BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0850900 Os03g0850900|AK062526
(125 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02850.1 | chr2:826630-827720 REVERSE LENGTH=130 113 2e-26
AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188 74 2e-14
AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201 71 1e-13
AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262 70 2e-13
AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188 70 2e-13
AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207 69 8e-13
AT1G17800.1 | chr1:6128828-6129391 FORWARD LENGTH=141 69 8e-13
AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203 67 3e-12
AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193 65 9e-12
AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107 65 1e-11
AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175 62 1e-10
AT3G53330.1 | chr3:19772930-19773938 FORWARD LENGTH=311 59 5e-10
AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223 59 9e-10
AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182 57 2e-09
AT4G31840.1 | chr4:15401798-15402426 FORWARD LENGTH=178 57 2e-09
AT4G30590.1 | chr4:14935760-14936469 REVERSE LENGTH=191 57 2e-09
AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175 56 4e-09
AT1G45063.1 | chr1:17033335-17034886 REVERSE LENGTH=370 55 6e-09
AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173 54 2e-08
AT2G25060.1 | chr2:10662308-10662930 FORWARD LENGTH=183 53 3e-08
AT3G18590.1 | chr3:6398670-6399337 FORWARD LENGTH=189 50 2e-07
AT5G53870.1 | chr5:21870033-21871228 REVERSE LENGTH=371 50 4e-07
AT3G20570.1 | chr3:7186754-7187453 REVERSE LENGTH=204 50 4e-07
AT5G57920.1 | chr5:23453634-23454256 FORWARD LENGTH=183 49 6e-07
AT2G27035.1 | chr2:11535670-11536251 FORWARD LENGTH=164 48 1e-06
>AT2G02850.1 | chr2:826630-827720 REVERSE LENGTH=130
Length = 129
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 3 GRGSA----MAAXXXXXXXXXXXHGEMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVL 58
GRGSA A + ++A +TVGD G W A W GK F+AGDVL
Sbjct: 4 GRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVL 63
Query: 59 VFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGM 118
VF Y+ H Y C P GAK Y SG DR+TL++G N+FICNFP HC++ M
Sbjct: 64 VFNYNPRMHNVVKVDSGSYNNC-KTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDM 122
Query: 119 KIAVTAA 125
KIAVTA
Sbjct: 123 KIAVTAV 129
>AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188
Length = 187
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 24 EMAESAVFTVGDRGGWGMGAGS----WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKG 79
++E+AV+ VGD GW A WA+ K F GD ++F+Y+ H Y+
Sbjct: 17 RLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQFHNVMRVTHPMYRS 76
Query: 80 CTAAPRGAKVYKSGNDRVTLA-RGTNYFICNFPGHCQAGMKI 120
C + + + +GND +TL G ++F C PGHC AG K+
Sbjct: 77 CNTS-KPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKL 117
>AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201
Length = 200
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 29 AVFTVGDRGGWGMGA---GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
V VGD GW + + +WA+ F+ GD LVFKY+ H Y+ C +
Sbjct: 27 TVHKVGDSDGWTIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTHNDYEMCEPSKP 86
Query: 86 GAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
A+ Y++G+D V L + G +FIC FPGHC G K+ +
Sbjct: 87 LAR-YETGSDIVILTKPGLQHFICGFPGHCDMGQKLQI 123
>AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262
Length = 261
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 32 TVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKV 89
T+G GW +GA +WA G+ F GD LVF Y ++ H + C A +
Sbjct: 27 TIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQAV-KPLIT 85
Query: 90 YKSGNDRVTLA-RGTNYFICNFPGHCQAGMKIAV 122
+ +GN V L G YFIC PGHC GMK+ V
Sbjct: 86 FANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEV 119
>AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188
Length = 187
Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 28 SAVFTVGDRGGWGMGA--GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
+ F VGD GW +G SW + K F+ GD L FKY S H Y GC + R
Sbjct: 23 AVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPS-HSVAVVNKADYDGCETS-R 80
Query: 86 GAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
+ + G+ ++ L + G +F+C PGHC GMK+AV
Sbjct: 81 PTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAV 118
>AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207
Length = 206
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 29 AVFTVGDRGGWGMGAG---SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
V VG+ GW M G +WA+ + F+ GD LVF Y+ H ++ C ++ +
Sbjct: 27 TVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCESS-K 85
Query: 86 GAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
+ YK+G+D ++L + G +FIC PGHC+ G K+ +
Sbjct: 86 PLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQI 123
>AT1G17800.1 | chr1:6128828-6129391 FORWARD LENGTH=141
Length = 140
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 31 FTVGDRGGWG--MGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK 88
+ VG GW + +WA GK F AGD+L FKYD GY+ C A GA
Sbjct: 41 YIVGGDDGWDPVVPMDTWARGKTFYAGDILEFKYDYQRFNLIVVNRTGYETCEAN-VGAI 99
Query: 89 VYKSGNDRVTLARGTNYFICNF-PGHCQAGMKIAVTA 124
Y SG+D++ L G NYFI + P C G+K+A+ A
Sbjct: 100 EYSSGDDKIQLNYGYNYFIGTYTPEDCTTGLKMAIKA 136
>AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203
Length = 202
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 46 WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLAR-GTN 104
WA GK F+ GD+L FKY SS H GY GC A+ + + G+ ++ L G N
Sbjct: 45 WATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDAS-SSTENHSDGDTKIDLKTVGIN 102
Query: 105 YFICNFPGHCQA--GMKIAV 122
YFIC+ PGHC+ GMK+AV
Sbjct: 103 YFICSTPGHCRTNGGMKLAV 122
>AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193
Length = 192
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 27 ESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAP 84
+ + VGD GW + + SW +GKRF GDVL+F+Y SS H Y+ C
Sbjct: 26 NATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQY-SSTHSVYEVAKDNYQNCNTT- 83
Query: 85 RGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTA 124
+ + +GN V L++ G +F+C HC AGM++ V
Sbjct: 84 DAIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNV 124
>AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107
Length = 106
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 26 AESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
+E VGD GW + +W G+ F GDVLVF Y S H Y C
Sbjct: 4 SEGTEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDC-GL 62
Query: 84 PRGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTAA 125
++ GND + L+ G +FIC HC G K+++ A
Sbjct: 63 DNYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVA 105
>AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175
Length = 174
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 32 TVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKV 89
+G GW SW++ + FK GD +VFKY YK C
Sbjct: 27 VIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVELGSETAYKSCDLGT-SVNS 85
Query: 90 YKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTAA 125
SGND V L++ GT YF C GHC+ GMKI V
Sbjct: 86 LSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVV 122
>AT3G53330.1 | chr3:19772930-19773938 FORWARD LENGTH=311
Length = 310
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 30 VFTVGDRGGWGMGAG----SWANGKRFKAGDVLVFKYDSSAHXXXXXX-XXGYKGCTAAP 84
++ VGD GGW + W+ GK+F D L F+Y+ + ++ C +
Sbjct: 187 IYRVGDYGGWSVYYSYYYYKWSEGKQFHVEDTLFFQYNKELNDVREITDELEFRSCESTS 246
Query: 85 RGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTA 124
A VYK+G+D + L + G +YF+ G CQAG+K+ VT
Sbjct: 247 TVA-VYKTGHDLIKLTKPGVHYFVSLKTGLCQAGIKLRVTV 286
>AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223
Length = 222
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 28 SAVFTVGDRGGW--GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
+A F VGD GW + W GK F+ GD L F Y S H GY C ++
Sbjct: 21 AATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSVSVVDKAGYDNCDSS-G 78
Query: 86 GAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
+ + G+ ++ L GT +F+C GHC+ GMK+AV
Sbjct: 79 ATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAV 116
>AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182
Length = 181
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 39 WGMGA--GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDR 96
W +G S A GK F GD +VF Y + H YK CT SG
Sbjct: 31 WSLGKDYSSLATGKSFAVGDTIVFNY-GAGHTVDEVSESDYKSCTLG-NAISSDSSGTTS 88
Query: 97 VTL-ARGTNYFICNFPGHCQAGMKIAV 122
+ L G +YFIC PGHC GMK++V
Sbjct: 89 IALKTPGPHYFICGIPGHCTGGMKLSV 115
>AT4G31840.1 | chr4:15401798-15402426 FORWARD LENGTH=178
Length = 177
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 34 GDRGGWGMGAGS------WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGC-TAAPRG 86
G G W + S WA RFK GD +VFKY++ Y+ C T +P+
Sbjct: 31 GKSGDWKIPPSSSFSFNEWAQKARFKVGDFIVFKYEAGKDSVLQVTREAYEKCNTTSPKA 90
Query: 87 AKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKI 120
+ Y GN +V L + G YF+ GHCQ G K+
Sbjct: 91 S--YTDGNTKVKLDQAGPVYFVSGTEGHCQKGQKL 123
>AT4G30590.1 | chr4:14935760-14936469 REVERSE LENGTH=191
Length = 190
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 22 HGEMAESAVFTVGDRGGWGMGAGS------WANGKRFKAGDVLVFKYDSSAHXXXXXXXX 75
HG + G G W + WA RFK GD +V+KYD
Sbjct: 20 HGASNPRVILVGGSVGSWKVPDSPNNTLNHWAENNRFKVGDFIVWKYDMKVDSVLQVTKE 79
Query: 76 GYKGCTAAPRGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTA 124
Y+ C A K Y GN +V L + G +FI PG+C G KI +
Sbjct: 80 DYESCNTA-NPLKQYNDGNTKVALDKSGPYFFISGAPGNCAKGEKITLVV 128
>AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175
Length = 174
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 26 AESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
A SA TV W +G GK F GD +VF Y + H YK CT
Sbjct: 18 ASSASLTVN----WSLGTDYTPLTTGKTFSVGDTIVFNY-GAGHTVDEVSENDYKSCTLG 72
Query: 84 PRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTAA 125
G YFIC PGHC AGMK+AVT A
Sbjct: 73 NSITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVA 114
>AT1G45063.1 | chr1:17033335-17034886 REVERSE LENGTH=370
Length = 369
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 30 VFTVGDRGGWGMGAG----SWANGKRFKAGDVLVFKYDSSAHXXXXXX-XXGYKGCTAAP 84
V+ VGD WG+ +W+ K+F GD L+F+Y++ + + C
Sbjct: 148 VYKVGDSKSWGVYDSDFYYNWSKEKQFNVGDGLLFEYNNEVNGVYEISGDLEFLNCDPTS 207
Query: 85 RGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTA 124
A V+K+G+D + L + G +YFI + PGHC AG+K+ V
Sbjct: 208 PIA-VHKTGHDIIKLTKPGIHYFISSEPGHCGAGLKLQVVV 247
>AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173
Length = 172
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 31 FTVGDRGGWG--MGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA-PRGA 87
+TVG+ W + WA GK F GD L F +D + H Y+GC A P
Sbjct: 29 YTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRN 88
Query: 88 KVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAV 122
+G D VTL + +Y++ + G C GMK++V
Sbjct: 89 WTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV 123
>AT2G25060.1 | chr2:10662308-10662930 FORWARD LENGTH=183
Length = 182
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Query: 34 GDRGGWGMGAGS------WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGA 87
G G W + S WA RFK GD +VF+Y+S Y C A
Sbjct: 35 GKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLA 94
Query: 88 KVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTA 124
Y G +V L R G YFI GHC+ G K+++
Sbjct: 95 N-YTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
>AT3G18590.1 | chr3:6398670-6399337 FORWARD LENGTH=189
Length = 188
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 28 SAVFTVGDRGGW--------GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKG 79
S F VG GW G WA+ RFK GD L FKY + YK
Sbjct: 24 STEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGDTLRFKY--TKDSVLVVSEEEYKK 81
Query: 80 CTAAPRGAKVYKSGNDRV-TLAR-GTNYFICNFPGHCQAGMKIAV 122
C A ++Y + D V L R G YFI GHC+ G K+ V
Sbjct: 82 CKATK--PQLYSNNEDTVFKLDRPGLFYFISGVSGHCEKGQKMIV 124
>AT5G53870.1 | chr5:21870033-21871228 REVERSE LENGTH=371
Length = 370
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 31 FTVGDRGGWGMGA----GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRG 86
F VG G W +WA RF+ D L FKY + + GC
Sbjct: 30 FNVGGNGAWVTNPQENYNTWAERNRFQVNDSLYFKYAKGSDSVQQVMKADFDGCNVR-NP 88
Query: 87 AKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
K +++G VTL R G YFI HCQ G K+ V
Sbjct: 89 IKNFENGESVVTLDRSGAFYFISGNQDHCQKGQKLIV 125
>AT3G20570.1 | chr3:7186754-7187453 REVERSE LENGTH=204
Length = 203
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 31 FTVGDRGGWGMGAGS-----WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
FTVG GW + +GS WA RF+ GD L+F Y S+ Y C
Sbjct: 30 FTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFVYQSNQDSVLQVTRDAYDSCNTDSP 89
Query: 86 GAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
AK + G VTL G YFI +C+ K+ V
Sbjct: 90 TAK-FADGKTSVTLNHSGPYYFISGNKDNCKKNEKLVV 126
>AT5G57920.1 | chr5:23453634-23454256 FORWARD LENGTH=183
Length = 182
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 44 GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLAR-G 102
W+ RFK GD L++KY++ Y+ C + + YK G+ + L R G
Sbjct: 43 NQWSGRTRFKIGDSLLWKYNAENDSVLQVRQTDYERCDRS-EPIRGYKDGHTNIELKRSG 101
Query: 103 TNYFICNFPGHCQAGMKIAVTA 124
YFI GHCQ G K+ V
Sbjct: 102 PFYFISGEEGHCQRGEKLRVVV 123
>AT2G27035.1 | chr2:11535670-11536251 FORWARD LENGTH=164
Length = 163
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 26 AESAVFTVGD-RGGWG--MGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA 82
ES++ VG R W + WAN +RF +GD L F ++ + H Y+ C
Sbjct: 23 VESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQCVD 82
Query: 83 APRGAKVYKSGNDRVTLARG-TNYFICNFPGHCQAGMKIAVTA 124
+ + G D L YFIC G+C GMK+A+T
Sbjct: 83 NDYIFNITRGGRDVFQLLEPKPYYFICG-RGYCLKGMKLAITV 124
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,223,843
Number of extensions: 73432
Number of successful extensions: 239
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 25
Length of query: 125
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 39
Effective length of database: 8,748,793
Effective search space: 341202927
Effective search space used: 341202927
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 105 (45.1 bits)