BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0167800 Os04g0167800|AK108398
(337 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G59960.1 | chr1:22071410-22073067 REVERSE LENGTH=327 261 4e-70
AT1G59950.1 | chr1:22068033-22070588 REVERSE LENGTH=321 236 2e-62
AT2G37770.2 | chr2:15834888-15836659 FORWARD LENGTH=316 194 6e-50
AT5G62420.1 | chr5:25064835-25066111 FORWARD LENGTH=317 188 3e-48
AT2G37790.1 | chr2:15838838-15840752 FORWARD LENGTH=315 186 2e-47
AT3G53880.1 | chr3:19953238-19955171 FORWARD LENGTH=316 176 1e-44
AT2G37760.2 | chr2:15831995-15833742 FORWARD LENGTH=312 172 2e-43
AT5G01670.2 | chr5:252000-253856 FORWARD LENGTH=350 152 2e-37
AT2G21250.1 | chr2:9103408-9105116 REVERSE LENGTH=310 137 6e-33
AT2G21260.1 | chr2:9105693-9107308 REVERSE LENGTH=310 136 2e-32
>AT1G59960.1 | chr1:22071410-22073067 REVERSE LENGTH=327
Length = 326
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 176/312 (56%), Gaps = 7/312 (2%)
Query: 29 HAMPVLGFGTGSST--PPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXXXX 86
H+MPVLGFGT +S P L T+ A++LGYRH DT
Sbjct: 19 HSMPVLGFGTAASPLPEPTMLKETVIEAIKLGYRHFDTSPRYQTEEPIGEALAEAVSLGL 78
Query: 87 XXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGELT 146
SR E FVTTKL ADAH VV A++ SL L LDY+DL++IHWPV+ +
Sbjct: 79 VRSRSEFFVTTKLWCADAHGGLVVPAIKRSLKNLKLDYLDLYIIHWPVSSKPGKYKFPID 138
Query: 147 WDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQVEM 206
DD +P D E VW MEEC RLGLA+ IGVSNFS K+ NQVEM
Sbjct: 139 EDDF----MPMDFEVVWSEMEECQRLGLAKCIGVSNFSCKKLQHILSIATIPPSVNQVEM 194
Query: 207 NVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQVAL 266
+ W+Q AYS LG+ GA WG+ +M S VL ++A A+ KT+AQV++
Sbjct: 195 SPIWQQRKLRELCRSNDIVVTAYSVLGSRGAFWGTPKIMESDVLKEIAEAKEKTVAQVSM 254
Query: 267 RWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAG-VPQRRACHGNYFVSPDGP 325
RW YEQGV MV +SF + R+++N+ IFDW L++ + I+ +PQ R HG + S GP
Sbjct: 255 RWAYEQGVSMVVKSFTKERLEENLKIFDWSLTEDETQRISTEIPQFRNVHGEVYTSKKGP 314
Query: 326 YKSLHDLWDGEI 337
KS+ ++WDGEI
Sbjct: 315 IKSVAEMWDGEI 326
>AT1G59950.1 | chr1:22068033-22070588 REVERSE LENGTH=321
Length = 320
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 176/312 (56%), Gaps = 7/312 (2%)
Query: 29 HAMPVLGFGTGSSTPPAD--LAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXXXX 86
H MPVL GT +S PP L T+ A++LGYRH DT
Sbjct: 13 HLMPVLALGTAASPPPEPIVLKRTVLEAIKLGYRHFDTSPRYQTEEPLGEALAEAVSLGL 72
Query: 87 XXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGELT 146
SR ELFVT+KL ADAH VV A++ SL L LDY+DL+LIHWPV+ +
Sbjct: 73 IQSRSELFVTSKLWCADAHGGLVVPAIQRSLETLKLDYLDLYLIHWPVSSKPGKYKFPIE 132
Query: 147 WDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQVEM 206
DD +P D E VW MEEC RLG+A+ IGVSNFS K+ NQVEM
Sbjct: 133 EDDF----LPMDYETVWSEMEECQRLGVAKCIGVSNFSCKKLQHILSIAKIPPSVNQVEM 188
Query: 207 NVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQVAL 266
+ W+Q AYS LG+ GA WG+ +M S VL ++A A+ KT+AQV++
Sbjct: 189 SPVWQQRKLRELCKSKGIVVTAYSVLGSRGAFWGTHKIMESDVLKEIAEAKGKTVAQVSM 248
Query: 267 RWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAG-VPQRRACHGNYFVSPDGP 325
RW YE+GV MV +SF + R+++N+ IFDW L++++K I+ + Q R G ++S GP
Sbjct: 249 RWAYEEGVSMVVKSFRKDRLEENLKIFDWSLTEEEKQRISTEISQSRIVDGEVYISEKGP 308
Query: 326 YKSLHDLWDGEI 337
KS+ ++WDGEI
Sbjct: 309 IKSVTEMWDGEI 320
>AT2G37770.2 | chr2:15834888-15836659 FORWARD LENGTH=316
Length = 315
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 158/314 (50%), Gaps = 9/314 (2%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXX 84
LN+G P +G GT ++P + +A AV++GYRH+D
Sbjct: 10 LNTGAKFPSVGLGTWQASP-GLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFED 68
Query: 85 XXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGE 144
R +LF+T+KL D P V AL +L L L+YVDL+LIHWP I K +
Sbjct: 69 RVV-KREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIK 127
Query: 145 LTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQV 204
L+P D+ W+ ME + G AR+IGVSNFS K++ NQV
Sbjct: 128 ------PENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQV 181
Query: 205 EMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQV 264
E + WRQ +AYSPLG+ G W V+ + +L+ VA K+ AQV
Sbjct: 182 ECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPAQV 241
Query: 265 ALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFVSPD- 323
ALRW + G ++ +S NEGR+K+N ++FDW + D A A + Q R G++ V
Sbjct: 242 ALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTGSFLVHETL 301
Query: 324 GPYKSLHDLWDGEI 337
PYKS+ +LWDGEI
Sbjct: 302 SPYKSIEELWDGEI 315
>AT5G62420.1 | chr5:25064835-25066111 FORWARD LENGTH=317
Length = 316
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 161/317 (50%), Gaps = 12/317 (3%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIA---HAVRLGYRHLDTXXXXXXXXXXXXXXXXX 81
L G +P+LG GT P D +TI+ A+++GYRH DT
Sbjct: 8 LRCGETIPLLGMGT--YCPQKDRESTISAVHQAIKIGYRHFDTAKIYGSEEALGTALGQA 65
Query: 82 XXXXXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDA 141
R +LFVT+KL +D H P ++AL ++L +GLDY+D +L+HWP+ + +
Sbjct: 66 ISYGTV-QRDDLFVTSKLWSSDHHDP--ISALIQTLKTMGLDYLDNYLVHWPIKLKPGVS 122
Query: 142 AGELTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXX 201
D+ + L +E W+GME C +GL RSIGVSNFS+ K+
Sbjct: 123 EPIPKEDEFEKDL---GIEETWQGMERCLEMGLCRSIGVSNFSSKKIFDLLDFASVSPSV 179
Query: 202 NQVEMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTI 261
NQVEM+ WRQ + YSPLG G WGS AV+ ++ +A T
Sbjct: 180 NQVEMHPLWRQRKLRKVCEENNIHVSGYSPLGGPGNCWGSTAVIEHPIIKSIALKHNATP 239
Query: 262 AQVALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFVS 321
AQVALRW +G ++ +SFN RM +N + +L DQD ++I + + + G++ V+
Sbjct: 240 AQVALRWGMSKGASVIVKSFNGARMIENKRALEIKLDDQDLSLIDHLEEWKIMRGDFLVN 299
Query: 322 -PDGPYKSLHDLWDGEI 337
PYKS+ LWD EI
Sbjct: 300 QTTSPYKSIQQLWDNEI 316
>AT2G37790.1 | chr2:15838838-15840752 FORWARD LENGTH=315
Length = 314
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 155/313 (49%), Gaps = 8/313 (2%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXX 84
LN+G +P +G GT + P + + AV++GYRH+D
Sbjct: 10 LNTGAKIPSVGLGTWQADP-GLVGNAVDAAVKIGYRHIDCAQIYGNEKEIGLVLKKLFDG 68
Query: 85 XXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGE 144
R E+F+T+KL P V AL +L L LDYVDL+LIHWPV++ K +
Sbjct: 69 GVV-KREEMFITSKLWCTYHDPQEVPEALNRTLQDLQLDYVDLYLIHWPVSLKKGSTGFK 127
Query: 145 LTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQV 204
++P D+ W+ ME G AR+IGVSNFS+ K++ NQV
Sbjct: 128 ------PENILPTDIPSTWKAMESLFDSGKARAIGVSNFSSKKLADLLVVARVPPAVNQV 181
Query: 205 EMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQV 264
E + W+Q + YSPLG+ G W + V+ + +L VA KT AQV
Sbjct: 182 ECHPSWQQNVLRDFCKSKGVHLSGYSPLGSPGTTWLTSDVLKNPILGGVAEKLGKTPAQV 241
Query: 265 ALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFVSPDG 324
ALRW + G ++ +S +E R+KQN D+F+W + + + + + Q R G FV
Sbjct: 242 ALRWGLQMGQSVLPKSTHEDRIKQNFDVFNWSIPEDMLSKFSEIGQGRLVRGMSFVHETS 301
Query: 325 PYKSLHDLWDGEI 337
PYKSL +LWDGEI
Sbjct: 302 PYKSLEELWDGEI 314
>AT3G53880.1 | chr3:19953238-19955171 FORWARD LENGTH=316
Length = 315
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 154/314 (49%), Gaps = 9/314 (2%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXX 84
LN+G +P +G GT + P + +A AV++GY+H+D
Sbjct: 10 LNTGAKIPSVGLGTWQAAP-GVVGDAVAAAVKIGYQHIDCASRYGNEIEIGKVLKKLFDD 68
Query: 85 XXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGE 144
R +LF+T+K+ + D PP V AL +L L LDYVDL+L+HWPV + K
Sbjct: 69 GVV-KREKLFITSKIWLTDLDPPDVQDALNRTLQDLQLDYVDLYLMHWPVRLKKG----- 122
Query: 145 LTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQV 204
T D ++P D+ W+ ME G AR+IGVSNFS K+S NQV
Sbjct: 123 -TVDFKPENIMPIDIPSTWKAMEALVDSGKARAIGVSNFSTKKLSDLVEAARVPPAVNQV 181
Query: 205 EMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQV 264
E + W+Q + YSPLG+ G W V+ S V+ +A K+ AQ
Sbjct: 182 ECHPSWQQHKLHEFCKSKGIHLSGYSPLGSPGTTWVKADVLKSPVIEMIAKEIGKSPAQT 241
Query: 265 ALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFVSPD- 323
ALRW + G ++ +S NEGR+++N D+ W + + + + Q R G FV
Sbjct: 242 ALRWGLQMGHSILPKSTNEGRIRENFDVLGWSIPKEMFDKFSKIEQARLVQGTSFVHETL 301
Query: 324 GPYKSLHDLWDGEI 337
PYK+L +LWDGEI
Sbjct: 302 SPYKTLEELWDGEI 315
>AT2G37760.2 | chr2:15831995-15833742 FORWARD LENGTH=312
Length = 311
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXX 84
LN+G +P +G GT A +A I A+++GYRH+D
Sbjct: 10 LNTGAKLPCVGLGTY-----AMVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGD 64
Query: 85 XXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVAIGKKDAAGE 144
R ELF+T+KL D P V AL ++L L +DYVDL+LIHWP ++ K+
Sbjct: 65 GFV-KREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLM-- 121
Query: 145 LTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXXXXXXNQV 204
L D+ W+ ME + G AR+IGVSNFS+ K++ NQV
Sbjct: 122 ----PTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQV 177
Query: 205 EMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAHWGSDAVMNSGVLHDVAAARCKTIAQV 264
E + W+Q + YSPLG+ V+ + ++ +VA KT AQV
Sbjct: 178 ECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVAEKLGKTTAQV 237
Query: 265 ALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQRRACHGNYFV-SPD 323
ALRW + G ++ +S + R+K+N+D+FDW + + + +PQ + C F
Sbjct: 238 ALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHETH 297
Query: 324 GPYKSLHDLWDGEI 337
G YK++ +LWDGEI
Sbjct: 298 GFYKTIEELWDGEI 311
>AT5G01670.2 | chr5:252000-253856 FORWARD LENGTH=350
Length = 349
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 160/346 (46%), Gaps = 49/346 (14%)
Query: 25 LNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXXXX 84
L SGH +P +G GT S A A A V GYRH+DT
Sbjct: 18 LLSGHKIPAVGLGTWRSGSQAAHAVVTA-IVEGGYRHIDTAWEYGDQREVGQGIKRAMHA 76
Query: 85 XXXXSRGELFVTTKL---------------------------SMADAHPPRVVAALRESL 117
R +LFVT+KL + P RV AL+ +L
Sbjct: 77 GL--ERRDLFVTSKLWYTLILRKMINLSSPLMNVLVGTCLNKRCTELSPERVRPALQNTL 134
Query: 118 SRLGLDYVDLFLIHWPVAI----GKKDAAGELTWDDLSRGLVPFDMEGVWRGMEECHRLG 173
L L+Y+DL+LIHWP+ + K AG++ + FDMEGVWR ME +
Sbjct: 135 KELQLEYLDLYLIHWPIRLREGASKPPKAGDV---------LDFDMEGVWREMENLSKDS 185
Query: 174 LARSIGVSNFSAAKMSRXXXXXXXXXXXNQVEMNVGWRQXXXXXXXXXXXXXXAAYSPLG 233
L R+IGV NF+ K+++ Q+EM+ GWR AYSPLG
Sbjct: 186 LVRNIGVCNFTVTKLNKLLGFAELIPAVCQMEMHPGWRNDRILEFCKKNEIHVTAYSPLG 245
Query: 234 AHGAHWGSDAVMNSGVLHDVAAARCKTIAQVALRWLYEQGVCMVARSFNEGRMKQNMDIF 293
+ G D + + V +A KT Q+ ++W ++G ++ +S N R+K+N+ +F
Sbjct: 246 SQEG--GRDLIHDQTV-DRIAKKLNKTPGQILVKWGLQRGTSVIPKSLNPERIKENIKVF 302
Query: 294 DWELSDQD-KAMIAGVPQRRACHG-NYFVSP-DGPYKSLHDLWDGE 336
DW + +QD +A+ + Q+R G + FV+ +GP++S+ DLWD E
Sbjct: 303 DWVIPEQDFQALNSITDQKRVIDGEDLFVNKTEGPFRSVADLWDHE 348
>AT2G21250.1 | chr2:9103408-9105116 REVERSE LENGTH=310
Length = 309
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 14/297 (4%)
Query: 23 VTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXX 82
+TLNSG MP++G G + I +A+++GYRHLD
Sbjct: 3 ITLNSGFKMPIVGLGVWRMEKEG-IRDLILNAIKIGYRHLDCAADYRNETEVGDALTEAF 61
Query: 83 XXXXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVA-----IG 137
R +LF+TTKL +D V+ A ++SL +L LDY+DLFL+H+PVA +G
Sbjct: 62 KTGLV-KREDLFITTKLWNSDH--GHVIEACKDSLKKLQLDYLDLFLVHFPVATKHTGVG 118
Query: 138 KKDAAGELTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXXXXXX 197
D+A L D + +E W ME+ +GL RSIG+SN+
Sbjct: 119 TTDSA--LGDDGVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLAYSKI 176
Query: 198 XXXXNQVEMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAH---WGSDAVMNSGVLHDVA 254
NQ+E + +++ A++PLG A+ +G+ + ++ VL DVA
Sbjct: 177 KPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVLKDVA 236
Query: 255 AARCKTIAQVALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQR 311
KT+AQV LRW ++ ++ ++ R+++N +FD+ELS +D +I + ++
Sbjct: 237 EKYKKTVAQVVLRWGIQRKTVVIPKTSKPARLEENFQVFDFELSKEDMEVIKSMERK 293
>AT2G21260.1 | chr2:9105693-9107308 REVERSE LENGTH=310
Length = 309
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 147/305 (48%), Gaps = 22/305 (7%)
Query: 23 VTLNSGHAMPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTXXXXXXXXXXXXXXXXXX 82
+TLNSG MP++G G +L I A+++GYRHLD
Sbjct: 3 ITLNSGFKMPIIGLGVWR-MEKEELRDLIIDAIKIGYRHLDCAANYKNEAEVGEALTEAF 61
Query: 83 XXXXXXSRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVDLFLIHWPVA-----IG 137
R +LF+TTKL +D V+ A ++SL +L LDY+DLFL+H P+A IG
Sbjct: 62 TTGLV-KREDLFITTKLWSSDH--GHVIEACKDSLKKLQLDYLDLFLVHIPIATKHTGIG 118
Query: 138 KKDAAGELTWDDLSRGLVPFD----MEGVWRGMEECHRLGLARSIGVSNFSAAKMSRXXX 193
D+A DD G++ D +E W ME+ +GL RSIG+SN+
Sbjct: 119 TTDSA---LGDD---GVLDIDTTISLETTWHDMEKLVSMGLVRSIGISNYDVFLTRDCLA 172
Query: 194 XXXXXXXXNQVEMNVGWRQXXXXXXXXXXXXXXAAYSPLGAHGAH---WGSDAVMNSGVL 250
NQ+E + +++ A++PLG A+ +G+ + ++ VL
Sbjct: 173 YSKIKPAVNQIETHPYFQRDSLVKFCQKHGICVTAHTPLGGATANAEWFGTVSCLDDPVL 232
Query: 251 HDVAAARCKTIAQVALRWLYEQGVCMVARSFNEGRMKQNMDIFDWELSDQDKAMIAGVPQ 310
DVA +T+AQ+ LRW ++ ++ ++ R+++N +FD++LS +D +I + +
Sbjct: 233 KDVAEKYKQTVAQIVLRWGIQRNTVVIPKTSKPERLEENFQVFDFQLSKEDMEVIKSMER 292
Query: 311 RRACH 315
H
Sbjct: 293 NYRTH 297
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,779,182
Number of extensions: 194676
Number of successful extensions: 430
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 393
Number of HSP's successfully gapped: 10
Length of query: 337
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 238
Effective length of database: 8,392,385
Effective search space: 1997387630
Effective search space used: 1997387630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)