F G A+ + NR
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFY-QVFXXXXXXXXXX 143
+PE+ +S+++VN AA +N + + HD+ +G D LF+ QV
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 144 XXTDFTTLCYTSIVAVLTIPALYQKYEECIDR 175
TL Y + +TIPALY KY+ +D+
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDK 215
>AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272
Length = 271
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 3/176 (1%)
Query: 26 DVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNRP 85
D+ MW+ +S + W+LF Y W+ A +++
Sbjct: 87 DIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKS 146
Query: 86 EPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXXX 145
P IPE+ I ++ + ++A+ L +N S +IA G+D F
Sbjct: 147 PPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGC 206
Query: 146 TDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNLQMYEMVYERFSAKCFHR 201
F TL Y ++V + T+P Y KYE+ +D Y A L+ Y AK F +
Sbjct: 207 YSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQ---YAVLDAKVFSK 259
>AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243
Length = 242
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNR 84
DV++WR V+ LL+A WLLFG GG W+ A LN+
Sbjct: 69 ADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNK 125
Query: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXX 144
+ ++ I ++ + + A+ + +N F+ IAL +D F
Sbjct: 126 SPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGN 185
Query: 145 XTDFTTLCYTSIVAVLTIPALYQKYEECIDRYMRFAYLNLQMYEMVYE-RFSAKCFH 200
F +L Y V + T+P LY+KYE+ ID A + ++ + V+E +F +K H
Sbjct: 186 WFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIPH 242
>AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226
Length = 225
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 21 GEFVGDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAAR 80
G V D+++WR ++A L+ W L Y W+ A+
Sbjct: 36 GGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASD 95
Query: 81 LLNRPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXX 140
LN P IPE+ + + ++A H N + + D+A G+D LF+
Sbjct: 96 FLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVS 155
Query: 141 XXXXXTDFTTLCYTSIVAVLTIPALYQKYEECID 174
+F L + V++ T+P +Y+ YE+ +D
Sbjct: 156 IIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVD 189
>AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268
Length = 267
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 60/152 (39%)
Query: 26 DVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARLLNRP 85
DV++WR +SA +L + W+LF + W+ A+ LNR
Sbjct: 83 DVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRS 142
Query: 86 EPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXXXXXX 145
+ +P + + + EV + +N D+A + F
Sbjct: 143 QSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSC 202
Query: 146 TDFTTLCYTSIVAVLTIPALYQKYEECIDRYM 177
+F T+ Y V T+P LY++YE+ +D +M
Sbjct: 203 CNFLTVLYIGFVGAHTMPVLYERYEDEVDGFM 234
>AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207
Length = 206
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 61/156 (39%)
Query: 22 EFVGDVVMWRRGDVSACLLAATVSGWLLFGSGGYXXXXXXXXXXXXXXXXXXXWAKAARL 81
+ V D+ +WRR ++ L + S W+L G+ W RL
Sbjct: 14 DIVEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRL 73
Query: 82 LNRPEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFXXXXXXXX 141
L++ EP + + +S++ V E M + + + +F +
Sbjct: 74 LSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSR 133
Query: 142 XXXXTDFTTLCYTSIVAVLTIPALYQKYEECIDRYM 177
DF T + +V LT+P L+++Y + I +++
Sbjct: 134 IGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHL 169
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.140 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,608,815
Number of extensions: 110080
Number of successful extensions: 312
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 289
Number of HSP's successfully gapped: 13
Length of query: 213
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 119
Effective length of database: 8,529,465
Effective search space: 1015006335
Effective search space used: 1015006335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 109 (46.6 bits)