BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0833900 Os03g0833900|AK073655
         (186 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G28050.2  | chr5:10044209-10045484 REVERSE LENGTH=205          289   5e-79
AT3G05300.1  | chr3:1508024-1508487 REVERSE LENGTH=114            138   2e-33
AT1G68720.1  | chr1:25804547-25808820 FORWARD LENGTH=1308          78   2e-15
AT1G48175.1  | chr1:17790957-17792066 FORWARD LENGTH=183           47   6e-06

>AT5G28050.2 | chr5:10044209-10045484 REVERSE LENGTH=205
          Length = 204

 Score =  289 bits (740), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 134/180 (74%), Positives = 154/180 (85%)

Query: 7   VESKDGTISVASAFAGHQEAVQDRDHKFLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVV 66
           +E+KDGTISVASAF+GHQ+AV D DHKFL++AVEEAY+GVDCG GGPFGAV+V N+E+V 
Sbjct: 25  LEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCGDGGPFGAVIVHNNEVVA 84

Query: 67  SCHNMVLDYTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRL 126
           SCHNMVL YTDPTAHAEVTAIREACKKL KIELS+CE+YASCEPCPMCFGA+HLSR+KRL
Sbjct: 85  SCHNMVLKYTDPTAHAEVTAIREACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRL 144

Query: 127 VYGAKXXXXXXXXXXXXXXXXLRGTAYYQKANLEIRRADGNGALIAEQVFENTKEKFRMY 186
           VYGAK                LRGT  YQK++LEI++ADGNGA IAEQVF+NTKEKFR+Y
Sbjct: 145 VYGAKAEAAIAIGFDDFIADALRGTGVYQKSSLEIKKADGNGAAIAEQVFQNTKEKFRLY 204



>AT3G05300.1 | chr3:1508024-1508487 REVERSE LENGTH=114
          Length = 113

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 3/115 (2%)

Query: 71  MVLDYTDPTAHAEVTAIREACKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130
           MV  Y DPTAHAEV AIREACKKL +I+LS+CE+YASCEPCPMCFGA+HLSR+KRLVY A
Sbjct: 1   MVFKYKDPTAHAEVIAIREACKKLNEIKLSECEIYASCEPCPMCFGAIHLSRLKRLVYEA 60

Query: 131 KXXXXXXXXXXXXXXXXLRGTAYYQKANLEIRRADGNGALIAEQVFENTKEKFRM 185
           K                +RG   Y  +NLEI + D +   IAEQVF+NTK KF +
Sbjct: 61  KVEAALAIGFNRILADGVRGVGCYHNSNLEITKLDLS---IAEQVFQNTKGKFSL 112



>AT1G68720.1 | chr1:25804547-25808820 FORWARD LENGTH=1308
          Length = 1307

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 31   DHKFLSKAVEEAYQGVDCGHGGPFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIREA 90
            D  F+ +A+ EA +  D     P GAV+V + +I+   +N+V +  D TAHAE+  IRE 
Sbjct: 1110 DEIFMREALVEAKKAADTWEV-PVGAVLVHDGKIIARGYNLVEELRDSTAHAEMICIREG 1168

Query: 91   CKKLGKIELSDCEMYASCEPCPMCFGAVHLSRIKRLVYGA 130
             K L    L+D  +Y + EPCPMC GA+  +R+  LV+GA
Sbjct: 1169 SKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWGA 1208



>AT1G48175.1 | chr1:17790957-17792066 FORWARD LENGTH=183
          Length = 182

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 53  PFGAVVVRNDEIVVSCHNMVLDYTDPTAHAEVTAIREACKKLGKIELS---------DCE 103
           P G V + + +++ S  N   +  + T HAE+ AI +   +  K  LS          C 
Sbjct: 30  PVGCVFLEDGKVIASGRNRTNETRNATRHAEMEAIDQLVGQWQKDGLSPSQVAEKFSKCV 89

Query: 104 MYASCEPCPMCFGAVHLSRIKRLVYG 129
           +Y +CEPC MC  A+    IK + YG
Sbjct: 90  LYVTCEPCIMCASALSFLGIKEVYYG 115



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,574,299
Number of extensions: 123388
Number of successful extensions: 341
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 4
Length of query: 186
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 93
Effective length of database: 8,556,881
Effective search space: 795789933
Effective search space used: 795789933
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)