BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0165700 Os04g0165700|AK102512
(377 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369 471 e-133
AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434 385 e-107
AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393 374 e-104
AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323 368 e-102
AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325 348 3e-96
AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306 341 3e-94
AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324 334 5e-92
AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324 322 2e-88
AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405 313 1e-85
AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422 127 7e-30
AT3G10050.1 | chr3:3099164-3101741 REVERSE LENGTH=593 54 2e-07
>AT3G61440.1 | chr3:22735885-22737792 FORWARD LENGTH=369
Length = 368
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/345 (66%), Positives = 267/345 (77%), Gaps = 1/345 (0%)
Query: 34 FFSTLQQAAAADPVQS-PGILPGLKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFL 92
FST+ + A ++ P P + AS LIG+TP+V+LNKVTEGC A +AAK E
Sbjct: 24 LFSTVGSPSFAQRLRDLPKDFPSTNAKRDASLLIGKTPLVFLNKVTEGCEAYVAAKQEHF 83
Query: 93 QPSFSVKDRPAISMLEDAEKKGLITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPS 152
QP+ S+KDRPAI+M+ DAEKK LI PGKTTLIEPTSGNMGI LAFMAA+KGY +I+TMPS
Sbjct: 84 QPTCSIKDRPAIAMIADAEKKKLIIPGKTTLIEPTSGNMGISLAFMAAMKGYRIIMTMPS 143
Query: 153 YTSLERRVTMRAFGAKLVLTDPTKGMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYE 212
YTSLERRVTMR+FGA+LVLTDP KGMGGTV+KA +L ++ P AFM QQF NPAN ++H++
Sbjct: 144 YTSLERRVTMRSFGAELVLTDPAKGMGGTVKKAYDLLDSTPDAFMCQQFANPANTQIHFD 203
Query: 213 TTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPG 272
TTGPEIWEDTLG VDIFVM +YLK KNPN KIYGVEPAE+N+LNGGKPG
Sbjct: 204 TTGPEIWEDTLGNVDIFVMGIGSGGTVSGVGRYLKSKNPNVKIYGVEPAESNILNGGKPG 263
Query: 273 PHLITGNGVGFKPEILNMDIMEKVIEVKGEDAVKMARELALKEGLLVGISSGANTVAALE 332
PH ITGNGVGFKPEIL+MD+ME V+EV EDA+KMARELALKEGL+VGISSGANTVAA+
Sbjct: 264 PHAITGNGVGFKPEILDMDVMESVLEVSSEDAIKMARELALKEGLMVGISSGANTVAAIR 323
Query: 333 LAKKPENKGKLIVTVLPSLGERYXXXXXXXXXXXXXXXMQPVPVD 377
LAK PENKGKLIVT+ S GERY M+PV VD
Sbjct: 324 LAKMPENKGKLIVTIHASFGERYLSSVLFDELRKEAEEMKPVSVD 368
>AT3G59760.1 | chr3:22072119-22075345 REVERSE LENGTH=434
Length = 433
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/319 (58%), Positives = 236/319 (73%)
Query: 55 GLKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKG 114
GL I D+ SQLIG+TPMVYLN + +GC A IAAKLE ++P SVKDR SM+ DAE+KG
Sbjct: 110 GLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKG 169
Query: 115 LITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDP 174
I+PGK+ L+EPTSGN GIGLAF+AA +GY LILTMP+ S+ERRV ++AFGA+LVLTDP
Sbjct: 170 FISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229
Query: 175 TKGMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXX 234
KGM G V+KA E+ +N P A+MLQQF+NPAN K+HYETTGPEIW+DT G+VDIFV
Sbjct: 230 AKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIG 289
Query: 235 XXXXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIME 294
+++KEKNP ++ GVEP E+++L+GGKPGPH I G G GF P+ L+ IM+
Sbjct: 290 TGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMD 349
Query: 295 KVIEVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGER 354
+VI + E+A++ A++LALKEGL+VGISSGA AA+++AK+PEN GKLI V PS GER
Sbjct: 350 EVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGER 409
Query: 355 YXXXXXXXXXXXXXXXMQP 373
Y MQP
Sbjct: 410 YLSTPLFQSIREEVEKMQP 428
>AT2G43750.1 | chr2:18129604-18132322 REVERSE LENGTH=393
Length = 392
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/319 (56%), Positives = 235/319 (73%)
Query: 55 GLKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKG 114
GL I D+A+QLIG+TPMVYLN V +GC A +AAKLE ++P SVKDR SM+ DAE+KG
Sbjct: 72 GLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKG 131
Query: 115 LITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDP 174
LITPGK+ L+E TSGN GIGLAF+AA KGY+LILTMP+ SLERRV +RAFGA+LVLT+P
Sbjct: 132 LITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEP 191
Query: 175 TKGMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXX 234
KGM G ++KA E+ + P+++MLQQF+NPAN K+HYETTGPEIWEDT G++DI V
Sbjct: 192 AKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIG 251
Query: 235 XXXXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIME 294
+++KE+ P K+ GVEP E+ +L+GGKPGPH I G G GF P+ L++ I++
Sbjct: 252 TGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVD 311
Query: 295 KVIEVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGER 354
+ I + E+A++ +++LAL+EGLLVGISSGA AA+++AK+PEN GKLI V PS GER
Sbjct: 312 EYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGER 371
Query: 355 YXXXXXXXXXXXXXXXMQP 373
Y MQP
Sbjct: 372 YLSTQLFQSIREECEQMQP 390
>AT4G14880.1 | chr4:8518209-8520050 REVERSE LENGTH=323
Length = 322
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/299 (58%), Positives = 224/299 (74%)
Query: 57 KIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLI 116
+I ++LIG TP+VYLN V EGC R+AAKLE ++P SVKDR SM+ DAEKKGLI
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLI 63
Query: 117 TPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTK 176
PG++ LIEPTSGN G+GLAF AA KGY+LI+TMP+ S ERR+ + AFG +LVLTDP K
Sbjct: 64 KPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAK 123
Query: 177 GMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXX 236
GM G + KA E+ P+ +MLQQFENPAN K+HYETTGPEIW+ T G++D FV
Sbjct: 124 GMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTG 183
Query: 237 XXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEKV 296
KYLKE+N N K+YGVEP E+ +L+GGKPGPH I G G GF P +LN+D++++V
Sbjct: 184 GTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEV 243
Query: 297 IEVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
++V ++++ MAR+LALKEGLLVGISSGA AA++LA++PEN GKL V + PS GERY
Sbjct: 244 VQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERY 302
>AT3G04940.1 | chr3:1365681-1367508 FORWARD LENGTH=325
Length = 324
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/298 (56%), Positives = 224/298 (75%)
Query: 58 IRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLIT 117
I+D A+QLIG TPMVYLN + +GC ARIAAKLE ++P SVK+R A M++DAE KGLIT
Sbjct: 8 IKDDATQLIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKERIAYGMIKDAEDKGLIT 67
Query: 118 PGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTKG 177
PGK+TLIE TSGN GIGLAF+ A KGY+++LTMPS SLER++ + A GA++ LTDP+KG
Sbjct: 68 PGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLTDPSKG 127
Query: 178 MGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXXX 237
+ G + KA E+ +P + ML+QF+NP+N + HY TTGPEIW D+ G+VDI V
Sbjct: 128 VQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAGVGTGG 187
Query: 238 XXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEKVI 297
++LKEKN + K+YGVEP E+ V++GGKPG HLI G G G P+ L+ +++++VI
Sbjct: 188 TLSGSGRFLKEKNKDFKVYGVEPTESAVISGGKPGTHLIQGIGAGLIPDNLDFNVLDEVI 247
Query: 298 EVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
+V +A++ A+ LALKEGLLVGISSGA AA+++AK+PEN GKLIV + PS GERY
Sbjct: 248 QVTSVEAIETAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSGGERY 305
>AT3G22460.1 | chr3:7963855-7965751 FORWARD LENGTH=306
Length = 305
Score = 341 bits (875), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 216/299 (72%), Gaps = 20/299 (6%)
Query: 57 KIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLI 116
KI ++LIG TP+VYLNKV + C +AAKLE ++P SVKDR SM+ DAE KGLI
Sbjct: 7 KIAKDVTELIGNTPLVYLNKVAKDCVGHVAAKLEMMEPCSSVKDRIGYSMIADAEAKGLI 66
Query: 117 TPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTK 176
PG++ LIEPTSGN G+GLAF AA KGY+L++TMP+ S+ERR+ + AFGA+L+LTDP K
Sbjct: 67 KPGESVLIEPTSGNTGVGLAFTAAAKGYKLVITMPASMSIERRIILLAFGAELILTDPAK 126
Query: 177 GMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXX 236
GM G V KA E+ P+ +MLQQFENPAN K+HYETTGPEIW+
Sbjct: 127 GMKGAVAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGA-------------- 172
Query: 237 XXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEKV 296
KYLKE+N N K+YGVEP E+ +L+GGKPGPH I G G GF P IL++D++++V
Sbjct: 173 ------GKYLKEQNTNIKLYGVEPVESPILSGGKPGPHKIQGIGAGFIPGILDVDLIDEV 226
Query: 297 IEVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
++V E+++ MAR LA +EGLLVGISSGA AA++LAK+PEN GKLIV V PS GERY
Sbjct: 227 VQVSSEESIDMARLLAREEGLLVGISSGAAATAAIKLAKRPENAGKLIVAVFPSFGERY 285
>AT5G28020.1 | chr5:10026395-10028166 REVERSE LENGTH=324
Length = 323
Score = 334 bits (856), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 218/298 (73%)
Query: 58 IRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLIT 117
I++ ++LIG TPMVYLN V +GC ARIAAKLE ++P SVKDR A SM++DAE KGLIT
Sbjct: 7 IKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLIT 66
Query: 118 PGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTKG 177
PGK+TLIEPT+GN GIGLA M A +GY++IL MPS SLERR+ +RA GA+L L+D G
Sbjct: 67 PGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSDQRIG 126
Query: 178 MGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXXX 237
+ G + K + P ++ QQFENPAN ++HY TTGPEIW D+ G+VDI V
Sbjct: 127 LKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186
Query: 238 XXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEKVI 297
K+LKE+N + K+ VEP E+ VL+GG+PGPHLI G G G P L++ I++++I
Sbjct: 187 TATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLTIVDEII 246
Query: 298 EVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
+V GE+A++ A+ LALKEGLLVGISSGA AAL++AK+PEN GKLIV V PS GERY
Sbjct: 247 QVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSGGERY 304
>AT5G28030.2 | chr5:10030493-10032285 REVERSE LENGTH=324
Length = 323
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/298 (55%), Positives = 218/298 (73%)
Query: 58 IRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGLIT 117
I++ ++LIG TPMVYLNK+ +GC ARIAAKLE ++P S+KDR A SM++DAE KGLIT
Sbjct: 7 IKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDKGLIT 66
Query: 118 PGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTKG 177
PGK+TLIE T GN GIGLA + A +GY++IL MPS SLERR+ +RA GA++ LTD + G
Sbjct: 67 PGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTDISIG 126
Query: 178 MGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXXX 237
+ G + KA E+ P ++ QF NP N ++HY TTGPEIW D+ G+VDI V
Sbjct: 127 IKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGVGTGG 186
Query: 238 XXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEKVI 297
K+LKEKN + K+ VEP+E+ VL+GGKPGPHLI G G G P L++ I++++I
Sbjct: 187 TVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGKPGPHLIQGIGSGEIPANLDLSIVDEII 246
Query: 298 EVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
+V GE+A++ + LA+KEGLLVGISSGA+ AAL++AK+PEN GKLIV + PS GERY
Sbjct: 247 QVTGEEAIETTKLLAIKEGLLVGISSGASAAAALKVAKRPENVGKLIVVIFPSGGERY 304
>AT3G03630.1 | chr3:878388-880400 REVERSE LENGTH=405
Length = 404
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/300 (52%), Positives = 213/300 (71%), Gaps = 10/300 (3%)
Query: 56 LKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGL 115
+ I + +QLIG TPMVYLN+VT+GC A IAAKLE ++P SVKDR +SM+ +AE G
Sbjct: 97 VNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGA 156
Query: 116 ITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPT 175
ITP KT L+EPT+GN G+G+AF+AA KGY+LI+TMP+ ++ERR+ +RA GA++VLT+P
Sbjct: 157 ITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPE 216
Query: 176 KGMGGTVRKAAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXX 235
KG+ G V KA E+ +A+M QQF+N AN K+H+ETTGPEIWEDT+G VDIFV
Sbjct: 217 KGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGT 276
Query: 236 XXXXXXXXKYLKEKNPNAKIYGVEPAEANVLNGGKPGPHLITGNGVGFKPEILNMDIMEK 295
+LK N + K+ GVEP+E +V++G P G+ P IL++ ++++
Sbjct: 277 GGTVTGTGGFLKMMNKDIKVVGVEPSERSVISGDNP----------GYLPGILDVKLLDE 326
Query: 296 VIEVKGEDAVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
V +V +A++MAR LAL+EGLLVGISSGA VAA+ LAK+ EN GKLI + PS GERY
Sbjct: 327 VFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGERY 386
>AT1G55880.1 | chr1:20899292-20901140 REVERSE LENGTH=422
Length = 421
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 154/358 (43%), Gaps = 60/358 (16%)
Query: 56 LKIRDSASQLIGRTPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISMLEDAEKKGL 115
L +R+ IG TP++ +N ++E G I K EFL P SVKDR A+ ++++A + G
Sbjct: 38 LTMRNGLVDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIQEALESGK 97
Query: 116 ITPGKTTLIEPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGA-------- 167
+ PG + E ++G+ I LA +A G + + +P ++E+ + A GA
Sbjct: 98 LFPGGI-VTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPV 156
Query: 168 ------------------------KLVLTDPTKGM------GGTVRKAAE---LYENHPS 194
K L T G+ G TV + E ++
Sbjct: 157 SITHKDHYVNIARRRADEANELASKRRLGSETNGIHQEKTNGCTVEEVKEPSLFSDSVTG 216
Query: 195 AFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXKYLKEKNPNAK 254
F QFEN AN + HYE TGPEIW T G +D FV ++L++KN K
Sbjct: 217 GFFADQFENLANYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGTLAGVSRFLQDKNERVK 276
Query: 255 IYGVEPAEANVLNGGKPG---------------PHLITGNGVGFKPEILNMDIMEKVIEV 299
+ ++P + + N G P G+G N + +
Sbjct: 277 CFLIDPPGSGLYNKVTRGVMYTREEAEGRRLKNPFDTITEGIGINRLTKNFLMAKLDGGF 336
Query: 300 KGED--AVKMARELALKEGLLVGISSGANTVAALELAKKPENKGKLIVTVLPSLGERY 355
+G D AV+M+R L +GL VG SS N V A+ +A+ G IVT+L G R+
Sbjct: 337 RGTDKEAVEMSRFLLKNDGLFVGSSSAMNCVGAVRVAQTL-GPGHTIVTILCDSGMRH 393
>AT3G10050.1 | chr3:3099164-3101741 REVERSE LENGTH=593
Length = 592
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Query: 69 TPMVYLNKVTEGCGARIAAKLEFLQPSFSVKDRPAISML----EDAEKKGLITPGKTTLI 124
+P+ K+++ G R+ K E LQP FS K R A +M+ D KG+I
Sbjct: 111 SPLQLAKKLSKRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICS------ 164
Query: 125 EPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLTDPTKGMGGTVRK 184
++GN G+A A+ G ++ MP T + + GA +VL + +
Sbjct: 165 --SAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQA---QA 219
Query: 185 AAELYENHPSAFMLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMXXXXXXXXXXXXK 244
A++ + F++P +V T G EI G + +
Sbjct: 220 HAKIRAEEEGLTFIPPFDHP-DVIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIAA 278
Query: 245 YLKEKNPNAKIYGVEPAEANVL 266
Y+K +P KI GVEPA+AN +
Sbjct: 279 YVKRVSPEVKIIGVEPADANAM 300
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,851,523
Number of extensions: 274091
Number of successful extensions: 483
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 478
Number of HSP's successfully gapped: 12
Length of query: 377
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 277
Effective length of database: 8,364,969
Effective search space: 2317096413
Effective search space used: 2317096413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 112 (47.8 bits)