BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0836800 Os03g0836800|AK061197
(276 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02875.1 | chr3:631993-633859 FORWARD LENGTH=443 250 6e-67
AT5G56660.1 | chr5:22933278-22935011 FORWARD LENGTH=440 232 2e-61
AT5G54140.1 | chr5:21965833-21967834 FORWARD LENGTH=429 230 6e-61
AT1G51760.1 | chr1:19199562-19201424 FORWARD LENGTH=441 225 2e-59
AT1G51780.1 | chr1:19204602-19206453 FORWARD LENGTH=436 224 5e-59
AT5G56650.1 | chr5:22930825-22932488 FORWARD LENGTH=439 223 1e-58
AT1G44350.1 | chr1:16834749-16838201 REVERSE LENGTH=465 207 6e-54
>AT3G02875.1 | chr3:631993-633859 FORWARD LENGTH=443
Length = 442
Score = 250 bits (638), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 173/271 (63%), Gaps = 7/271 (2%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
KLVFQP EEGYAG Y +L++ +DD+ GI +HV +P+G + SRPG LAG+ FT T
Sbjct: 166 KLVFQPGEEGYAGAYEMLKDEILDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVT 225
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPE 120
++G+G SSAV++LQQIV+RE DPL+ VV+V I+GG A NVIP+
Sbjct: 226 VHGQGSHAATPHFSKDPVLAASSAVVALQQIVSRELDPLEAGVVTVGYIEGGHAQNVIPQ 285
Query: 121 SVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMY 180
S GGT RS++ DG+ ++ +RI+E+ E QA+V RC A V+F E K +P NDE +Y
Sbjct: 286 SAKFGGTFRSLSNDGLLFIQRRIKEISEAQASVYRCKAEVNFEEKKPSLHPVMNNDEGLY 345
Query: 181 AHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQ- 239
H K VAE+M+G+ N P MG EDF F+ Q+ AA F ET +
Sbjct: 346 EHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFTQKTKAAIFVLGVKN------ETLGAGKP 399
Query: 240 LHSPHFVVDEEALPVGAAFHAAVAIEYLNKN 270
LHSP+F VDEEALPVGAA HAA+A+ YL+++
Sbjct: 400 LHSPYFFVDEEALPVGAALHAAMAVSYLDEH 430
>AT5G56660.1 | chr5:22933278-22935011 FORWARD LENGTH=440
Length = 439
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 172/272 (63%), Gaps = 10/272 (3%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
L+FQPAEEG +G + EEGA+ +V+ IFG+H+ A +P G ASR G FLAG+ F A I
Sbjct: 166 LIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVI 225
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
GKGG SS VLSLQQ+V+RETDPL VV+V+ + GG AFNVIP+S
Sbjct: 226 TGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDS 285
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
+T+GGTLR+ T G + L +R++EVI QAAV+RC A+V+ + P P TVN++++Y
Sbjct: 286 ITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYK 343
Query: 182 HAKAVAESMLG-EANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQL 240
K V +LG EA V+ +P MG+EDF ++A+ IP F ET
Sbjct: 344 QFKKVVRDLLGQEAFVEAAPV-MGSEDFSYFAETIPGHF------SLLGMQDETNGYASS 396
Query: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNAS 272
HSP + ++E+ LP GAA HA++A++YL + AS
Sbjct: 397 HSPLYRINEDVLPYGAAIHASMAVQYLKEKAS 428
>AT5G54140.1 | chr5:21965833-21967834 FORWARD LENGTH=429
Length = 428
Score = 230 bits (586), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 170/271 (62%), Gaps = 6/271 (2%)
Query: 1 KLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTAT 60
+L+FQPAEEG AG +++++EGA+ D + IFGMHV GLP G +A+ GP LA ++ F+
Sbjct: 155 RLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIFSVR 214
Query: 61 INGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIK-GGEAFNVIP 119
++GK SS +L+LQ I++RE DPL V+SVT +K GG F+VIP
Sbjct: 215 MSGKSPASSETYSCVDPVLAASSTILALQLIISREVDPLLSHVLSVTFMKSGGSEFDVIP 274
Query: 120 ESVTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEM 179
V GGTLRS+TT+G+++L+KR++EV+EGQA V RC A +D ED P YPATVND ++
Sbjct: 275 AYVEFGGTLRSLTTNGINWLIKRLKEVVEGQAEVQRCKADIDMHEDDHPMYPATVNDHKL 334
Query: 180 YAHAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQ 239
+ + V + +LG VK + + M EDF FY Q+IP + E +
Sbjct: 335 HEFTEKVLKLLLGPEKVKPANKVMAGEDFAFYQQKIPGYYIGIGIRNE-----EIGSVRS 389
Query: 240 LHSPHFVVDEEALPVGAAFHAAVAIEYLNKN 270
+HSP+F +DE LP+G+A AA+A YL ++
Sbjct: 390 VHSPYFFLDENVLPIGSATFAALAEMYLQEH 420
>AT1G51760.1 | chr1:19199562-19201424 FORWARD LENGTH=441
Length = 440
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 162/268 (60%), Gaps = 9/268 (3%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
LVFQPAEEG G ++E G +++V IFG+HV L G V+SR GP LAGS F A I
Sbjct: 163 LVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKI 222
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
+GKGG S+ ++SLQ +V+RE DPL VV+V +GG AFNVIP+S
Sbjct: 223 SGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDS 282
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
VT+GGT R+ +T L KRI +VI QA+VN C A VDF+E++ P +P TVND+ ++
Sbjct: 283 VTIGGTFRAFSTKSFMQLKKRIEQVITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQ 342
Query: 182 HAKAVAESMLGEAN-VKLSPQGMGAEDFGFYAQRIPAAF-FXXXXXXXXXXMAETTTKNQ 239
K V+ MLG N V++ P MG+EDF FY Q IP F F MA
Sbjct: 343 FFKNVSGDMLGIENYVEMQPL-MGSEDFSFYQQAIPGHFSFVGMQNKARSPMASP----- 396
Query: 240 LHSPHFVVDEEALPVGAAFHAAVAIEYL 267
HSP+F V+EE LP GA+ HA++A YL
Sbjct: 397 -HSPYFEVNEELLPYGASLHASMATRYL 423
>AT1G51780.1 | chr1:19204602-19206453 FORWARD LENGTH=436
Length = 435
Score = 224 bits (570), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 164/275 (59%), Gaps = 7/275 (2%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
LVFQPAEEG AG ++E G +++V IFG+HV L G ++SR G +AGS RF ATI
Sbjct: 163 LVFQPAEEGGAGAKKIVEAGVLENVGAIFGLHVSNLLGLGQLSSREGLLMAGSGRFKATI 222
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
+GKGG S+ +LSLQ +V+RE DPL VV+V T +G +AFNVIP+S
Sbjct: 223 SGKGGHAALPQFAIDPVLAASNVILSLQHLVSREADPLDSQVVTVATFEGSDAFNVIPDS 282
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
VT+GGT R++ L +RI +VI QA+VN C A VDF+ED+ PP+P TVN++ ++
Sbjct: 283 VTIGGTFRALLPKSFEQLKQRIVQVITTQASVNMCNATVDFLEDETPPFPPTVNNKTLHL 342
Query: 182 HAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAF-FXXXXXXXXXXMAETTTKNQL 240
K V+ MLG N + M +EDF FY Q IP F F MA
Sbjct: 343 FYKNVSVDMLGIENYVETLPVMVSEDFAFYQQAIPGHFSFVGMQNKSHSPMANP------ 396
Query: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNASGPS 275
HSP F V+EE LP GA+ A++A YL ++S P+
Sbjct: 397 HSPFFEVNEELLPYGASLLASLATRYLLDSSSSPN 431
>AT5G56650.1 | chr5:22930825-22932488 FORWARD LENGTH=439
Length = 438
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 165/272 (60%), Gaps = 10/272 (3%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
L+FQPAEEG +G + EEGA+ +V+ IFG+H+ P G AS G F+AG+ F A I
Sbjct: 165 LIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEAVI 224
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
GKGG SS VLSLQ +V+RETDP VV+VT + GG AFNVIP+S
Sbjct: 225 TGKGGHAAIPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVVTVTKVNGGNAFNVIPDS 284
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
+T+GGTLR+ T G + L +RI+E+I QAAV+RC A+V+ + P P TVN+ ++Y
Sbjct: 285 ITIGGTLRAFT--GFTQLQERIKEIITKQAAVHRCNASVNLAPNGNQPMPPTVNNMDLYK 342
Query: 182 HAKAVAESMLG-EANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQL 240
K V +LG EA V+ P+ MG+EDF ++A+ IP F ET
Sbjct: 343 KFKKVVRDLLGQEAFVEAVPE-MGSEDFSYFAETIPGHF------SLLGMQDETQGYASS 395
Query: 241 HSPHFVVDEEALPVGAAFHAAVAIEYLNKNAS 272
HSPH+ ++E+ LP GAA HA +A++YL AS
Sbjct: 396 HSPHYRINEDVLPYGAAIHATMAVQYLKDKAS 427
>AT1G44350.1 | chr1:16834749-16838201 REVERSE LENGTH=465
Length = 464
Score = 207 bits (526), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 160/271 (59%), Gaps = 10/271 (3%)
Query: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
L+FQPAEE G ++E+GA+DDV+ IF +HV P GV+ SR GP LAG F A I
Sbjct: 204 LLFQPAEEAGNGAKNMIEDGALDDVEAIFAVHVSHIHPTGVIGSRSGPLLAGCGIFRAVI 263
Query: 62 NGKGGXXXXXXXXXXXXXXXSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
+ SSAV+SLQ IV+RE PL VVSVT+ GG + +V P++
Sbjct: 264 TSEDSRGAANLLLAA-----SSAVISLQGIVSREASPLDSQVVSVTSFDGGHSLDVAPDT 318
Query: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
V LGGT R+ + YL KRI+EV+ Q V C A V+F E + YP T N++ Y
Sbjct: 319 VVLGGTFRAFSNSSFYYLKKRIQEVLMDQVGVFGCQATVNFFEKQNAIYPPTTNNDATYN 378
Query: 182 HAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFXXXXXXXXXXMAETTTKNQLH 241
H K V +LG+++ L+PQ MGAEDF FY++ IPAAF+ E + + H
Sbjct: 379 HLKKVTIDLLGDSHFTLAPQMMGAEDFAFYSEIIPAAFYFIGIRNE-----ELGSVHIAH 433
Query: 242 SPHFVVDEEALPVGAAFHAAVAIEYLNKNAS 272
SPHF++DE++LPVGAA HAAVA YLN S
Sbjct: 434 SPHFMIDEDSLPVGAAVHAAVAERYLNDKHS 464
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,215,213
Number of extensions: 186690
Number of successful extensions: 353
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 341
Number of HSP's successfully gapped: 7
Length of query: 276
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 179
Effective length of database: 8,447,217
Effective search space: 1512051843
Effective search space used: 1512051843
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)