BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0856900 Os03g0856900|Os03g0856900
(1233 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786 163 5e-40
AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720 154 3e-37
AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751 154 3e-37
AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341 106 6e-23
AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668 94 4e-19
AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510 86 1e-16
AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479 82 1e-15
AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697 59 2e-08
AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667 56 1e-07
AT1G50770.1 | chr1:18818559-18820503 REVERSE LENGTH=633 51 5e-06
>AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786
Length = 785
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 158/608 (25%), Positives = 259/608 (42%), Gaps = 41/608 (6%)
Query: 143 KLVGRNPEITQFE-DLTRSGLAIADGDTQYDGAFEPMCDEPRKGLEFRSMDDLKIWLQSY 201
++VG+ + TQ E T SG T G + D R GL F+ + ++K +
Sbjct: 141 QVVGKRQKSTQQEVGDTNSGSGSGSTPTLVSGLWLEG-DTMRVGLCFKDLAEMKKAVDWC 199
Query: 202 SIRVHRPYHVKESNASVKYTVACLDRHCKWQINA-RKSGGDRWRVTRVGEDHTCCSAEVT 260
SI+ + ++E+ V Y V C HCKW I A R+ + +T H C
Sbjct: 200 SIKRRQKCLLRETEKDV-YVVECERWHCKWSICASRREEDGLFEITECSGPHDC-----Y 253
Query: 261 GKHLQ-LTSRFIGNRLQAFVRAEPTLSPAAIVEAVEQIWHY-------RPTYGKAWRAKQ 312
+HL + I +++ VR +PTLS A + + E+ + + + G AK
Sbjct: 254 PEHLNDFDAECIPFQIERVVRVQPTLSTAELDKWWEKKFGFALDQVVEHCSEGLVEDAKV 313
Query: 313 VAMKVIWGDWDEAYVRLPTLMRAIKAKNPTMHFRIEAHPEKSRMVDGVQRRVFGRAYWIF 372
A+K +GDWD+++ +P LM + + N + + + + F +W F
Sbjct: 314 KAIKRFFGDWDQSFRLIPKLMSVLHSSNGLL-----VDWQYDSLTHDPEHASFRGLFWAF 368
Query: 373 GQSIEAFKHLRPVLAIDGTFLTGKYQGTLLTAIGVDAGLHLVPLAFALVEKENTSNWEWF 432
QSI+ F+H RP++ +D L GKY+ L+ A DA PLAFA+ ++ + +W WF
Sbjct: 369 SQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWF 428
Query: 433 INMLRNKLIGPNREVCIISDRHPGILNSIIHIMPHHLT--IHHRWCMRHFCANFYTAGAT 490
+ +R K + + +C+IS P IL I +HR+C+ H C+ +
Sbjct: 429 LTRIREK-VTQRQGICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPG 487
Query: 491 TDQMKDLERICQINEKALFLDEIKRLMGVVGER-PK--KWLEDHMPLKVKWARAFDTNGR 547
D ++ + + +E M + ER P+ KWL+ P +WA A D +GR
Sbjct: 488 FDY--NMHFLVDEAGSSSQKEEFDSYMKEIKERNPEAWKWLDQFPPH--QWALAHD-DGR 542
Query: 548 RHSIMTSNMAESFNNVLRGIRKLPVTAIVAYTFSKCNSWFVDRHKEATVDILCGKKWPTK 607
R+ IM + E+ V + RK+ + V F + F + K + + G +
Sbjct: 543 RYGIMRID-TEALFAVCKRFRKVAMAGGVMLLFGQLKDAFAESFKLSRGSLKHGDVYTEH 601
Query: 608 VKDILEEQQRRTLGQRAACFDFPSMKYEVS--EQGGVTAAGVQWGGRHYVVVARDNTCSC 665
V + LEE + + Y+VS + G +V D TC+C
Sbjct: 602 VMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTC 661
Query: 666 QFPQLHHLPCSHMITVCKLRGLDVEVAPRMCYEASNKAVQDSYSPRFEPYLDPSQWPSYD 725
Q + PC H + VC ++ CY +YS +F P + S WP
Sbjct: 662 GEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVER--YHKTYSAKFSPVPELSAWPEAY 719
Query: 726 GEFFVPDL 733
G VP L
Sbjct: 720 G---VPTL 724
>AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720
Length = 719
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 240/553 (43%), Gaps = 55/553 (9%)
Query: 185 GLEFRSMDDLKIWLQSYSIRVHRPYHVKESNASVKYTVACLDRHCKWQINA-RKSGGDRW 243
GL F+ D+LK + + IR R V+E+ + YT C+ CKW + A R
Sbjct: 188 GLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEM-YTFECVRWKCKWSLRAARMEEHGLV 246
Query: 244 RVTRVGEDHTCCSAEVTGKHLQLTSRFIGNRLQAFVRAEPTLSPAAIVEAVEQIWHYRPT 303
+T+ HTC S E S F + ++ VR +PTLS A + + ++ Y
Sbjct: 247 EITKYTGPHTC-SHEYPN---DFESEFAADEIERVVRIQPTLSIAELKKWWKEKTGYELQ 302
Query: 304 YGKAWRAKQVAMKVIWGDWDEAYVRLPTLMRAIKAKNPTM---HFRIEAHPEKSRMVDGV 360
K K +K ++GD D+++ +P L+ A + N + + + +P+ +
Sbjct: 303 TSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSNGLLVDWQYDLFPNPDFAS----- 357
Query: 361 QRRVFGRAYWIFGQSIEAFKHLRPVLAIDGTFLTGKYQGTLLTAIGVDAGLHLVPLAFAL 420
F +W F QSIE F+H RP++ +D L GKYQ L+ A GVDA PLAFA+
Sbjct: 358 ----FRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAV 413
Query: 421 VEKENTSNWEWFINMLRNKLIGPNREVCIISDRHPGILNSIIHIMPHHLTI------HHR 474
++ +T +W WF +R K + +++C+IS L I+ ++ ++ HH+
Sbjct: 414 TKEVSTDSWRWFFTKIREK-VTQRKDLCLISSP----LRDIVAVVNEPGSLWQEPWAHHK 468
Query: 475 WCMRHFCANFYTAGATTDQMKDLERICQINEKALFLDEIKRLMGVVGER-PK--KWLEDH 531
+C+ H + F + +E+ N+K +E M + E+ P+ KWL D
Sbjct: 469 FCLNHLRSQFLGVFRDYNLESLVEQAGSTNQK----EEFDSYMNDIKEKNPEAWKWL-DQ 523
Query: 532 MPLKVKWARAFDTNGRRHSIMTSNMAESFNNVLRGIRKLPV--TAIVAYTFSKCNSWFVD 589
+P + KWA A D+ G R+ I+ + E+ V RG V T V F + S F
Sbjct: 524 IP-RHKWALAHDS-GLRYGIIEID-REALFAVCRGFPYCTVAMTGGVMLMFDELRSSFDK 580
Query: 590 RHKEATVDILCGKKWPTKVKDILEEQQRRTLGQRAACFDFPSMKYEVSEQGGVTAAGVQW 649
+ G + D LEE ++ + S K S +
Sbjct: 581 SLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSE---------- 630
Query: 650 GGRHYVVVARDNTCSCQFPQLHHLPCSHMITVCKLRGLDVEVAPRMCYEASNKAVQDSYS 709
++V +TC+C+ Q + PC H + V + ++ CY +Y+
Sbjct: 631 -KEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYC--KTYA 687
Query: 710 PRFEPYLDPSQWP 722
F P D + WP
Sbjct: 688 ATFSPVPDVAAWP 700
>AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751
Length = 750
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 238/553 (43%), Gaps = 41/553 (7%)
Query: 183 RKGLEFRSMDDLKIWLQSYSIRVHRPYHVKESNASVKYTVACLDRHCKWQINA-RKSGGD 241
R GL F+ D+LK + S++ + V+E+ A +Y C+ CKW + A R
Sbjct: 193 RVGLCFKDGDELKKAVDWCSLKAQQKCVVRET-AKDEYIFECIRWKCKWSLGAARMKKHG 251
Query: 242 RWRVTRVGEDHTCCSAEVTGKHLQLTSRFIGNRLQAFVRAEPTLSPAAIVEAVEQIWHYR 301
+ + HTC + + + S F + ++ VR PT + + + + ++ Y
Sbjct: 252 LVEIIKYTGPHTC--HPIVPEDFK--SEFETDEIERAVRYMPTQTISELKKWWKKKIGYE 307
Query: 302 PTYGKAWRAKQVAMKVIWGDWDEAYVRLPTLMRAIKAKNPTM-HFRIEAHPEKSRMVDGV 360
AK+ A+K ++GDWD+++ P LM A+ + N + ++ + P +
Sbjct: 308 LETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSNGLLVDWKYDLFPNPNFAS--- 364
Query: 361 QRRVFGRAYWIFGQSIEAFKHLRPVLAIDGTFLTGKYQGTLLTAIGVDAGLHLVPLAFAL 420
F +W F QSIE F+H RP++ +D L +YQ L+ A GVDA PLAFA+
Sbjct: 365 ----FCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAV 420
Query: 421 VEKENTSNWEWFINMLRNKLIGPNREVCIISDRHPGILNSIIHIMPHHLT--IHHRWCMR 478
++ +T W WF+ +R K + + +C+IS HP I+ + +HR+ +
Sbjct: 421 TKEVSTDIWRWFLTGIREK-VTQRKGLCLISSPHPDIIAVVNESGSQWQEPWAYHRFSLN 479
Query: 479 HFCANFYTAGATTDQMKDLERICQINEKALFLDEIKRLMGVVGER---PKKWLEDHMPLK 535
HF + F + + R ++K DE M + E+ +KWL D P +
Sbjct: 480 HFYSQFSRVFPSFCLGARIRRAGSTSQK----DEFVSYMNDIKEKNPEARKWL-DQFP-Q 533
Query: 536 VKWARAFDTNGRRHSIMTSNMAESFNNVLRGIRKLP--VTAIVAYTFSKCNSWFVDRHKE 593
+WA A D NGRR+ IM N F V + VT V F + S F
Sbjct: 534 NRWALAHD-NGRRYGIMEINTKALF-AVCNAFEQAGHVVTGSVLLLFDELRSKFDKSFSC 591
Query: 594 ATVDILCGKKWPTKVKDILEEQQRRTLGQRAACFDFPSMKYEVSEQGGVTAAGVQWGGRH 653
+ + CG + V D LEE R + + + A + G
Sbjct: 592 SRSSLNCGDVYTEPVMDKLEE-------FRTTFVTYSYIVTPLDNNAFQVATALDKG--E 642
Query: 654 YVVVARDNTCSCQFPQLHHLPCSHMITVCKLRGLDVEVAPRMCYEASNKAVQDSYSPRFE 713
+V D +C+C Q + PC H + VCK + CY + + ++ +Y+ F
Sbjct: 643 CIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCY--TLERLKRTYATIFS 700
Query: 714 PYLDPSQWPSYDG 726
+ S WP G
Sbjct: 701 HVPEMSAWPEASG 713
>AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341
Length = 1340
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 862 AALTALVDRWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERVEEY 921
A +TALV+RWRPETHTFHLP GE+TVTL+DV ++LGL + G AVTG T NW + E+
Sbjct: 83 ALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTGSTKY-NWADLCEDL 141
Query: 922 LGLEPPVAPDGQRQTKTSGVPLSWLRANFGQCPAEADEATVQRYCRA 968
LG P G + S V L+WLR NF PA+ DE T++ + RA
Sbjct: 142 LGHRP-----GPKDLHGSHVSLAWLRENFRNLPADPDEVTLKCHTRA 183
>AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668
Length = 667
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 12/170 (7%)
Query: 802 FYEEKHRAPQIASGEHLKTLRVRGHTAHI---LFDDRYVPYLRRAKLLAFVTMAQRPVPL 858
+ +EKH + + G+ LR HT+ + + + + RA F + + P
Sbjct: 16 YDQEKHVSSAVWDGQERGALRCHEHTSKLGEWKLKPKQIELVERA---GFGFLRRIPAIS 72
Query: 859 YNAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERV 918
+ ++ALV+RWR ET+TFH GE+TVTLED+A++LGL I G+ V G T +
Sbjct: 73 LDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDGKPVIGLTYT-TCSAVC 131
Query: 919 EEYLGLEPPVAPDGQRQTKTSGVPLSWLRANFGQCPAEADEATVQRYCRA 968
E YLG P V LSWL+ NF +CP +A V+R RA
Sbjct: 132 ERYLGKSP-----ASNSASGGMVKLSWLKDNFSECPDDASFEEVERRTRA 176
>AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510
Length = 509
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 802 FYEEKHRAPQIASGEHLKTLRVRGHTAHI---LFDDRYVPYLRRAKLLAFVTMAQRPVPL 858
+ ++ H + + G+ LR + HT+ + D + + +A F + P+ L
Sbjct: 14 YEQDLHVSSAVWEGQERGLLRCQEHTSLLHQWKLTDEQINLVDKAGFGYFRKIG--PMSL 71
Query: 859 YNAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGN-WRER 917
N + ++ALV+RWR ET+TFHLP GE+T+TL++VA++LGL I G + G +
Sbjct: 72 -NNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDPIVGSKVGDEVAMDM 130
Query: 918 VEEYLGLEPPVAPDGQRQTKTSGVPLSWLRANFGQCPAEADEATVQRYCRA 968
LG P A ++ S V L+WL+ F +CP +A V+ + RA
Sbjct: 131 CGRLLGKLPSAA---NKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHTRA 178
>AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479
Length = 478
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 802 FYEEKHRAPQIASGEHLKTLRVRGHTA---HILFDDRYVPYLRRAKLLAFVTMAQRPVPL 858
+ ++KH + I +G+ LR + T+ H + + +A F + +
Sbjct: 5 YEQDKHVSSAILTGQERGVLRCQERTSLLHHWKLTKEQIALVEKAGFGWFRLVGSISL-- 62
Query: 859 YNAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERV 918
N + ++ALV+RWR ET+TFH PCGE+T+TL++V++ILGL + G+ V G +V
Sbjct: 63 -NNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDEDPSQV 121
Query: 919 -EEYLGLEPPVAPDGQRQTKTSGVPLSWLRANFGQCPAEADEATVQRYCRA 968
LG P G R V WL+ +F +CP A ++ + RA
Sbjct: 122 CLRLLGKLPKGELSGNR------VTAKWLKESFAECPKGATMKEIEYHTRA 166
>AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697
Length = 696
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 838 PYLRRAKLLAFVTMAQRPVPLYNAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILG 897
P R+A + + + + N + L ALV++W PET +F P GE T+TLEDV ++LG
Sbjct: 74 PIWRKAGIFEAIKASMYKIR-KNQSLLLALVEKWCPETKSFLFPWGEATITLEDVLVLLG 132
Query: 898 LPIRGQAVTGDTASGNWRERVEE 920
++G V S R+ VE+
Sbjct: 133 FSVQGSPVFAPLESSEMRDSVEK 155
>AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667
Length = 666
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 860 NAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERVE 919
N + + +L W PET+TF P GE T+TLEDV ++LG I G +V S +E VE
Sbjct: 112 NPSLILSLAQNWCPETNTFVFPWGEATITLEDVNVLLGFSISGSSVFASLQSSEMKEAVE 171
Query: 920 E 920
+
Sbjct: 172 K 172
>AT1G50770.1 | chr1:18818559-18820503 REVERSE LENGTH=633
Length = 632
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 838 PYLRRAKLLAFVTMAQRPVPLYNAAALTALVDRWRPETHTFHLPCGELTVTLEDVAMILG 897
P R+A + VT + + N + + ++W P+T TF P GE T+TLEDV ++LG
Sbjct: 76 PIWRKAGIFEAVTASTYKIN-PNTELVLGIAEKWCPDTKTFVFPWGETTITLEDVMLLLG 134
Query: 898 LPIRGQAV 905
+ G V
Sbjct: 135 FSVLGSPV 142
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 25,810,830
Number of extensions: 1079625
Number of successful extensions: 2250
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 2233
Number of HSP's successfully gapped: 10
Length of query: 1233
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1123
Effective length of database: 8,090,809
Effective search space: 9085978507
Effective search space used: 9085978507
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 118 (50.1 bits)