BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0267600 Os04g0267600|AK071614
(407 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G16930.1 | chr1:5789987-5791534 FORWARD LENGTH=450 71 9e-13
AT5G44950.1 | chr5:18151665-18153164 FORWARD LENGTH=439 65 7e-11
AT1G58310.1 | chr1:21631947-21633642 FORWARD LENGTH=506 63 4e-10
AT4G00315.1 | chr4:137404-138888 FORWARD LENGTH=442 62 4e-10
AT5G38390.1 | chr5:15366432-15368053 FORWARD LENGTH=457 62 4e-10
AT1G51370.1 | chr1:19045615-19047141 FORWARD LENGTH=436 59 3e-09
AT1G55030.1 | chr1:20530417-20531768 REVERSE LENGTH=423 54 1e-07
AT3G49150.1 | chr3:18218858-18221877 FORWARD LENGTH=631 53 3e-07
AT5G38386.1 | chr5:15363178-15364815 FORWARD LENGTH=404 53 3e-07
AT5G56380.1 | chr5:22838836-22840353 REVERSE LENGTH=440 52 4e-07
AT1G32375.1 | chr1:11679230-11680679 FORWARD LENGTH=423 52 7e-07
AT3G59150.1 | chr3:21872729-21874422 FORWARD LENGTH=510 50 2e-06
>AT1G16930.1 | chr1:5789987-5791534 FORWARD LENGTH=450
Length = 449
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 158/377 (41%), Gaps = 52/377 (13%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGNVSGQ 78
DR+S+LPD+ L ++L L + + TS LS+RWRN+ VPV+DL
Sbjct: 15 DRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDL-------------DS 61
Query: 79 KTCFDHQVTAAILGKDLPTRKFR-LDAFYPPYDLRDQWFAIVSVSGLEEFDVKLRYWDHS 137
D V + + + L + + L+ F Y++ + + + + W ++
Sbjct: 62 NNFPDDDVFVSFVNRFLGSENEQHLERFKLIYEVNEHDAS------------RFKSWINA 109
Query: 138 --RRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDVPAGGVSMP 195
+R +C F H + D D+E+ P ++ C+ LD P VS+P
Sbjct: 110 VIKRRVCHFNVHNE--VDDDDEL----VKMPLSLYSCERLVNLQLYRVALDHPE-SVSLP 162
Query: 196 SLETLFLKRIMAE-DGAVQRLISGCPNIADLTLEQCP--SVKRLVVASPRLDSFAMICCH 252
++ + L + + D ++ LISGCP + +LT+ + P S++ + V S L SF +
Sbjct: 163 CVKIMHLDMVKYDADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSER 222
Query: 253 HAS--HVV-LQAERLRTLRYKGGLPGENFFSIANCGDVLAMTIDIC------ESLLGKSA 303
+ S HVV + A RL + + F I N G + ID+ + L +
Sbjct: 223 YESQNHVVTIDAPRLEYMNLCDH--RSDSFIIHNIGPFAKVDIDVIFNVEYNDPLEPDDS 280
Query: 304 SAVVPITKVITRCTNVTFLHLHLRPTMAFHSGTFTRALRHLPHLRQLALKGLLDNDETAL 363
S + + K +T + V+ + + H + LP L+ D
Sbjct: 281 SKIAMLGKFLTGLSTVSEMVISSDTLQVIHDYC---KMEQLPQFSNLSRLHAYFEDTWWE 337
Query: 364 SVSTLLRNTPNLDVLSL 380
+ T L + PNL L +
Sbjct: 338 MLPTFLESFPNLHSLVM 354
>AT5G44950.1 | chr5:18151665-18153164 FORWARD LENGTH=439
Length = 438
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 43/218 (19%)
Query: 18 RDRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGNVSG 77
RDR+S+LPD L +L +L + TS LS RWR + VP +D V+
Sbjct: 3 RDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLD------------VNV 50
Query: 78 QKTCFDHQVTAAILGKDLPTRKFRLDAFYPPYD-----LRDQ---WFAIVSVSGLEEFDV 129
D + +++ K L + RL F Y+ L D+ W A V G++ DV
Sbjct: 51 HDFPADGNLFESLMDKFLEVNRGRLQNFKLNYESNLYYLMDRFVPWIATVVDRGIQHLDV 110
Query: 130 KLRYWDHSRRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDVPA 189
CP T DF P +I + N LD P
Sbjct: 111 T--------ATDCPPWT-----IDF----------MPANICKSKTLVSLKLVNVGLDTPK 147
Query: 190 GGVSMPSLETLFLKRIMAEDGAVQRLISGCPNIADLTL 227
VS+P L+ + L+ I + LISGCP + DLT+
Sbjct: 148 FVVSLPCLKIMHLEDIFYSPLIAENLISGCPVLEDLTI 185
>AT1G58310.1 | chr1:21631947-21633642 FORWARD LENGTH=506
Length = 505
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 154/403 (38%), Gaps = 65/403 (16%)
Query: 12 MTIMQRRDRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDP---KK 68
M + RD +S LPD+ L +L L + A TS L+++WR + A+VP +D D +
Sbjct: 1 MDFGRSRDIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRL 60
Query: 69 GERWGNVSGQKTCFDHQVTAAILGKDLPTRKFRLDAFYPPYDLRDQWFAIVSVSGLEEFD 128
G+R VSG+ K + R +L + D DQ + S L +F
Sbjct: 61 GKRNPAVSGEDYL-----------KMINERSDQLSTSF--MDFVDQVLRLQDNSPLHKFS 107
Query: 129 VKLRYWDHSRRNLC-PFGTHPKASADFDEEMRHSFTAT-PPHIFRCDXXXXXXXXNWTLD 186
+K+R R +C + +D + +M + ++ P IF + L
Sbjct: 108 LKIRDCVDIVRIICWILKVLERGVSDLELDMHLKWKSSLPSKIFLSETLVRL-----KLS 162
Query: 187 VPAG------GVSMPSLETLFLKRIMAEDGAV--QRLISGCPNIADLTLE---------- 228
V G V +P L+TL + + E + +L+SGC + +L LE
Sbjct: 163 VERGPFIDVEDVHLPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFV 222
Query: 229 --QCPSVKRLVVASPRLDSFAMICCHHASHVVLQAERLRTLRYKGGLPGE----NFFSIA 282
++KRL + + V L L + + E NF S+
Sbjct: 223 SVSLTTLKRLTFCGEVMQD------ENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLV 276
Query: 283 NCGDVLAMTIDICE------SLLGKSASAVVPITKVITRCTNVTFLHLHLRPTMAFHSGT 336
L M+ D E S V T++I NV L+L + +
Sbjct: 277 EAHINLQMSEDQVEQTRFSDSEGNMEGCMVANATELIMGICNVKILYLSV-----YTLEV 331
Query: 337 FTRALRHLPHLRQLALKGLLDNDETAL-SVSTLLRNTPNLDVL 378
T +P L + N E SVS LL+N+PNL+ L
Sbjct: 332 LTYCCEAIPLFNNLTHLTIESNSEVGWESVSGLLKNSPNLETL 374
>AT4G00315.1 | chr4:137404-138888 FORWARD LENGTH=442
Length = 441
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 46/264 (17%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGNVSGQ 78
D+ S LPD L +VL L + +A TS LS RW+++ +P ++ + GQ
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEY----DFRHYSVSEGQ 57
Query: 79 KTCFDHQVTAAILGKDLP-----TRKFRLDAF--YPPYDLRDQWFAI-VSVSGLEEFDVK 130
+T ++LG P + K R A P D+ W ++ V S + E +K
Sbjct: 58 G--LARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIY-LWVSLAVHDSNVRELSLK 114
Query: 131 LRYWDHSRRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTL-DVPA 189
LC F P T P +++C + L DVP
Sbjct: 115 ----------LCTFAERP--------------TKLPKSLYKCKSIVILKLKDEILVDVPR 150
Query: 190 GGVSMPSLETLFLKRI-MAEDGAVQRLISGCPNIADLTLE--QCPSVKRL--VVASPRLD 244
V +PSL+TLFL R+ +++ ++ RL+S CP + DL +E + ++ +L VV S +
Sbjct: 151 -KVCLPSLKTLFLGRVTYSDEDSLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRL 209
Query: 245 SFAMICCHHASHVVLQAERLRTLR 268
+ M C H +++ L+ L+
Sbjct: 210 TLKMSCPCHLDGIMMNTPSLKYLK 233
>AT5G38390.1 | chr5:15366432-15368053 FORWARD LENGTH=457
Length = 456
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 149/382 (39%), Gaps = 58/382 (15%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGNVSGQ 78
D LS+LP L +L L + A +TS LS+RWRN+ A VP VD+VD E + +
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHDIRELFMD---- 57
Query: 79 KTCFDHQVTAAILGKDLPTRKFRLDAFYPPYDLRDQWFAIVSVSGLEEFDVKLRYWDHSR 138
F +V A L + P KF LD D D W V V G+ E ++ + + D
Sbjct: 58 ---FVDRVLA--LQGNSPINKFSLDCSGVDSDRVDCWIQNVMVRGVSELNLSI-FVDSVF 111
Query: 139 RNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDVPAGGVSMPSLE 198
+ + PK E + +I D G + +P L+
Sbjct: 112 ED--DYNLFPKVF-----ENKKLVKLGLSYISWLD----------------GSIFLPMLK 148
Query: 199 TLFLKRIMAEDGAVQRLISGCPNIADLTLEQCPSVKR----LVVASPRLDSFA---MICC 251
TL L+ ++ + L+ P + +L + +R L+V+S L + ++C
Sbjct: 149 TLVLESVLLSVEKFEILLHALPALEELVMNNIYWKERDVVDLIVSSESLKTLTINFIVCT 208
Query: 252 HHASHVVLQAERLRTLRYKGGL-------PGENFFS-----IANCGDVLAMTIDICESLL 299
H S L L Y G + EN F + GD+ + I LL
Sbjct: 209 HTLS---FDTPILAYLSYSGYVVDDYAEAKMENLFEARISLLVVEGDISRVRALINNDLL 265
Query: 300 GKSASAVVPITKVITRCTNVTFLH-LHLRPTMAFHSGTFTRALRHLPHLRQLALKGLLDN 358
V+ V + + L+L P ++ +L+ L++K +
Sbjct: 266 EDDEYDVLQFENVWKLMNGIRNIRCLYLSPNTLEVLSLCCESMPVFKNLKSLSIKSAENR 325
Query: 359 DETALSVSTLLRNTPNLDVLSL 380
A+ V LLRN P+L+ L L
Sbjct: 326 GWQAMPV--LLRNCPHLETLVL 345
>AT1G51370.1 | chr1:19045615-19047141 FORWARD LENGTH=436
Length = 435
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 144/373 (38%), Gaps = 54/373 (14%)
Query: 14 IMQRRDRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWG 73
+ DR+S LP+ ++ +L+HL + ++ TSALS +WR + +VP +DL DP
Sbjct: 14 VSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDL-DPYASSNTN 72
Query: 74 N-VSGQKTCFDHQVTAAILGKDLPTRKFRLDAFY--PPYDLRDQWFAIVSVSGLEEFDVK 130
VS ++ FD +D RK RLD Y YDL W + ++ DV
Sbjct: 73 TIVSFVESFFDSH-------RDSWIRKLRLDLGYHHDKYDLM-SWIDAATTRRIQHLDV- 123
Query: 131 LRYWDHSRRNLCPFGTHPKASADFDEEMRHSF--TATPPHIFRCDXXXXXXXXNWTLDVP 188
H F P I+ C W +
Sbjct: 124 -----------------------------HCFHDNKIPLSIYTC-TTLVHLRLRWAVLTN 153
Query: 189 AGGVSMPSLETLFLKRI-MAEDGAVQRLISGCPNIADLTLEQCPSVKRLVVASPRLDSFA 247
VS+P L+ + + + + +Q+LISG P + +L L K V+ R D+
Sbjct: 154 PEFVSLPCLKIMHFENVSYPNETTLQKLISGSPVLEELILFSTMYPKGNVL-QLRSDTLK 212
Query: 248 MICCHHASHVVLQAERLRTLRYKGGLPGENFFSIANCGDVLAMTIDICESLLGKSASAVV 307
+ + VV+ A L+ LR K + F I + G + ID + G
Sbjct: 213 RLDINEFIDVVIYAPLLQCLRAK--MYSTKNFQIISSGFPAKLDIDFVNT--GGRYQKKK 268
Query: 308 PITKVITRCTNVTFLHLHLRPTMAFHSGTFTRALRHLPHLRQLALKGLLDNDETALSVST 367
I ++ + V L + F + +R L ++ L + + + E + T
Sbjct: 269 VIEDILIDISRVRDLVISSNTWKEFFLYSKSRPLLQFRYISHLNARFYISDLEM---LPT 325
Query: 368 LLRNTPNLDVLSL 380
LL + P L+ L L
Sbjct: 326 LLESCPKLESLIL 338
>AT1G55030.1 | chr1:20530417-20531768 REVERSE LENGTH=423
Length = 422
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 135/347 (38%), Gaps = 77/347 (22%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGNVSGQ 78
D +S LP+ + ++L L + A TS LS++W++ +P
Sbjct: 9 DMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMP------------------- 49
Query: 79 KTCFDHQVTAAILGKDLPTRKFRLDAFYPPYDLRDQWFAIVSVSG--LEEFDVKLRYWDH 136
K D+F DL + ++S L+ F +K+R
Sbjct: 50 --------------------KLEFDSFLRRLDLENVTKCLLSHKAPVLQTFSLKVRL--- 86
Query: 137 SRRN-------LCPFGTHPKASADFDEEMRHSFTAT-PPHIFRCDXXXXXXXX-NWTLDV 187
RRN L E H T T P ++ C+ N +DV
Sbjct: 87 DRRNNAVDIGCLIGIAMTRNVRKLVLEVYFHRGTFTFPRSLYHCETLETLELILNVVMDV 146
Query: 188 PAGGVSMPSLETLFLKRI-MAEDGAVQRLISGCPNIADLTLEQCPS--VKRLVVASPRLD 244
P V + SL+TL+L + +D +V L+SGCPN+ DL + + S VK +A P L
Sbjct: 147 PPS-VYLKSLKTLYLLAVDFKDDESVINLLSGCPNLQDLVMRRNSSSNVKTFTIAVPSLQ 205
Query: 245 SFAMICCHHASHV------VLQAERLRTLRYKGGLPGENFFSIANCGDVLAMTIDICESL 298
A+ H+ S + L+ L+ +G E+F + N +++ + I +
Sbjct: 206 RLAI---HNGSGTPQHCGYTINTPSLKYLKLEGSKAFESFM-VENVSELIEVNITDVSEI 261
Query: 299 LGKSASAVVPITKVITRCTNVTFLHLHLRPTM-AFHSGTFTRALRHL 344
+ + K+ T+VT L L L P++ F +G L +L
Sbjct: 262 IDE---------KLRVFLTSVTRLSLALSPSVFTFPTGIIFNQLVYL 299
>AT3G49150.1 | chr3:18218858-18221877 FORWARD LENGTH=631
Length = 630
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 43/220 (19%)
Query: 17 RRDRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDP-----KKGER 71
++D +SDLP+A + +L L ++ +TS LS++W+++ A P ++ D GER
Sbjct: 14 KKDIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGER 73
Query: 72 WGNVSGQKTCFDHQVTAAI-LGKDLPTRKFRLDA--FYPPYDLRDQWFAIVSVSGLEEFD 128
+T F++ V + L D P KF L F P + +W + V G+ + D
Sbjct: 74 ------NETIFENFVDRVLSLQGDYPINKFSLTCRDFTDPTCVS-RWISNVMERGVSDLD 126
Query: 129 VK-LRYWDHSRRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDV 187
++ + YWD+ GT P + + H T F +
Sbjct: 127 LRCIVYWDN--------GTMP-PDIFVSKALVHLRIETGNGAF----------------I 161
Query: 188 PAGGVSMPSLETLFLKRIMA--EDGAVQRLISGCPNIADL 225
V +P+L+TL+L +++ D +LI+ C + DL
Sbjct: 162 DVEDVFLPNLKTLYLNKVLLRHSDNGFVKLITSCHVLEDL 201
>AT5G38386.1 | chr5:15363178-15364815 FORWARD LENGTH=404
Length = 403
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVD-------PKKGER 71
D LS+LPD L ++ L + A + S LS+RWRN+ A VP +D+ D +K ER
Sbjct: 2 DHLSNLPDELLCHIMSFLTTKEAALISVLSKRWRNLIAFVPNLDIFDCDILHWEVRKEER 61
Query: 72 WGNVSGQKTCFDHQVTAAILGKDLPTRKFRLDAFYPPYDLR-DQWFAIVSVSGLEEFDVK 130
++ F +V A L + P +KF L Y R D W V V G+ E D+
Sbjct: 62 -DDIRQLFMDFVDRVLA--LQGNSPLKKFSLCCGGGSYSDRVDCWIQNVMVRGVSELDLS 118
Query: 131 LRY 133
+ +
Sbjct: 119 MIF 121
>AT5G56380.1 | chr5:22838836-22840353 REVERSE LENGTH=440
Length = 439
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 30/216 (13%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKK-GERWGNVSG 77
DR+S L D L+++L LG+ + T LS+R+++ VP ++ D E WG
Sbjct: 2 DRISHLADEILSKILSFLGTKDVMQTMLLSKRFKSQWLLVPKLEFDDSTHLPETWGYQEP 61
Query: 78 QKTCFDHQVTAAIL---GKDLPTRKFRLDAFYPPYDLRDQWFAIVSVSGLEEFDVKLRYW 134
F V ++L G+ L T +L YD W I GL E +KL+Y
Sbjct: 62 DYGNFRRFVDRSLLSREGRVLQTLFLKLGR-QCSYDDIAIWVGIAVKRGLME--LKLKYT 118
Query: 135 DHSRRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDVPAGGVSM 194
D +PK S + P ++ C+ LDVP V +
Sbjct: 119 D---------SYYPKRS------------SLPRSLYTCETLVVLKLKKGYLDVP-DLVCL 156
Query: 195 PSLETLFLKRIMAEDGA-VQRLISGCPNIADLTLEQ 229
SL+TL L+ + + + + RL++ CP + +L ++Q
Sbjct: 157 RSLKTLSLRDMNYSNASCLLRLLASCPVLEELFIQQ 192
>AT1G32375.1 | chr1:11679230-11680679 FORWARD LENGTH=423
Length = 422
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 38/220 (17%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVDLVDPKKGERWGN---- 74
D+LS LP+A L R+L L + + T LS+RW+ + VP + D + +G+
Sbjct: 2 DKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDSYQAIEYGSFSRF 61
Query: 75 VSGQKTCFDHQVTAAILGKDLPTRKFRL-DAFYPPYDLRDQWFAIVSVSGLEEFDVKLRY 133
V T D QV L T F+L D+R W S L E +++
Sbjct: 62 VDRSFTLHDAQV--------LDTLHFKLGKTSCGTGDIR-VWIKTAEKSCLRELIIEI-- 110
Query: 134 WDHSRRNLCPFGTHPKASADFDEEMRHSFTATPPHIFRCDXXXXXXXXNWTLDVPA-GGV 192
K+++D +S P ++ C N + V A
Sbjct: 111 --------------DKSNSD------NSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSF 150
Query: 193 SMPSLETLFLKRI-MAEDGAVQRLISGCPNIADLTLEQCP 231
S PSL+TL L + D ++ L+S CP + DL +++CP
Sbjct: 151 SFPSLKTLSLVSMKFPGDELIKMLLSNCPVLEDLVVKRCP 190
>AT3G59150.1 | chr3:21872729-21874422 FORWARD LENGTH=510
Length = 509
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 5/58 (8%)
Query: 19 DRLSDLPDATLARVLYHLGSVNATVTSALSRRWRNVHAAVPVVD-----LVDPKKGER 71
D +S+LP+ L R+L +L + A +TS LS+RW N+ ++P++D L+ P+KG+R
Sbjct: 47 DVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQR 104
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,930,209
Number of extensions: 365447
Number of successful extensions: 1138
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 13
Length of query: 407
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 306
Effective length of database: 8,337,553
Effective search space: 2551291218
Effective search space used: 2551291218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)