BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0857900 Os03g0857900|AK071705
(246 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 234 4e-62
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 231 3e-61
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 229 8e-61
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 224 3e-59
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 224 3e-59
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 199 1e-51
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 190 7e-49
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 189 8e-49
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 138 2e-33
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 234 bits (596), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 30 SRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXXX 89
S+F R+CVFCGSS GKK+SY R ID S+A
Sbjct: 11 SKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGGR 70
Query: 90 XXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLEVI 149
P ++PREL GET+GEVRAV MHQRKAEMAR SDAFIALPGGYGTLEELLEVI
Sbjct: 71 HVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVI 130
Query: 150 TWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKLEE 209
TWAQL IH KPVGLLNVDGYY+SLL+FIDKAV EGF+S AR+II++APTA +L+ KLEE
Sbjct: 131 TWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLEE 190
Query: 210 YVPPPHDATALKLTWEMSTV 229
Y P H++ A KL WE+ +
Sbjct: 191 Y-SPCHESVATKLCWEIERI 209
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 231 bits (589), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 134/198 (67%), Gaps = 1/198 (0%)
Query: 28 TASRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXX 87
T SRF+R+CVFCGSS GKK SY ER ID S+A
Sbjct: 4 TKSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHG 63
Query: 88 XXXXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLE 147
P ++PRE+ GET+GEV+AV MHQRKAEMAR++DAFIALPGGYGTLEELLE
Sbjct: 64 GRHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLE 123
Query: 148 VITWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKL 207
VITWAQL IH KPVGLLNVDGYY+SLL FIDKAV EGF+SP ARRIIV+AP A +L+ +L
Sbjct: 124 VITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQL 183
Query: 208 EEYVPPPHDATALKLTWE 225
EEY P D KL W+
Sbjct: 184 EEY-EPEFDEITSKLVWD 200
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Query: 30 SRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXXX 89
S+F+R+CVFCGSS G K SY R ID S+A
Sbjct: 5 SKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGR 64
Query: 90 XXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLEVI 149
P ++PRE+ GET+GEV+AV MHQRKAEMA+ SDAFIALPGGYGTLEELLEVI
Sbjct: 65 HVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVI 124
Query: 150 TWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKLEE 209
TWAQL IH KPVGLLNV+GYY+SLL+FIDKAV EGF+SP AR IIV+AP+A +L+ KLE+
Sbjct: 125 TWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLED 184
Query: 210 YVPPPHDATALKLTWEMSTV 229
YV P H+ A K +WEM +
Sbjct: 185 YV-PRHEKVASKKSWEMEQI 203
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 130/201 (64%), Gaps = 1/201 (0%)
Query: 28 TASRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXX 87
T SRFRR+CVFCGSS G K +Y ER ID S+A
Sbjct: 4 TKSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDG 63
Query: 88 XXXXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLE 147
P + PRE+ GE++GEV V +MHQRKAEM R++DAFIALPGGYGT EELLE
Sbjct: 64 GRHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLE 123
Query: 148 VITWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKL 207
VITW+QL IH KPVGLLNVDG+YDSLL FIDKAV EGFVS ARRIIV+AP A LL L
Sbjct: 124 VITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLL 183
Query: 208 EEYVPPPHDATALKLTWEMST 228
EEYV P HD K+ W+ +T
Sbjct: 184 EEYV-PKHDDFVSKMVWDNTT 203
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 136/224 (60%), Gaps = 25/224 (11%)
Query: 30 SRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXXX 89
S+FRR+CVFCGSS GKK+SY R ID S+A
Sbjct: 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGR 70
Query: 90 XXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALP------------- 136
P ++PREL GET+GEVRAV MHQRKAEMA+ SDAFIALP
Sbjct: 71 HVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNMLS 130
Query: 137 -----------GGYGTLEELLEVITWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGF 185
GYGTLEELLEVITWAQL IH KPVGLLNVDGYY+SLL+FIDKAV EGF
Sbjct: 131 WSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGF 190
Query: 186 VSPPARRIIVAAPTASDLLCKLEEYVPPPHDATALKLTWEMSTV 229
+SP AR IIV+APTA +L+ KLEEY P H+ A KL WEM +
Sbjct: 191 ISPTAREIIVSAPTAKELVKKLEEY-APCHERVATKLCWEMERI 233
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 199 bits (505), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 30 SRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXXX 89
SRF+RVCVFCGSS GK+ Y R ++ S+A
Sbjct: 6 SRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAGG 65
Query: 90 XXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLEVI 149
P ++ +E+ GET GEV AV MH+RKAEMAR SD FIALPGGYGTLEELLEVI
Sbjct: 66 HVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVI 125
Query: 150 TWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKLEE 209
WAQL IH KPVGLLNVDGYY+ LL FIDKAV +GF+ P R I V+AP A +L+ KLE
Sbjct: 126 AWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLEA 185
Query: 210 YVPPPHDATALKLTWEM 226
Y P +D K WE+
Sbjct: 186 Y-KPVNDGVIAKSRWEV 201
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 30 SRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXXX 89
SRFR++CVFCGS G + + +R ID SR
Sbjct: 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL 66
Query: 90 XXXXXXPNGVLPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPGGYGTLEELLEVI 149
P ++P E+ GET+G+VR V MH+RKA MA+E++AFIALPGGYGT+EELLE+I
Sbjct: 67 HVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMI 126
Query: 150 TWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKLEE 209
TW+QL IH K VGLLNVDGYY++LLA D V EGF+ P AR I+V+APTA +L+ K+EE
Sbjct: 127 TWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEE 186
Query: 210 YVPPPHDATALKLTWEMSTVSE 231
Y P H A +W++ + +
Sbjct: 187 YT-PSHMHVASHESWKVEELGD 207
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 114/191 (59%), Gaps = 11/191 (5%)
Query: 29 ASRFRRVCVFCGSSPGKKASYXXXXXXXXXXXXERGIDXXXXXXXXXXXXXXSRAXXXXX 88
+SRF+ +CVFCGSS G KASY R ID S+A
Sbjct: 15 SSRFKSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGG 74
Query: 89 XXXXXXXPNGV-----------LPRELIGETLGEVRAVGSMHQRKAEMARESDAFIALPG 137
N +L GET+GEV+ V MHQRKA MA+ SDAFI LPG
Sbjct: 75 RHNNNNNGNDDALFCHSVNVSQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITLPG 134
Query: 138 GYGTLEELLEVITWAQLRIHHKPVGLLNVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAA 197
GYGTLEELLEVITWAQL IH KPVGLLNVDGYYD+LL FIDKAV EGF+ P AR IIV+A
Sbjct: 135 GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIVSA 194
Query: 198 PTASDLLCKLE 208
PTA +L KLE
Sbjct: 195 PTARELFIKLE 205
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 106 GETLGEVRAVGSMHQRKAEMARESDAFIALPGG-YGTLEELLEVITWAQLRIHHKPVGLL 164
GET+GEVR V MH+RKA MA+E+ AFIAL G Y T+EELLE+ITWAQL IH K VGLL
Sbjct: 8 GETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKTVGLL 67
Query: 165 NVDGYYDSLLAFIDKAVHEGFVSPPARRIIVAAPTASDLLCKLEEYVPPPHDATALKLTW 224
NVDGYY++LLAF D V EGF+ A I+V+AP+A +L+ K+E Y P H A +W
Sbjct: 68 NVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYT-PSHKYIASHQSW 126
Query: 225 EM 226
++
Sbjct: 127 KV 128
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,565,039
Number of extensions: 168151
Number of successful extensions: 326
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 9
Length of query: 246
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 150
Effective length of database: 8,474,633
Effective search space: 1271194950
Effective search space used: 1271194950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)