BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0838400 Os03g0838400|AK069311
(369 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476 427 e-120
AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505 69 4e-12
AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499 68 7e-12
AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497 67 1e-11
AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502 66 3e-11
AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515 65 6e-11
>AT2G38290.1 | chr2:16039672-16042291 REVERSE LENGTH=476
Length = 475
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/337 (61%), Positives = 254/337 (75%)
Query: 22 PLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWGGGF 81
P +PMAT+VYFQ FAAIT ILVAGS+LGRM+ AWM FVPLWL FSYTVGA+S+WGGGF
Sbjct: 113 PYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGF 172
Query: 82 LFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPPNNILFTLTGAGLLWMGW 141
L+ WGVIDY GGYVIH+S+G+AGF AAYWVGPR + DRERFPPNN+L L GAGLLWMGW
Sbjct: 173 LYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGW 232
Query: 142 AGFNGGGPYAANSVASMAVLNTNICTAMSLIVWTCLDVIFFKKPSVVGAVQGMITGLVCI 201
+GFNGG PYAAN +S+AVLNTN+ A SL+VWT LDVIFF KPSV+GA+QGM+TGL +
Sbjct: 233 SGFNGGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGV 292
Query: 202 TPAAGVVQGWAALVMGVLAGSIPWYTMMILHKRSKILQRVDDTLGVFHTHXXXXXXXXXX 261
TP AG++Q WAA+++GV++G+ PW +MMI+HK+S +LQ+VDDTL VF+TH
Sbjct: 293 TPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIM 352
Query: 262 XXXFAEPTLCNLFLPVADSRXXXXXXXXXXXXXXXXXXXLFVVAWNVAVTSLICLAINLL 321
FA P LC L LP+ +R F+ WNV T++I LAI +
Sbjct: 353 TGLFAHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVF 412
Query: 322 VPLRMPDDKLEVGDDAVHGEEAYALWGDGEMYDVTKH 358
+PLRM +++L +GDDA HGEEAYALWGDGE +D T+H
Sbjct: 413 IPLRMAEEELGIGDDAAHGEEAYALWGDGEKFDATRH 449
>AT4G28700.1 | chr4:14161681-14163195 FORWARD LENGTH=505
Length = 504
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 134/358 (37%), Gaps = 43/358 (12%)
Query: 24 YPMATVVY----FQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWGG 79
+P T Y +Q FA + +GS+ R F+A++I+ Y + + W
Sbjct: 127 FPQPTFDYPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWSS 186
Query: 80 ----------GFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPP----- 124
LF GVID+ G V+H+ GIAG A GPR + P
Sbjct: 187 DGWASPARSENLLFQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGVGGKPVTLRG 246
Query: 125 NNILFTLTGAGLLWMGWAGFNGGG------PYAANSVASM-----AVLNTNICTAMSLIV 173
++ + G LLW GW GFN G Y +S AV T + T ++
Sbjct: 247 HSATLVVLGTFLLWFGWYGFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAVTTTLAGCT 306
Query: 174 WTCLDVIFFKKP-----SVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPWYTM 228
L +F K+ +V G++ G IT VV+ WAALV G +A + +
Sbjct: 307 -AALTTLFGKRLIDGYWNVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAA----WVL 361
Query: 229 MILHKRSKILQRVDDTLGVFHTHXXXXXXXXXXXXXFAEPT-LCNLFLPVADSRXXXXXX 287
M ++ ++ LQ DD L H FAE + +F +
Sbjct: 362 MGCNRLAEKLQ-FDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMG 420
Query: 288 XXXXXXXXXXXXXLFVVAWNVAVTSLICLAINLLVPLRMP-DDKLEVGDDAVHGEEAY 344
L + W + ++ L LR+P +D++ D HG AY
Sbjct: 421 GGGRLLAAHVVQILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAY 478
>AT3G24300.1 | chr3:8805858-8807354 REVERSE LENGTH=499
Length = 498
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 130/360 (36%), Gaps = 49/360 (13%)
Query: 24 YPMATVVY----FQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLW-- 77
+P T Y +Q FA + +GS+ R F+A++I+ F Y V + W
Sbjct: 122 FPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSP 181
Query: 78 ---------GGGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPPNNIL 128
LF G ID+ G V+H+ GIAG A GPR R RF
Sbjct: 182 DGWASPFRSADDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPR----RGRFEKGGRA 237
Query: 129 FTLTGAG---------LLWMGWAGFNGGG------PYAANSVASM--AVLNTNICTAMSL 171
L G LLW GW GFN G PY + S + T + T +S
Sbjct: 238 IALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSG 297
Query: 172 IVWTCLDVIFFKKP-----SVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPWY 226
L +F K+ +V G++ G IT VV+ WAA+V G +A +
Sbjct: 298 CT-AALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVV--- 353
Query: 227 TMMILHKRSKILQRVDDTLGVFHTHXXXXXXXXXXXXXFAEPTLCNLFLPVADSR-XXXX 285
++ +K ++++Q DD L H FA+ N R
Sbjct: 354 -LIGCNKLAELVQ-YDDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLF 411
Query: 286 XXXXXXXXXXXXXXXLFVVAWNVAVTSLICLAINLLVPLRMPDDKLEVGDDAV-HGEEAY 344
L +V W A + + L LR+ + G D HG AY
Sbjct: 412 MGGGGKLLGAQLVQILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAY 471
>AT3G24290.1 | chr3:8801400-8802890 REVERSE LENGTH=497
Length = 496
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 140/381 (36%), Gaps = 49/381 (12%)
Query: 24 YPMATVVY----FQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWG- 78
+P T Y +Q FA + +GS+ R F+A++I+ F Y V + W
Sbjct: 122 FPTLTSDYSFFLYQWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHWFWSP 181
Query: 79 ---------GGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRERFPPNNILF 129
LF G ID+ G V+H+ GIAG A GPR RFP
Sbjct: 182 DGWASPFRSEDRLFGTGAIDFAGSGVVHMVGGIAGLWGALIEGPRIG----RFPDGGHAI 237
Query: 130 TLTGAG---------LLWMGWAGFNGGG------PYAANSVASM--AVLNTNICTAMSLI 172
L G LLW GW GFN G PY + S + T + T +S
Sbjct: 238 ALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGC 297
Query: 173 VWTCLDVIFFKKP-----SVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPWYT 227
L +F K+ +V G++ G IT VV WAA+V G +A +
Sbjct: 298 T-AALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLV---- 352
Query: 228 MMILHKRSKILQRVDDTLGVFHTHXXXXXXXXXXXXXFAEPTLCNLFLPVADSRXXXXXX 287
++ +K +++L + DD L H FA+ N + R
Sbjct: 353 LIGCNKLAELL-KYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFM 411
Query: 288 XXXXXXXXXXXXXLFV-VAWNVAVTSLICLAINLLVPLRMPDDKLEVGDD-AVHGEEAYA 345
+ V V W A + + L LR+ + G D A HG AY
Sbjct: 412 GGGGKLLGAQLVQIIVIVGWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAY- 470
Query: 346 LWGDGEMYDVTKHGSDAAVAP 366
++ D + + GS AP
Sbjct: 471 IYHDNDDDSIGVPGSPVPRAP 491
>AT4G13510.1 | chr4:7858220-7859725 FORWARD LENGTH=502
Length = 501
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 138/376 (36%), Gaps = 57/376 (15%)
Query: 25 PMATVVY----FQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWG-- 78
P A+ Y +Q FA + +GS+ R F+A++I+ F Y V + W
Sbjct: 119 PTASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 178
Query: 79 ---------GGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQKDRE-----RFPP 124
G LF G ID+ G V+H+ GIAG A GPR +
Sbjct: 179 GWASPFRTDGDLLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALRG 238
Query: 125 NNILFTLTGAGLLWMGWAGFNGG-----------GPYAA--NSVASMAVLNTNI-CTAMS 170
++ + G LLW GW GFN G G Y ++V AV T CTA
Sbjct: 239 HSASLVVLGTFLLWFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTA-- 296
Query: 171 LIVWTCLDVIFFKKP-----SVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLAGSIPW 225
L +F K+ +V G++ G IT VV+ WAA++ G +A
Sbjct: 297 -----ALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAA---- 347
Query: 226 YTMMILHKRSKILQRV--DDTLGVFHTHXXXXXXXXXXXXXFAEPTLCNLFLPVADSRXX 283
++L +K+ +++ DD L H FA+ N R
Sbjct: 348 ---LVLLGCNKLAEKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPH 404
Query: 284 XXXXXXXXXXXXXXXXXLFVV-AWNVAVTSLICLAINLLVPLRM-PDDKLEVGDDAVHGE 341
+ V+ W A + + + LR+ +D++ D HG
Sbjct: 405 GLFMGGGGKLLGAQLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGG 464
Query: 342 EAYALWGDGEMYDVTK 357
AY + D E + +
Sbjct: 465 FAYMYFDDDESHKAIQ 480
>AT1G64780.1 | chr1:24061021-24062565 REVERSE LENGTH=515
Length = 514
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 97/237 (40%), Gaps = 45/237 (18%)
Query: 22 PLYPMATVVYF--QCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWG- 78
P P + +F Q FA + +GS+ R F+A++I+ F Y + W
Sbjct: 131 PERPGSDFSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSS 190
Query: 79 ----------GGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPRAQK-DRE----RFP 123
LF G ID+ G V+H+ GIAG A GPR + DR
Sbjct: 191 DGWASASRSDNNLLFGSGAIDFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALR 250
Query: 124 PNNILFTLTGAGLLWMGWAGFNGGG------------PYAA--NSVASMAVLNT-NICTA 168
++ + G LLW GW GFN G PY ++V AV T + CTA
Sbjct: 251 GHSASLVVLGTFLLWFGWYGFNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTA 310
Query: 169 MSLIVWTCLDVIFFKKP-----SVVGAVQGMITGLVCITPAAGVVQGWAALVMGVLA 220
L +F K+ +V+ G++ G IT VV+ WAA+V G +A
Sbjct: 311 -------ALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVA 360
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,494,828
Number of extensions: 295145
Number of successful extensions: 797
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 778
Number of HSP's successfully gapped: 6
Length of query: 369
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,364,969
Effective search space: 2250176661
Effective search space used: 2250176661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)