BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0162800 Os04g0162800|Os04g0162800
(752 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804 121 1e-27
AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878 95 1e-19
AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704 95 1e-19
AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867 94 3e-19
AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799 91 3e-18
AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752 79 1e-14
AT4G19080.1 | chr4:10448813-10449796 REVERSE LENGTH=328 70 3e-12
>AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804
Length = 803
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 144/333 (43%), Gaps = 45/333 (13%)
Query: 25 IWSSWSTEILLGLSFVAQLVLTVTAGFRWRGAGSRMRCVIWFSYVSADYVATTALGNLSI 84
+W W+ ++ LS Q +L A R R A +IW +Y+ AD+ A A+G +S
Sbjct: 12 LWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADWAADYAVGQISD 71
Query: 85 S--------RTAGSRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILRVAGA 136
S + + +R L AFW+PF LLHLGGPD++TA LEDN+L RH+ L+ +
Sbjct: 72 SQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRHLFSLVCQAVAT 131
Query: 137 VYIVYKSTSGSWALIPASWLMLFVGVAKYAEKTMXXXXXXXXXXXXXXXX-----XXXXX 191
VY++ S L+ + +M GV KY E+T
Sbjct: 132 VYVILLSIPNR--LLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSMLDDPDPGANYAK 189
Query: 192 XXXXXXXKANLSFAGD-----DDEGG-----------------LLMKAHTLFPICKNSMV 229
+ ++ D D E G ++ A+ F I K +V
Sbjct: 190 LMEEYEARKKMNMPTDVIVVKDPEKGREGNTPVRPDNELTALQVIQYAYKYFNIFKGLIV 249
Query: 230 DSSVETASNTDDAAIVHAKETLFREENYKNVFRVMEMELSLMYDFLYTKAAVIHTWHGYA 289
D + T D++ F + + R++E+EL L+YD L+TKA ++H W G
Sbjct: 250 D-LIFTNQERDES------RKFFDKLTAEEALRIIEVELGLIYDCLFTKAEILHNWTGAV 302
Query: 290 IRAVSPVFTAVSLVLVELSNVAGHHRRSDVVIT 322
R ++ SL L ++ N + DVV+T
Sbjct: 303 FRFIALGCLVASLCLFKM-NKKDQYDGFDVVLT 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 48/240 (20%)
Query: 505 GILTWHIATDIYLSQSVKAIVAAVEDDAV-------LARWLMGIRTLSNYMMHLLAVRPD 557
IL WHIAT++ + + V E+ + R I LS+YMM+LL V+P
Sbjct: 595 SILLWHIATELLYQKPIDKKVTEKEEHSTNREKEEHSNREFSKI--LSDYMMYLLIVQPT 652
Query: 558 MLPGL--VTRKLFELTCDDLARVWSKHQTSTSVGAAGGDDLESSSSSPRNICRLRDLWRV 615
++ + + + F TC++ + + S + + CR
Sbjct: 653 LMSAVSGIAKIRFRDTCEEAKDFFQRRHVDKSRYV--------KKNLMKEACR------- 697
Query: 616 SPKTIEQQNKLAGMLIKQWEWDRKQESGAVELNKYLSRGIELAKKLLHLEVSRKDIDKVL 675
+ ++ M +K DR + L LAK+L++ + + +
Sbjct: 698 --AILSVNTEIDPMAVKG---DRSKS--------VLFDASVLAKELMN------EGENMW 738
Query: 676 QVILEVWVEMLFYAGYRCSKESHAKQLSQGGELTTIVWLMAEHVGL---FLVNKTSKGAE 732
+V+ +VWVE+L YA C + HA QLS+GGEL VWL+ H GL F +N+ A+
Sbjct: 739 EVVSKVWVELLCYASLHCDSQEHASQLSKGGELINFVWLLMAHFGLGDQFQINRDDARAK 798
>AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878
Length = 877
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 21 AMGGIWSSWSTEILLGLSFVAQLVLTVTAGFRWRGAGSRMRCVIWFSYVSADYVATTALG 80
+ IW WS L S Q L A R R + + IW +Y+ AD+ A A G
Sbjct: 8 PIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADWSANFAAG 67
Query: 81 NLSISR--------TAGSRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILR 132
+S S+ S L AFW PF LLHLGGPD++TA LEDN+L RH+L L +
Sbjct: 68 QISDSQGDDPEPGEPKKSAELFAFWVPFLLLHLGGPDTITALALEDNELWLRHLLGLFFQ 127
Query: 133 VAGAVYIVYKSTSGSWALIPASWLMLFVGVAKYAEKTM 170
VY++ +S AL L+ GV KY E+T+
Sbjct: 128 SVATVYVLLQSLPN--ALWKPILLVFATGVIKYVERTL 163
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 114/238 (47%), Gaps = 39/238 (16%)
Query: 494 LRWSLGDELQLGILTWHIATDIYLSQSVKAIVAAVEDDAVLARWLMGIRTLSNYMMHLLA 553
LR+ + + +L WHIAT++ L Q+ K A AR I LS+YMM+LL
Sbjct: 663 LRYVMEMDYDQSLLVWHIATEL-LYQTKKGTKANHS-----AREFSKI--LSDYMMYLLM 714
Query: 554 VRPDMLPGLV--TRKLFELTCDDLARVWSKHQTSTSVGAAGGDDLESSSSSPRNICRLRD 611
++P ++ +V + F TC++ R + + + A D + +S
Sbjct: 715 MQPTLMSAVVGIGKIRFRDTCEEAQRFFDRRHI-MGISAKKAPDAKEAS----------- 762
Query: 612 LWRVSPKTIEQQNKLAGMLIKQWEWDRKQESGAVELNKYLSRGIELAKKLLHLEVSRKDI 671
V+ ++ K + +K DR + L G LAK+L L +++D
Sbjct: 763 ---VAILSVAVPAKAEPIDVKG---DRSKS--------VLFDGAMLAKELKGLRKNKEDD 808
Query: 672 DKVLQVILEVWVEMLFYAGYRCSKESHAKQLSQGGELTTIVWLMAEHVGL---FLVNK 726
++ +++ +VWVE+L YA +C HA QLS+GGEL + VWL+ H GL F +N+
Sbjct: 809 SEMWKIMSQVWVELLSYAATKCGAIEHAAQLSKGGELISFVWLLMAHFGLGDQFQINQ 866
>AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704
Length = 703
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 26 WSSWSTEILLGLSFVAQLVLTVTAGFRWRGAGSRMRCVIWFSYVSADYVATTALG----- 80
W W+ + LS Q L + R R + VIW SY+ AD+ A A+G
Sbjct: 13 WDRWNIRGTIFLSLTLQAFLICFSPLRKRTPRRHLIIVIWSSYLLADWSANFAVGLISKN 72
Query: 81 ---NLSISRTAGSRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILRVAGAV 137
+L ++L A WAPF LLHLGGPD++TA+ LEDN L R+V L+ + V
Sbjct: 73 QGKDLKPDDPPQDKKLMALWAPFLLLHLGGPDTITAFALEDNALWLRNVFGLVFQAIAGV 132
Query: 138 YIVYKSTSGS-WALIPASWLMLFV-GVAKYAEKT 169
Y+V +S S W I L++F+ G KY E+T
Sbjct: 133 YVVLQSLPNSLWVTI----LLVFISGTIKYLERT 162
>AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867
Length = 866
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 22 MGGIWSSWSTEILLGLSFVAQLVLTVTAGFRWRGAGSRMRCVIWFSYVSADYVATTALG- 80
+ +W W+ + LS Q +L + R R + ++W SY+ AD+ A A+G
Sbjct: 9 IKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADWSANFAVGL 68
Query: 81 -------NLSISRTAGSRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILRV 133
+L +++ A WAPF LLHLGGPD++TA+ LEDN L RHV L+ +
Sbjct: 69 ISKNQGKDLKPDDPPQDKKVMALWAPFLLLHLGGPDTITAFALEDNALWLRHVFGLVFQA 128
Query: 134 AGAVYIVYKSTSGS-WALIPASWLMLFV-GVAKYAEKT 169
VY+V S S W +I +++FV G KY E+T
Sbjct: 129 IAGVYVVVMSLPNSLWVVI----VLVFVSGTIKYLERT 162
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 45/230 (19%)
Query: 505 GILTWHIATDIYLSQSVKAIVAAVEDDA---VLARWLMGIRTLSNYMMHLLAVRPDMLPG 561
+L WHIAT++ Q K + D+ R I +S+YMM+LL ++P ++
Sbjct: 663 SLLMWHIATELCYQQHEKETIPEGYDEQRKHYSNREFSKI--ISDYMMYLLILQPGLMSE 720
Query: 562 L--VTRKLFELTCDDLARVWSKHQTSTSVGAAGGDDLESSSSSPRNICRLRDLWRVSPKT 619
+ + + F T + + + + R+I R + +
Sbjct: 721 VAGIGKIRFRDTLAETHKFFQR----------------------RHIENDRSVETATLNI 758
Query: 620 IEQQNKLAGMLIKQWEWDRKQESGAVELNKYLSRGIELAKKLLHLEVSRKDIDKVLQVIL 679
++ ++++ M +K DR + L LAK L +E + DK +++
Sbjct: 759 LDVESEIEPMGVKG---DRSKS--------VLFDASRLAKDLAEMEKTHNK-DK-WEILS 805
Query: 680 EVWVEMLFYAGYRCSKESHAKQLSQGGELTTIVWLMAEHVGL---FLVNK 726
+VWVE+L YA C +H +QLS+GGEL VWL+ H GL F +NK
Sbjct: 806 KVWVELLCYAACHCDSTAHVEQLSRGGELINFVWLLMAHFGLTDQFQINK 855
>AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799
Length = 798
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 21 AMGGIWSSWSTEILLGLSFVAQLVLTVTAGFRWRGAGSRMRCVIWFSYVSADYVATTALG 80
A+ I W+ L+ +S + Q L A R R + + V+W +Y+ AD+ A A+
Sbjct: 7 AIKKILDKWNIRGLVIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTANYAVS 66
Query: 81 NLSISR--------TAGSRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILR 132
++ ++ +++L A WAPF LLHLGGPD++TA LEDN L RH+ L+ +
Sbjct: 67 QITKNQGKETEPGDPPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWQRHLFGLVSQ 126
Query: 133 VAGAVYIVYKSTSGSWALIPASWLMLFVGVAKYAEKT 169
VY V +S L P L+ G KY E+T
Sbjct: 127 ALAGVYAVVQSLEN--VLWPPITLLFITGTIKYVERT 161
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 505 GILTWHIATDIYLSQSVKAIVAAVEDDAVLARWLMGIRTLSNYMMHLLAVRPDMLPGLVT 564
+L WHIAT++ + + + + R I +S+YMM+LL +RP ++ +
Sbjct: 596 SLLLWHIATELCFQKEEGGKMEKLSREGYDDREFSKI--ISDYMMYLLIMRPKLMSEV-- 651
Query: 565 RKLFELTCDDLARVWSKHQTSTSVGAAGGDDLESSSS---SPRNICRLRDLWRVSPKTIE 621
+G D ++ + R I LRD+ R S +
Sbjct: 652 ---------------------AGIGTIRFRDTKAEAERFFKGRQIKDLRDMKRASETVLL 690
Query: 622 QQNKLAGMLIKQWEWDRKQESGAVELNKYLSRGIELAKKLLHLEVSRKDIDKVLQVILEV 681
N + +L+K DR S +V + + LAK+L +L+ S + D +V+ +V
Sbjct: 691 VSNDIEPILVKG---DR---SKSVLFDASM-----LAKELQNLKESSNE-DGKWRVLSKV 738
Query: 682 WVEMLFYAGYRCSKESHAKQLSQGGELTTIVWLMAEHVGL---FLVNK 726
WVE+L YA C H QLS+GGEL VWL+ H GL F +NK
Sbjct: 739 WVELLCYAASHCKATEHVAQLSRGGELLNFVWLLMAHFGLGDQFQINK 786
>AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752
Length = 751
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 90 SRRLAAFWAPFFLLHLGGPDSVTAYELEDNQLSARHVLELILRVAGAVYIVYKSTSGSWA 149
+++L A WAPF LLHLGGPD++TA+ LEDN L RH L L+ + VY+V +S +
Sbjct: 79 NKKLVALWAPFLLLHLGGPDTITAFSLEDNALWNRHFLGLVFQALAGVYVVVQSLPNVLS 138
Query: 150 LIPASWLMLFV-GVAKYAEKTM 170
+I L+LF+ G +KY E+T+
Sbjct: 139 VI---ILLLFIAGTSKYLERTI 157
>AT4G19080.1 | chr4:10448813-10449796 REVERSE LENGTH=328
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 43/235 (18%)
Query: 501 ELQLGILTWHIATDIYLSQSVKAIVAAVEDDAVLARWLMGIRTLSNYMMHLLAVRPDMLP 560
E GIL WH+AT++ L Q+ V++ A R +T+S+YMM+LL + ++
Sbjct: 112 EYDQGILVWHVATEL-LHQT------EVDNAARNVRSKEYSKTISDYMMYLLVAQSSLM- 163
Query: 561 GLVTRKLFELTCDDLARVWSKHQTSTSVGAAGGDDLESSSSSPRNICRLRDLW-RVSPKT 619
++V + + + +N + L+ ++ +
Sbjct: 164 -------------------------STVAGIDKIKFKDAIAEAKNSKEAKKLFQKMHVEG 198
Query: 620 IEQQNKLAGMLIKQWEWDRKQESGAVELNKYLSRGI-----ELAKKLLHLEVSRKDIDKV 674
K ++ + + E G +Y S+ + LAK+LLH+ R + D +
Sbjct: 199 SRDAKKACAAIVDSF---TEFELGNGNARRYQSKSMLFQASMLAKELLHITNERGN-DAM 254
Query: 675 LQVILEVWVEMLFYAGYRCSKESHAKQLSQGGELTTIVWLMAEHVGLFLVNKTSK 729
+V+ +VWVEML YA C + HA QL++GGEL VWL+ H GL +T+K
Sbjct: 255 WKVVSKVWVEMLCYAATHCDSKQHAAQLNKGGELINFVWLLMAHFGLGEQFRTTK 309
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,050,291
Number of extensions: 569480
Number of successful extensions: 1408
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1402
Number of HSP's successfully gapped: 11
Length of query: 752
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 646
Effective length of database: 8,200,473
Effective search space: 5297505558
Effective search space used: 5297505558
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)