BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0850400 Os03g0850400|AK121930
(482 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13280.1 | chr5:4249516-4252654 FORWARD LENGTH=570 777 0.0
AT3G02020.1 | chr3:340739-343410 REVERSE LENGTH=560 740 0.0
AT5G14060.1 | chr5:4536143-4538993 FORWARD LENGTH=545 736 0.0
AT4G19710.2 | chr4:10725229-10729536 FORWARD LENGTH=917 174 1e-43
AT1G31230.1 | chr1:11158744-11163055 REVERSE LENGTH=912 172 4e-43
>AT5G13280.1 | chr5:4249516-4252654 FORWARD LENGTH=570
Length = 569
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/473 (79%), Positives = 421/473 (89%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSVASAERM+EVADLIL+FPEE+PV+VLSAMGKTTNNLLLAGEKAVSCG ASE
Sbjct: 90 MKFGGSSVASAERMKEVADLILTFPEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASE 149
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
I EL++IKELH+RT+ EL +D S++ KG+AMMKELT RTRDYLVSFGEC+
Sbjct: 150 IEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECL 209
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STRIFAAYLN +G KARQYDAF+IGFITTDDFTN DILEATYPAVAKRL DW+ DPA+P
Sbjct: 210 STRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVP 269
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
IVTGFLGKGWK+ AVTTLGRGGSDLTATTIGKALGL+EIQVWKDVDGVLTCDP I A
Sbjct: 270 IVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRAT 329
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
PVPYLTF+EAAELAYFGAQVLHPQSMRPA+EG+IPVRVKNSYN +APGT+ITKTRD++KS
Sbjct: 330 PVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRDMTKS 389
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
ILTSIVLK N+TMLDI STRMLGQ GFLAKVFSIFE+LGISVD VATSEVSISLTLDPSK
Sbjct: 390 ILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSK 449
Query: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
LW RELIQQELDHVVEELEKIAVV+LL+ R+IISLIGNVQ SSLILE+AF+VL GVNV
Sbjct: 450 LWSRELIQQELDHVVEELEKIAVVNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNV 509
Query: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEEEDLQHNGSPV 473
QMISQGASKVNIS +V+++EA+ C+QALH +FFE+G LSE+ + NGSPV
Sbjct: 510 QMISQGASKVNISFIVNEAEAEGCVQALHKSFFESGDLSELLIQPRLGNGSPV 562
>AT3G02020.1 | chr3:340739-343410 REVERSE LENGTH=560
Length = 559
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/463 (77%), Positives = 399/463 (86%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSVASAERM +VA LILSFP+E PVVVLSAM KTTN LL+AGEKAV CG
Sbjct: 87 MKFGGSSVASAERMIQVAKLILSFPDEKPVVVLSAMAKTTNKLLMAGEKAVCCGVTNVDT 146
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
I EL+ IKELH+RT ELG++ ++++ KGVAMMKELT R+RDYLVSFGECM
Sbjct: 147 IEELSYIKELHIRTAHELGVETAVIAEHLEGLEQLLKGVAMMKELTLRSRDYLVSFGECM 206
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STR+FAAYLNK+G KARQYDAF+IG ITTDDFTNADILEATYPAV+K+L GDW + A+P
Sbjct: 207 STRLFAAYLNKIGHKARQYDAFEIGIITTDDFTNADILEATYPAVSKKLLGDWSKENALP 266
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
+VTGFLGKGW+SCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI A
Sbjct: 267 VVTGFLGKGWRSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYCGAQ 326
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
PVP+LTF+EAAELAYFGAQVLHP SMRPA+EG+IPVRVKNSYN APGTVIT++RD+SK+
Sbjct: 327 PVPHLTFDEAAELAYFGAQVLHPLSMRPAREGNIPVRVKNSYNPTAPGTVITRSRDMSKA 386
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
+LTSIVLK N+TMLDI STRMLGQYGFLAKVFS FE LGISVD VATSEVSISLTLDPSK
Sbjct: 387 VLTSIVLKRNVTMLDITSTRMLGQYGFLAKVFSTFEKLGISVDVVATSEVSISLTLDPSK 446
Query: 361 LWCRELIQQELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGVNV 420
RELIQ ELD VVEELEKIAVV+LL+HRSIISLIGNVQRSS ILEK F VLR NG+NV
Sbjct: 447 FCSRELIQHELDQVVEELEKIAVVNLLRHRSIISLIGNVQRSSFILEKGFRVLRTNGINV 506
Query: 421 QMISQGASKVNISLVVHDSEAKQCIQALHSAFFENGFLSEVEE 463
QMISQGASKVNISL+V+D EA+ C++ALHSAFFE V E
Sbjct: 507 QMISQGASKVNISLIVNDDEAEHCVKALHSAFFETDTCEAVSE 549
>AT5G14060.1 | chr5:4536143-4538993 FORWARD LENGTH=545
Length = 544
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/457 (77%), Positives = 401/457 (87%), Gaps = 2/457 (0%)
Query: 1 MKFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASE 60
MKFGGSSV SAERM+EVA+LILSFP+E PV+VLSAMGKTTN LL AGEKAV+CG
Sbjct: 86 MKFGGSSVESAERMKEVANLILSFPDERPVIVLSAMGKTTNKLLKAGEKAVTCGVTNVES 145
Query: 61 IPELAVIKELHVRTIDELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGECM 120
I EL+ IKELH+RT ELG++ +++ KG++MMKELT RTRDYLVSFGECM
Sbjct: 146 IEELSFIKELHLRTAHELGVETTVIEKHLEGLHQLLKGISMMKELTLRTRDYLVSFGECM 205
Query: 121 STRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPAIP 180
STR+F+AYLNK+G KARQYDAF+IGFITTDDFTNADILEATYPAV+K L GDW + A+P
Sbjct: 206 STRLFSAYLNKIGHKARQYDAFEIGFITTDDFTNADILEATYPAVSKTLVGDWSKENAVP 265
Query: 181 IVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICANAI 240
+VTG+LGKGW+SCA+TTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNI A
Sbjct: 266 VVTGYLGKGWRSCAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYPGAQ 325
Query: 241 PVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDLSKS 300
VPYLTF+EAAELAYFGAQVLHP SMRPA++GDIPVRVKNSYN APGTVIT++RD+SK+
Sbjct: 326 SVPYLTFDEAAELAYFGAQVLHPLSMRPARDGDIPVRVKNSYNPTAPGTVITRSRDMSKA 385
Query: 301 ILTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLDPSK 360
+LTSIVLK N+TMLDI STRMLGQYGFLAKVF+ FEDLGISVD VATSEVSISLTLDP+K
Sbjct: 386 VLTSIVLKRNVTMLDIASTRMLGQYGFLAKVFTTFEDLGISVDVVATSEVSISLTLDPAK 445
Query: 361 LWCRELIQQ--ELDHVVEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVLRRNGV 418
LW RELIQ+ ELD++VEELEKIAVV LLQ RSIISLIGNVQ+SSLILEK F V R NGV
Sbjct: 446 LWGRELIQRVNELDNLVEELEKIAVVKLLQRRSIISLIGNVQKSSLILEKVFQVFRSNGV 505
Query: 419 NVQMISQGASKVNISLVVHDSEAKQCIQALHSAFFEN 455
NVQMISQGASKVNISL+V+D EA+QC++ALHSAFFE
Sbjct: 506 NVQMISQGASKVNISLIVNDEEAEQCVRALHSAFFET 542
>AT4G19710.2 | chr4:10725229-10729536 FORWARD LENGTH=917
Length = 916
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 242/474 (51%), Gaps = 36/474 (7%)
Query: 2 KFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASEI 61
KFGG+ V +++R+R VA++I++ E +VV+SAM K T+ + KA S S +
Sbjct: 93 KFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLIRKAQSRDDSYLSAL 152
Query: 62 PELAVIKELHVRTI---DELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVSFGE 118
+ L R + D+L S + + + + + D++ GE
Sbjct: 153 EAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYIAGHASESFSDFVAGHGE 212
Query: 119 CMSTRIFAAYLNKLGKKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLQGDWIDDPA 178
S ++ + + K G + + D D+ + T+++ ++ + KRL + +P+
Sbjct: 213 LWSAQMLSYVVRKTGLECKWMDTRDVLIVNP---TSSNQVDPDFGESEKRLDKWFSLNPS 269
Query: 179 -IPIVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNICA 237
I I TGF+ ++ TTL R GSD +A +G L R++ +W DVDGV + DP
Sbjct: 270 KIIIATGFIASTPQNIP-TTLKRDGSDFSAAIMGALLRARQVTIWTDVDGVYSADPRKVN 328
Query: 238 NAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVITKTRDL 297
A+ + L+++EA E++YFGA VLHP+++ P +IP+ ++N +N APGT+I + +
Sbjct: 329 EAVILQTLSYQEAWEMSYFGANVLHPRTIIPVMRYNIPIVIRNIFNLSAPGTIICQPPED 388
Query: 298 SKSILTSIVLK-----SNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCV--ATSEV 350
+ + +K N+ ++++ T M G G + +F +D+G +V + A+SE
Sbjct: 389 DYDLKLTTPVKGFATIDNLALINVEGTGMAGVPGTASDIFGCVKDVGANVIMISQASSEH 448
Query: 351 SISLTLDPSKLWCRELIQQELDHVVEELE----------KIAVVHLLQHRSIISLIGNVQ 400
S+ C + ++E++ V E L +++ + ++ + SI++ +G
Sbjct: 449 SV----------CFAVPEKEVNAVSEALRSRFSEALQAGRLSQIEVIPNCSILAAVGQKM 498
Query: 401 RSSLILE-KAFNVLRRNGVNVQMISQGASKVNISLVVHDSEAKQCIQALHSAFF 453
S+ + F+ L + +NV+ ISQG S+ N+++V+ ++ + ++A+HS FF
Sbjct: 499 ASTPGVSCTLFSALAKANINVRAISQGCSEYNVTVVIKREDSVKALRAVHSRFF 552
>AT1G31230.1 | chr1:11158744-11163055 REVERSE LENGTH=912
Length = 911
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 242/479 (50%), Gaps = 46/479 (9%)
Query: 2 KFGGSSVASAERMREVADLILSFPEETPVVVLSAMGKTTNNLLLAGEKAVSCGAPKASEI 61
KFGG+ V ++ER+++VA +++ E +VV+SAM K T+ + +A S S +
Sbjct: 88 KFGGTCVGNSERIKDVAAVVVKDDSERKLVVVSAMSKVTDMMYDLIHRAES---RDDSYL 144
Query: 62 PELAVIKELHVRTI------DELGLDRSIVSGXXXXXXXXXKGVAMMKELTPRTRDYLVS 115
L+ + E H T DEL + ++ + + + T D++V
Sbjct: 145 SALSGVLEKHRATAVDLLDGDELSSFLARLNDDINNLKAMLRAIYIAGHATESFSDFVVG 204
Query: 116 FGECMSTRIFAAYLNKLGKKARQYDAFDIGFI--TTDDFTNADILEATYPAVAKRLQGDW 173
GE S ++ AA + K G DA D+ + T+ + + D +E+ KRL+ +
Sbjct: 205 HGELWSAQMLAAVVRKSGLDCTWMDARDVLVVIPTSSNQVDPDFVESE-----KRLEKWF 259
Query: 174 IDDPA-IPIVTGFLGKGWKSCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCD 232
+ A I I TGF+ ++ TTL R GSD +A + ++ +W DVDGV + D
Sbjct: 260 TQNSAKIIIATGFIASTPQNIP-TTLKRDGSDFSAAIMSALFRSHQLTIWTDVDGVYSAD 318
Query: 233 PNICANAIPVPYLTFEEAAELAYFGAQVLHPQSMRPAKEGDIPVRVKNSYNRRAPGTVIT 292
P + A+ + L+++EA E++YFGA VLHP+++ P + DIP+ ++N +N APGT+I
Sbjct: 319 PRKVSEAVVLKTLSYQEAWEMSYFGANVLHPRTIIPVMKYDIPIVIRNIFNLSAPGTMIC 378
Query: 293 KTRDLSKSILTSIVLK-----SNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCV-- 345
+ D +K N+ ++++ T M G G + +FS +++G +V +
Sbjct: 379 RQIDDEDGFKLDAPVKGFATIDNLALVNVEGTGMAGVPGTASAIFSAVKEVGANVIMISQ 438
Query: 346 ATSEVSISLTLDPSKLWCRELIQQELDHVVEELE----------KIAVVHLLQHRSIISL 395
A+SE S+ C + ++E+ V E L +++ + ++ + SI++
Sbjct: 439 ASSEHSV----------CFAVPEKEVKAVSEALNSRFRQALAGGRLSQIEIIPNCSILAA 488
Query: 396 IGNVQRSSL-ILEKAFNVLRRNGVNVQMISQGASKVNISLVVHDSEAKQCIQALHSAFF 453
+G S+ + FN L + +N++ I+QG S+ NI++VV + + ++A+HS F+
Sbjct: 489 VGQKMASTPGVSATFFNALAKANINIRAIAQGCSEFNITVVVKREDCIRALRAVHSRFY 547
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,735,066
Number of extensions: 384749
Number of successful extensions: 1186
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1180
Number of HSP's successfully gapped: 5
Length of query: 482
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 380
Effective length of database: 8,310,137
Effective search space: 3157852060
Effective search space used: 3157852060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)