BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0129500 Os04g0129500|AK120404
(1031 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039 1091 0.0
AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097 466 e-131
AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081 449 e-126
AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746 83 7e-16
AT3G23660.2 | chr3:8513666-8517729 REVERSE LENGTH=792 53 7e-07
AT2G21630.1 | chr2:9250346-9253829 FORWARD LENGTH=762 52 2e-06
>AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039
Length = 1038
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/772 (68%), Positives = 623/772 (80%), Gaps = 6/772 (0%)
Query: 263 LQSLVEDFQSLSVSSAPGSLDPGVDVKGLPRPLDGDEEPTKVLEAYPLNCHPRYFRLTTH 322
+Q L EDF SLS+SS PGSL+PG+D K PRPLDGD EP E YP+NCH RY RLTT
Sbjct: 267 VQGLTEDFNSLSLSSIPGSLEPGLDHKSFPRPLDGDVEPNSFAEMYPMNCHSRYLRLTTS 326
Query: 323 AIPASQSLVSRWHLPLGAVVHPLAESPDGE-VPVINFGSAGVIRCRRCRTYINPYATFAD 381
AIP SQSL SRWHLPLGAVV PLAE+P+GE VP+I+FGS G+IRCRRCRTY+NP+ TF D
Sbjct: 327 AIPNSQSLASRWHLPLGAVVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNPFVTFTD 386
Query: 382 AGRKWRCNLCTLLNDVPGEYFCGIDGSGRRYDADQRPELSKGTVEFVAPTEYMVRPPMPP 441
+GRKWRCN+C++LNDVPGEYF +D +GRR D DQRPEL+KG+VE +APTEYMVRPPMPP
Sbjct: 387 SGRKWRCNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPP 446
Query: 442 SYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQIGFLTFDSTLHFHNFKSSLSQ 501
YFFLIDVS+SA +SG+LEVVA+TIKSCLD+LPG+PRTQIGF+T+DSTLHF+N KSSLSQ
Sbjct: 447 IYFFLIDVSISATKSGMLEVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQ 506
Query: 502 PQMMXXXXXXXXXXXXXXXXXXXXXXSRHVVDSFLDSLPNMFQDNVNVESALGPALKAAF 561
PQMM SR VVD+FLDSLP MFQDN NVESA GPAL+AAF
Sbjct: 507 PQMMVVSDLDDIFVPLPDDLLVNLSESRTVVDAFLDSLPLMFQDNFNVESAFGPALRAAF 566
Query: 562 MVMSQIGGKLLVFQSTLPSLGVGRLRLRGDDVRAYGTDKEHSLRVPEDPFYKQMAAEFTK 621
MVM+Q+GGKLL+FQ++LPSLG GRL+LRGDD R YGTDKE++LRV EDPFYKQMAA+ TK
Sbjct: 567 MVMNQLGGKLLIFQNSLPSLGAGRLKLRGDDPRVYGTDKEYALRVAEDPFYKQMAADCTK 626
Query: 622 NQIAVDIFSFSDKYCDIASLGSLAKYTGGQVYHYPSFQAVTHGDKLKHELSRDLTRETAW 681
QI +++++FSDKY DIASLG+LAKYTGGQVY+YP FQ+ HGDKL+HEL+RDLTRETAW
Sbjct: 627 FQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSVHGDKLRHELARDLTRETAW 686
Query: 682 ESVMRIRCGKGVRFTTYHGHFMLRSTDLLALPAVDSDKAFAMQLSLEETLMTTQTVYFQV 741
E+VMRIRCGKG+RF++YHG+FMLRSTDLLALPAVD DKA+AMQLSLEETL+T+QTVYFQV
Sbjct: 687 EAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQV 746
Query: 742 ALLYTSSSGERRIRVHTAAAPVVTDLGEMYRQADTGAIVSLLSRIAVENSLSDKLDSVRQ 801
ALLYT+S GERRIRVHT+ APVVTDLGEMYRQADTG+IVSL +R+A+E SLS KLD R
Sbjct: 747 ALLYTASCGERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDARN 806
Query: 802 QLQLKLVRSLKEYRNLYVVQHRIGGRLIYPESLRFLPLYILSICKSLALRGGYADVSLDE 861
+Q K+V++LKEYRNL+ VQHR+G RL+YPESL+FLPLY L+I KS L GG AD SLDE
Sbjct: 807 AIQQKIVKALKEYRNLHAVQHRLGSRLVYPESLKFLPLYGLAITKSTPLLGGPADTSLDE 866
Query: 862 RCAAGFSMMILPAKKLLNFIYPSLYRVDEVL---SMEPDRIGGSLKRLPLTMQCXXXXXX 918
RCAAGF+MM LP KKLL +YP+L+RVDE L S D L+RLPL +
Sbjct: 867 RCAAGFTMMALPVKKLLKLLYPNLFRVDEWLLKPSAAHDDFKDVLRRLPLAAESLDSRGL 926
Query: 919 XXXXXXXXXXVWLGRMLPPELVNNILGVSLANFPDLSKVQLRECDNEYSRNFMKILGTLR 978
+W GRML P++ N+LGV A DLS+V +E +N S+ M+++ LR
Sbjct: 927 YIYDDGFRLVLWFGRMLSPDIAKNLLGVDFAA--DLSRVTFQEQENGMSKKLMRLVKKLR 984
Query: 979 ERDPSYHQLCRVVRQGEQPREGFLLLSNLVEDQMSGTSSYMDWILQIHRQTQ 1030
E DPSYH +C +VRQGEQPREGFLLL NL+EDQM G+S Y+DWILQ+HRQ Q
Sbjct: 985 ESDPSYHPMCFLVRQGEQPREGFLLLRNLIEDQMGGSSGYVDWILQLHRQVQ 1036
>AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097
Length = 1096
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/726 (36%), Positives = 396/726 (54%), Gaps = 15/726 (2%)
Query: 311 NCHPRYFRLTTHAIPASQSLVSRWHLPLGAVVHPLAESPDGEVP--VINFGSAGVIRCRR 368
N PRY R T + IP + L+S + L +V P+A S E P V++FG +G +RC R
Sbjct: 376 NSSPRYMRCTINQIPCTVDLLSTSGMQLALIVQPMALSHPSEEPIQVVDFGESGPVRCSR 435
Query: 369 CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGIDGSGRRYDADQRPELSKGTVEFV 428
C+ Y+NP+ F D GRK+ CNLC ++ P +Y C + GRR DAD+RPEL +GTV+FV
Sbjct: 436 CKGYVNPFMKFIDQGRKFICNLCGYTDETPRDYQCNLGPDGRRRDADERPELCRGTVDFV 495
Query: 429 APTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQIGFLTFDS 488
A EYMVR PMP YFFLIDVS++A+++G I+ L DLP PRT +G TFDS
Sbjct: 496 ATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAIQQVLSDLPEGPRTFVGIATFDS 555
Query: 489 TLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXSRHVVDSFLDSLPNMFQDNVN 548
T+HF+N K +L QP M+ R ++ L+S+P MFQ++ +
Sbjct: 556 TIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLSECRQHLEILLESIPTMFQESKS 615
Query: 549 VESALGPALKAAFMVMSQIGGKLLVFQSTLPSLGVGRLRLRGDDVRAY---GTDKEHSLR 605
ESA G A+KAAF+ M GGKL+VFQS LPS+G+G L R D RA G + H L
Sbjct: 616 PESAFGAAVKAAFLAMKSTGGKLMVFQSVLPSVGIGALSSREADGRANASAGEKEAHKLL 675
Query: 606 VPEDPFYKQMAAEFTKNQIAVDIFSFSDKYCDIASLGSLAKYTGGQVYHYPSFQAVTHGD 665
P D + MA EF + Q+ VD+F + Y D+AS+ + + TGGQVY Y F A++
Sbjct: 676 QPADKTLRTMAIEFAEYQVCVDLFITTQAYVDMASISEIPRTTGGQVYCYYPFSALSDPP 735
Query: 666 KLKHELSRDLTRETAWESVMRIRCGKGVRFTTYHGHFMLRSTDLLALPAVDSDKAFAMQL 725
KL ++L ++TR +E+VMR+RC +G++ Y G+F R + LPA+D DKA + L
Sbjct: 736 KLYNDLRWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTL 795
Query: 726 SLEETLMTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVTDLGEMYRQADTGAIVSLLSR 785
++ L FQ ALLYT+ SGERRIRV + P L ++R AD + + + +
Sbjct: 796 KHDDKLQDGAECGFQCALLYTTISGERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLK 855
Query: 786 IAVENSLSDKLDSVRQQLQLKLVRSLKEYRNLYVVQHRIGGRLIYPESLRFLPLYILSIC 845
A S L V++Q + L YR + G+LI PE+L+ LPLY L++
Sbjct: 856 QAANEIPSKALPLVKEQATNDCITILHSYRK-FCATVTSTGQLILPEALKLLPLYTLALT 914
Query: 846 KSLALRGGYADVSLDERCAAGFSMMILPAKKLLNFIYPSLYRVDEVLSMEPDRIGGSLKR 905
K + LR D +D+R + L + +YP + V + L +
Sbjct: 915 KGVGLR---MDGRIDDRSFWINHVSSLSTPLAIPLVYPRMIAVHD-LDANDNEENVVPCP 970
Query: 906 LPLTMQCXXXXXXXXXXXXXXXXVWLGRMLPPELVNNILGV-SLANFPDLSKVQLRECDN 964
+PL + +++G + +++ + V S A P S+ L++ DN
Sbjct: 971 IPLQSEHLSDEGVYFLENGEDGLIYIGESVNSDILQKLFNVRSAAELP--SQYVLQKYDN 1028
Query: 965 EYSRNFMKILGTLRERDPSYHQLCRVVRQGEQPREGFLLLSNLVEDQMSGTSSYMDWILQ 1024
+ S+ F ++ +R + SY ++ ++ ++G+ P L S +VED+ SG +SY+D+++
Sbjct: 1029 QLSKKFNDVVNEIRRQRSSYLRI-KLCKKGD-PAGNMLFQSYMVEDRGSGGASYVDFLVS 1086
Query: 1025 IHRQTQ 1030
+HRQ Q
Sbjct: 1087 VHRQIQ 1092
>AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081
Length = 1080
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 265/727 (36%), Positives = 389/727 (53%), Gaps = 30/727 (4%)
Query: 311 NCHPRYFRLTTHAIPASQSLVSRWHLPLGAVVHPLAESPDGEVP--VINFGSAGVIRCRR 368
NC PRY R T + IP + L+S + L +V PLA S E P V++FG G +RC R
Sbjct: 373 NCSPRYMRCTINQIPCTVDLLSTSGMQLALMVQPLALSHPSEEPIQVVDFGEGGPVRCSR 432
Query: 369 CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGIDGSGRRYDADQRPELSKGTVEFV 428
C+ YINP+ F D GRK+ CN C ++ P +Y C + GRR D D+RPEL +GTVEFV
Sbjct: 433 CKGYINPFMKFIDQGRKFICNFCGYTDETPRDYHCNLGPDGRRRDVDERPELCRGTVEFV 492
Query: 429 APTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQIGFLTFDS 488
A EYMVR PMP YFFLIDVS++A+++G I+ L DLP PRT +G TFDS
Sbjct: 493 ATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEGPRTFVGIATFDS 552
Query: 489 TLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXSRHVVDSFLDSLPNMFQDNVN 548
T+HF+N K +L QP M+ R ++ LDS+P MFQ++
Sbjct: 553 TIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVVQLSECRQHLELLLDSIPTMFQESKI 612
Query: 549 VESALGPALKAAFMVMSQIGGKLLVFQSTLPSLGVGRLRLRGDDVRAY---GTDKEHSLR 605
ESA G A+KAAF+ M GGKL+VFQS L S+GVG L R + RA G + H L
Sbjct: 613 PESAFGAAVKAAFLAMKSKGGKLMVFQSILCSVGVGALSSREAEGRANMSAGEKEAHKLL 672
Query: 606 VPEDPFYKQMAAEFTKNQIAVDIFSFSDKYCDIASLGSLAKYTGGQVYHYPSFQAVTHGD 665
P D K MA EF + Q+ VDIF + Y D+AS+ + + TGGQVY Y F A++
Sbjct: 673 QPADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFSALSDPP 732
Query: 666 KLKHELSRDLTRETAWESVMRIRCGKGVRFTTYHGHFMLRSTDLLALPAVDSDKAFAMQL 725
KL ++L ++TR +E+VMR+RC +G++ Y G+F R + LPA D
Sbjct: 733 KLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPAHD--------- 783
Query: 726 SLEETLMTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVTDLGEMYRQADTGAIVSLLSR 785
+ L FQ ALLYT+ GERRIRV T + L ++R AD + + + +
Sbjct: 784 ---DKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLK 840
Query: 786 IAVENSLSDKLDSVRQQLQLKLVRSLKEYRNLYVVQHRIGGRLIYPESLRFLPLYILSIC 845
A S L V++Q + +L YR + G+LI PE+L+ PLY L++
Sbjct: 841 QAANEIPSKALPLVKEQATNSCINALYAYRK-FCATVTSSGQLILPEALKLFPLYTLALT 899
Query: 846 KSLALRGGYADVSLDERCAAGFSMMILPAKKLLNFIYPSLYRVDEVLSMEPDRIGGSL-K 904
KS+ LR D +D+R + L + +YP + V + L ++ D G L
Sbjct: 900 KSVGLR---TDGRIDDRSFWINYVSSLSTPLAIPLVYPRMISVHD-LDVK-DTEGSVLPP 954
Query: 905 RLPLTMQCXXXXXXXXXXXXXXXXVWLGRMLPPELVNNILGV-SLANFPDLSKVQLRECD 963
+PL+ + +++G + +++ + V S A P+ + L++ D
Sbjct: 955 PIPLSGEHISNEGVYFLENGEDGLLFVGESVDSDILQKLFAVSSAAEIPN--QFVLQQYD 1012
Query: 964 NEYSRNFMKILGTLRERDPSYHQLCRVVRQGEQPREGFLLLSNLVEDQMSGTSSYMDWIL 1023
N+ S+ F + +R + SY ++ ++ ++GE G L LS +VED+ + SY+++++
Sbjct: 1013 NQLSKKFNDAVNEIRRQRCSYLRI-KLCKKGEP--SGMLFLSYMVEDRTASGPSYVEFLV 1069
Query: 1024 QIHRQTQ 1030
Q+HRQ Q
Sbjct: 1070 QVHRQIQ 1076
>AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746
Length = 745
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 155/377 (41%), Gaps = 47/377 (12%)
Query: 552 ALGPALKAAFMVM-SQIG-----GKLLVFQSTLPSLGVGRLRLR--GDDVRAYGTDKEHS 603
G A++A F + S+ G ++ F S P G G+L G+ + D + +
Sbjct: 247 GFGTAMEALFNYLGSEFGNTFALARVFAFLSGPPDYGRGQLDTSRYGEQYASKRVDADRA 306
Query: 604 LRVPEDPFYKQMAAEFTKNQIAVDIFSFSDKYCDIASLGSLAKYTGGQVYHYPSFQAVTH 663
L + PFYK +A ++ + VD+F+ +++Y D+ASL L+ +GG ++ Y S T
Sbjct: 307 LLPEQTPFYKDLATIAVQSGVCVDLFAVTNEYTDLASLKFLSIESGGSLFLYSS----TD 362
Query: 664 GDKLKHELSRDLTRETAWESVMRIRCGKGVRFTTYHGHFM--LRSTDLLALPAVDSDKAF 721
L ++ R L R A+ V+R+R + GHF + +L + DS +
Sbjct: 363 DSTLPQDMFRMLNRPYAFNCVLRLRTSTEFKPGNSFGHFFPDPQYENLQHIICCDSYATY 422
Query: 722 AMQLSLEETL----MTTQTVYFQVALLYT-------------------SSSGERRIRVHT 758
A + + + Q+A YT + +RR+R+ T
Sbjct: 423 AYDFEFADNTGFSRHSGEQPVVQIAFQYTVVVPPEGLSNSEMSSSSRGKHTLQRRLRIRT 482
Query: 759 AAAPVVTDLGEMYRQADTGAIVSLLSRIAVENSLSDKLDSVRQQLQLKLVRSLKEYRNLY 818
++ E+Y D ++SLL + SL D + R L LV +Y + +
Sbjct: 483 MQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLEDGVREGRALLHDWLVILTAQYNDAF 542
Query: 819 -VVQHRIGGRLIYPE---------SLRFLPLYILSICKSLALRGGYADVSLDERCAAGFS 868
+VQ++ G + + + L LP + ++ ++ LR V D R
Sbjct: 543 NLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFALLRNPLLRFHEEGVHPDYRIYLQCL 602
Query: 869 MMILPAKKLLNFIYPSL 885
+L L IYP+L
Sbjct: 603 FSVLDPSSLHCGIYPAL 619
>AT3G23660.2 | chr3:8513666-8517729 REVERSE LENGTH=792
Length = 791
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 318 RLTTHAIPASQSLVSRWHLPLGAVVHPLAESPDGEVPVINFGSAGVIRCRRCRTYINPYA 377
R+T + P S++ S+ +PL A + P+ D +P + + +RCR C +N YA
Sbjct: 16 RMTWNVWPHSKAEASKCVIPLAACISPIRRHAD--IPTLPYAP---LRCRTCSAALNAYA 70
Query: 378 TFADAGRKWRCNLCTLLNDVPGEYFCGIDGS--GRRYDADQRPELSKGTVEF-----VAP 430
+ W C C N P Y + + G Y P+ + TVE+ VA
Sbjct: 71 QVDFTAKLWICPFCYQRNHFPPHYHVISETNLPGELY-----PQYT--TVEYTLPPPVAN 123
Query: 431 TEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQIGFLTFDSTL 490
E +V PP+ + F++D + L+ +K + LP +GF++F +
Sbjct: 124 GEGLVDPPV---FVFVLDTCMIEEE---LDFAKSALKQAIGLLP--ENALVGFVSFGTQA 175
Query: 491 HFHNF 495
H H
Sbjct: 176 HVHEL 180
>AT2G21630.1 | chr2:9250346-9253829 FORWARD LENGTH=762
Length = 761
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 364 IRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGIDGSGRRYDADQRPEL--S 421
+RCR CR+ +NPY+ + W C C N P Y D + PEL
Sbjct: 58 LRCRTCRSVLNPYSVVDFSACNWGCPFCFNRNPFPLNY-------SSVADNNLPPELFPH 110
Query: 422 KGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQI 481
TVE++ + P PP + F++D + + S L+ + ++ LD LP + +
Sbjct: 111 STTVEYLCDS---FSSPSPPVFLFVVD---TCLISEELDFLKSSLFQALDLLPD--TSIL 162
Query: 482 GFLTFDSTLHFHNF 495
G +TFDS + +
Sbjct: 163 GLITFDSLVRVYEL 176
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,038,461
Number of extensions: 909114
Number of successful extensions: 9124
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 8325
Number of HSP's successfully gapped: 75
Length of query: 1031
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 922
Effective length of database: 8,118,225
Effective search space: 7485003450
Effective search space used: 7485003450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)