BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0346000 Os04g0346000|AK064621
(267 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284 402 e-112
AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288 232 2e-61
AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291 226 7e-60
AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290 222 2e-58
AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292 216 1e-56
AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289 198 2e-51
AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300 192 1e-49
AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299 190 6e-49
AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325 178 3e-45
AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273 159 1e-39
AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289 158 4e-39
AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275 132 1e-31
AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292 96 2e-20
>AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284
Length = 283
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/268 (69%), Positives = 222/268 (82%), Gaps = 19/268 (7%)
Query: 16 TFVTLGMILGSLLQLAFFRRIDDH-------------------SNVTHLENDQEAAFLRL 56
TFVT+GM++GSLLQLAF R++D +V+ ND++A LR+
Sbjct: 13 TFVTVGMVIGSLLQLAFINRLEDSYGTGFPSLRGLRGQNTRYLRDVSRWANDKDAELLRI 72
Query: 57 GLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSG 116
G VKPEV+SWSPRIIV H+FLS EEC+YL++IARPRLQ+STVVDV TGKGVKS+VRTSSG
Sbjct: 73 GNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVRTSSG 132
Query: 117 MFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKR 176
MF++ ER P+IQ+IEKRI+V+SQ+P ENGELIQVLRYEP Q+Y+PHHDYF+DTFN+KR
Sbjct: 133 MFLTHVERSYPIIQAIEKRIAVFSQVPAENGELIQVLRYEPQQFYKPHHDYFADTFNLKR 192
Query: 177 GGQRVATMLMYLTDGVEGGETHFPQAGDGECSCGGKMVKGLCVKPNKGDAVLFWSMGLDG 236
GGQRVATMLMYLTD VEGGET+FP AGDG+C+CGGK++KG+ VKP KGDAVLFWSMGLDG
Sbjct: 193 GGQRVATMLMYLTDDVEGGETYFPLAGDGDCTCGGKIMKGISVKPTKGDAVLFWSMGLDG 252
Query: 237 ETDSNSIHGGCPVLEGEKWSATKWMRQK 264
++D SIHGGC VL GEKWSATKWMRQK
Sbjct: 253 QSDPRSIHGGCEVLSGEKWSATKWMRQK 280
>AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288
Length = 287
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 155/249 (62%), Gaps = 21/249 (8%)
Query: 26 SLLQLAFFRRIDDHSNVTHLENDQEAAFLRLGLVKPEVISWSPRIIVFHNFLSSEECDYL 85
S + L++FRR ++ + G EV+SW PR V+HNFLS EEC+YL
Sbjct: 50 SPIDLSYFRRA---------ATERSEGLGKRGDQWTEVLSWEPRAFVYHNFLSKEECEYL 100
Query: 86 RSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSSEERKLPVIQSIEKRISVYSQIPEE 145
S+A+P + STVVD TGK S VRTSSG F+ K +I++IEKRI+ Y+ IP +
Sbjct: 101 ISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDK--IIKTIEKRIADYTFIPAD 158
Query: 146 NGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRVATMLMYLTDGVEGGETHFPQAG-- 203
+GE +QVL YE Q Y PH+DYF D FN K GGQR+ATMLMYL+D EGGET FP A
Sbjct: 159 HGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMYLSDVEEGGETVFPAANMN 218
Query: 204 ------DGECSCGGKMVKGLCVKPNKGDAVLFWSMGLDGETDSNSIHGGCPVLEGEKWSA 257
E S GK KGL VKP GDA+LFWSM D D S+HGGCPV+ G KWS+
Sbjct: 219 FSSVPWYNELSECGK--KGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCPVIRGNKWSS 276
Query: 258 TKWMRQKEF 266
TKWM E+
Sbjct: 277 TKWMHVGEY 285
>AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291
Length = 290
Score = 226 bits (577), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 145/214 (67%), Gaps = 14/214 (6%)
Query: 62 EVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSS 121
EVISW PR V+HNFL++EEC++L S+A+P + S VVDV TGK + S VRTSSG F++
Sbjct: 81 EVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLNR 140
Query: 122 EERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRV 181
+ +++ IE RIS ++ IP ENGE +QVL YE Q Y PHHDYF D FN+++GGQR+
Sbjct: 141 GHDE--IVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDYFFDEFNVRKGGQRI 198
Query: 182 ATMLMYLTDGVEGGETHFPQAG---------DGECSCGGKMVKGLCVKPNKGDAVLFWSM 232
AT+LMYL+D EGGET FP A D CG +GL V P K DA+LFWSM
Sbjct: 199 ATVLMYLSDVDEGGETVFPAAKGNVSDVPWWDELSQCGK---EGLSVLPKKRDALLFWSM 255
Query: 233 GLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
D D +S+HGGCPV++G KWS+TKW E+
Sbjct: 256 KPDASLDPSSLHGGCPVIKGNKWSSTKWFHVHEY 289
>AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290
Length = 289
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 141/216 (65%), Gaps = 18/216 (8%)
Query: 62 EVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSS 121
E+ISW PR V+HNFL+ EEC YL +A+P ++ STVVD TGK S VRTSSG F++
Sbjct: 79 EIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
Query: 122 EERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRV 181
K I+ IEKRIS ++ IP E+GE +QVL YE Q Y PH+DYF D +N + GGQR+
Sbjct: 139 GRDK--TIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRI 196
Query: 182 ATMLMYLTDGVEGGETHFPQAGDG-----------ECSCGGKMVKGLCVKPNKGDAVLFW 230
AT+LMYL+D EGGET FP A EC G GL VKP GDA+LFW
Sbjct: 197 ATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKG-----GLSVKPKMGDALLFW 251
Query: 231 SMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
SM D D +S+HGGC V++G KWS+TKW+R E+
Sbjct: 252 SMTPDATLDPSSLHGGCAVIKGNKWSSTKWLRVHEY 287
>AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292
Length = 291
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 145/213 (68%), Gaps = 12/213 (5%)
Query: 62 EVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFVSS 121
EVISW PR +V+HNFL++EEC++L S+A+P + STVVD TG S VRTSSG F+
Sbjct: 81 EVISWEPRAVVYHNFLTNEECEHLISLAKPSMVKSTVVDEKTGGSKDSRVRTSSGTFLRR 140
Query: 122 EERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRV 181
+ V++ IEKRIS ++ IP ENGE +QVL Y+ Q Y PH+DYF D FN K GGQR+
Sbjct: 141 GHDE--VVEVIEKRISDFTFIPVENGEGLQVLHYQVGQKYEPHYDYFLDEFNTKNGGQRI 198
Query: 182 ATMLMYLTDGVEGGETHFPQA-GD-------GECSCGGKMVKGLCVKPNKGDAVLFWSMG 233
AT+LMYL+D +GGET FP A G+ E S GK +GL V P K DA+LFW+M
Sbjct: 199 ATVLMYLSDVDDGGETVFPAARGNISAVPWWNELSKCGK--EGLSVLPKKRDALLFWNMR 256
Query: 234 LDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
D D +S+HGGCPV++G KWS+TKW EF
Sbjct: 257 PDASLDPSSLHGGCPVVKGNKWSSTKWFHVHEF 289
>AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289
Length = 288
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 12/211 (5%)
Query: 64 ISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVV-DVATGKGVKSNVRTSSGMFVSSE 122
+SW+PR ++ FLS EECD+L +A+ +L+ S VV DV +G+ S VRTSSGMF++
Sbjct: 35 LSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESEDSEVRTSSGMFLT-- 92
Query: 123 ERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRVA 182
+R+ ++ ++E +++ ++ +PEENGE +Q+L YE Q Y PH DYF D ++ GG R+A
Sbjct: 93 KRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGHRIA 152
Query: 183 TMLMYLTDGVEGGETHF-------PQAGDGECSCGGKMVKGLCVKPNKGDAVLFWSMGLD 235
T+LMYL++ +GGET F PQ D S K +G VKP KGDA+LF+++ L+
Sbjct: 153 TVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAK--QGYAVKPRKGDALLFFNLHLN 210
Query: 236 GETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
G TD NS+HG CPV+EGEKWSAT+W+ + F
Sbjct: 211 GTTDPNSLHGSCPVIEGEKWSATRWIHVRSF 241
>AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300
Length = 299
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 136/218 (62%), Gaps = 16/218 (7%)
Query: 60 KPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFV 119
K + +S PR V+ FL+ ECD+L S+A+ LQ S V D G+ S+VRTSSG F+
Sbjct: 37 KVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFI 96
Query: 120 SSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQ 179
S + K P++ IE ++S ++ +P+ENGE +QVLRYE Q Y H DYF D NI RGG
Sbjct: 97 S--KGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGH 154
Query: 180 RVATMLMYLTDGVEGGETHFPQA-----------GDGECSCGGKMVKGLCVKPNKGDAVL 228
R+AT+L+YL++ +GGET FP A D C KG+ VKP KG+A+L
Sbjct: 155 RIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAK---KGIAVKPKKGNALL 211
Query: 229 FWSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
F+++ D D S+HGGCPV+EGEKWSATKW+ F
Sbjct: 212 FFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSF 249
>AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299
Length = 298
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 60 KPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRTSSGMFV 119
K + +S PR V+ FL+ ECD++ S+A+ L+ S V D +G+ S VRTSSG F+
Sbjct: 36 KVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVRTSSGTFI 95
Query: 120 SSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQ 179
S + K P++ IE +IS ++ +P+ENGE IQVLRYE Q Y H DYF D NI RGG
Sbjct: 96 S--KGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGGH 153
Query: 180 RVATMLMYLTDGVEGGETHFPQA--------GDGECSCGGKMVKGLCVKPNKGDAVLFWS 231
R+AT+LMYL++ +GGET FP A + + +G+ VKP KGDA+LF++
Sbjct: 154 RMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFN 213
Query: 232 MGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
+ D D S+HGGCPV+EGEKWSATKW+ F
Sbjct: 214 LHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSF 248
>AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325
Length = 324
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 136/217 (62%), Gaps = 17/217 (7%)
Query: 64 ISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKGVKSN----VRTSSGMFV 119
+SW+PR+ ++ FLS EECD+ +A+ +L+ S V D +G+ V+S V S F+
Sbjct: 59 LSWTPRVFLYEGFLSDEECDHFIKLAKGKLEKSMVADNDSGESVESEDSVSVVRQSSSFI 118
Query: 120 SSEERKL--PVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRG 177
++ + ++ ++E +++ ++ +PEENGE +Q+L YE Q Y PH DYF D N++ G
Sbjct: 119 ANMDSLEIDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFHDQANLELG 178
Query: 178 GQRVATMLMYLTDGVEGGETHFPQ--------AGDGECSCGGKMVKGLCVKPNKGDAVLF 229
G R+AT+LMYL++ +GGET FP D C +G VKP KGDA+LF
Sbjct: 179 GHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAK---QGYAVKPRKGDALLF 235
Query: 230 WSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266
+++ + TDSNS+HG CPV+EGEKWSAT+W+ K F
Sbjct: 236 FNLHPNATTDSNSLHGSCPVVEGEKWSATRWIHVKSF 272
>AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273
Length = 272
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 120/192 (62%), Gaps = 26/192 (13%)
Query: 62 EVISWSPRIIVFHNFL--------SSEECDYLRSIARPRLQISTVVDVATGKGVKSNVRT 113
EVI+ PR V+HNFL ++EECD+L S+A+P + S V + TG G +S+ RT
Sbjct: 89 EVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRT 148
Query: 114 SSGMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFN 173
SSG F+ S K +++ IEKRIS ++ IP+ENGE +QV+ YE Q + PH D
Sbjct: 149 SSGTFIRSGHDK--IVKEIEKRISEFTFIPQENGETLQVINYEVGQKFEPHFD------- 199
Query: 174 IKRGGQRVATMLMYLTDGVEGGETHFPQAGDGECSCGGKMVKGLCVKPNKGDAVLFWSMG 233
G QR+AT+LMYL+D +GGET FP+A G K KG+ V+P KGDA+LFWSM
Sbjct: 200 ---GFQRIATVLMYLSDVDKGGETVFPEAK------GIKSKKGVSVRPKKGDALLFWSMR 250
Query: 234 LDGETDSNSIHG 245
DG D +S HG
Sbjct: 251 PDGSRDPSSKHG 262
>AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289
Length = 288
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 5/214 (2%)
Query: 56 LGLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVV--DVATGKGVKSNVRT 113
+G + +V+SW PR I F NF ++E+C + A+ L+ S + T + K RT
Sbjct: 73 IGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALALRKGETAENTK-GTRT 131
Query: 114 SSGMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFN 173
SSG F+S+ E + +E++I+ + IP +GE +LRYE Q Y H+D F+ T
Sbjct: 132 SSGTFISASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQKYDSHYDVFNPTEY 191
Query: 174 IKRGGQRVATMLMYLTDGVEGGETHFPQAGDGECSCG--GKMVKGLCVKPNKGDAVLFWS 231
+ QR+A+ L+YL+D EGGET FP G K GL VKP KGD +LF+S
Sbjct: 192 GPQSSQRIASFLLYLSDVEEGGETMFPFENGSNMGIGYDYKQCIGLKVKPRKGDGLLFYS 251
Query: 232 MGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKE 265
+ +G D S+HG CPV +GEKW ATKW+R ++
Sbjct: 252 VFPNGTIDQTSLHGSCPVTKGEKWVATKWIRDQD 285
>AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275
Length = 274
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 117/206 (56%), Gaps = 6/206 (2%)
Query: 64 ISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTVVDVATGKG-VKSNVRTSSGMFVSSE 122
+SW+PR+ NF + ++C+ + +A+P+L+ ST+ A KG + + ++
Sbjct: 71 LSWNPRVFYLPNFATKQQCEAVIDMAKPKLKPSTL---ALRKGETAETTQNYRSLHQHTD 127
Query: 123 ERKLPVIQSIEKRISVYSQIPEENGELIQVLRYEPSQYYRPHHDYFSDTFNIKRGGQRVA 182
E + V+ +IE++I++ ++ P++ E +LRY+ Q Y H+D F QRV
Sbjct: 128 EDESGVLAAIEEKIALATRFPKDYYESFNILRYQLGQKYDSHYDAFHSAEYGPLISQRVV 187
Query: 183 TMLMYLTDGVEGGETHFPQAGDGECSCGGKMVK--GLCVKPNKGDAVLFWSMGLDGETDS 240
T L++L+ EGGET FP + K GL VKP +GDA+ F+++ +G D
Sbjct: 188 TFLLFLSSVEEGGETMFPFENGRNMNGRYDYEKCVGLKVKPRQGDAIFFYNLFPNGTIDQ 247
Query: 241 NSIHGGCPVLEGEKWSATKWMRQKEF 266
S+HG CPV++GEKW ATKW+R + +
Sbjct: 248 TSLHGSCPVIKGEKWVATKWIRDQTY 273
>AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292
Length = 291
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%), Gaps = 34/232 (14%)
Query: 42 VTHLENDQEAAFLRLG--LVKPEVI---SWSPRIIVFHNFLSSEECDYLRSIARPRLQIS 96
+T +D +A+++ LG V P + SW PR+ ++ FLS EECD+L S+ + ++
Sbjct: 36 ITSKSDDTQASYV-LGSKFVDPTRVLQLSWLPRVFLYRGFLSEEECDHLISLRKETTEVY 94
Query: 97 TVVDVATGKGVKSNVRTSSGMFVSSEERKLPVIQSIEKRISVYSQIPEENGELIQVLRYE 156
+V A GK + PV+ IE+++S ++ +P ENG I+V Y
Sbjct: 95 SVD--ADGK-----------------TQLDPVVAGIEEKVSAWTFLPGENGGSIKVRSYT 135
Query: 157 PSQYYRPHHDYFSDTFNIKRGGQRVATMLMYLTDGVEGGETHFPQA---GDGECSCGGKM 213
S+ DYF + + +AT+++YL++ +GGE FP + C GG +
Sbjct: 136 -SEKSGKKLDYFGEEPSSVLHESLLATVVLYLSNTTQGGELLFPNSEMKPKNSCLEGGNI 194
Query: 214 VKGLCVKPNKGDAVLFWSMGLDGETDSNSIHGGCPVLEGEKWSATKWMRQKE 265
++ P KG+A+LF++ L+ D S H CPV++GE ATK + K+
Sbjct: 195 LR-----PVKGNAILFFTRLLNASLDGKSTHLRCPVVKGELLVATKLIYAKK 241
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,976,111
Number of extensions: 263375
Number of successful extensions: 567
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 537
Number of HSP's successfully gapped: 13
Length of query: 267
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 170
Effective length of database: 8,447,217
Effective search space: 1436026890
Effective search space used: 1436026890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)