BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0832200 Os03g0832200|AK070712
(442 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09210.1 | chr1:2973217-2976655 REVERSE LENGTH=425 530 e-151
AT1G56340.1 | chr1:21090059-21092630 REVERSE LENGTH=426 525 e-149
AT1G08450.1 | chr1:2668008-2671800 REVERSE LENGTH=425 403 e-112
AT5G61790.1 | chr5:24827394-24829642 REVERSE LENGTH=531 202 3e-52
AT5G07340.2 | chr5:2317300-2319458 FORWARD LENGTH=541 192 2e-49
>AT1G09210.1 | chr1:2973217-2976655 REVERSE LENGTH=425
Length = 424
Score = 530 bits (1365), Expect = e-151, Method: Compositional matrix adjust.
Identities = 249/330 (75%), Positives = 283/330 (85%)
Query: 25 GEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAIS 84
V F+E+FDDGWE+RWVKSEWKKDDN AGEW HT+G W GDA+DKGIQTSEDYRFYAIS
Sbjct: 22 AAVIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAIS 81
Query: 85 AKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICG 144
A++PEFS+KDKTLV QFSVKHEQKLDCGGGY+KLL GDVDQKKFGG+TPYSIMFGPDICG
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICG 141
Query: 145 YATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYD 204
Y+TKKVHAILT N NHLIKKDVPC+TDQLTHVYT I+RPDA YSILIDN EKQTGS+Y
Sbjct: 142 YSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYS 201
Query: 205 DWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPXXXXXXX 264
DW+++PPK +DP AKKPEDWD+ EYI DPEDKKP+GYDDIPKEI D ++ KP
Sbjct: 202 DWDLLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDWDDEE 261
Query: 265 XXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIE 324
TAPTIPNPEY G W K++KNPNYKGKW+APLI NPD+KDDP +Y F L ++G+E
Sbjct: 262 DGEWTAPTIPNPEYMGEWKPKQIKNPNYKGKWEAPLIDNPDFKDDPELYVFPKLKYVGLE 321
Query: 325 LWQVKSGTLFDNILITDDPEYAKKFAEETW 354
LWQVKSG+LFDN+LI DDP+YAKK A+ETW
Sbjct: 322 LWQVKSGSLFDNVLICDDPDYAKKLADETW 351
>AT1G56340.1 | chr1:21090059-21092630 REVERSE LENGTH=426
Length = 425
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/330 (74%), Positives = 280/330 (84%)
Query: 25 GEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAIS 84
EV F+EKF+DGWE RWVKS+WKKDDN AGEW HT+G W GDA+DKGIQTSEDYRFYAIS
Sbjct: 22 AEVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAIS 81
Query: 85 AKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICG 144
A++PEFS+KDKTLV QFSVKHEQKLDCGGGY+KLL DVDQ KFGG+TPYSIMFGPDICG
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICG 141
Query: 145 YATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYD 204
Y+TKKVHAILT NG NHLIKK+VPC+TDQLTHVYT ++RPDA YSILIDN EKQTGS+Y
Sbjct: 142 YSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYS 201
Query: 205 DWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPXXXXXXX 264
DW+++P K +DP AKKPEDWDD EYIPDPED KP GYDDIPKEI D +A KP
Sbjct: 202 DWDLLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDWDDEE 261
Query: 265 XXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIE 324
TAPTIPNPEY G W KK+KNP YKGKWKAP+I NP++KDDP +Y F L ++G+E
Sbjct: 262 DGEWTAPTIPNPEYNGEWKPKKIKNPAYKGKWKAPMIDNPEFKDDPELYVFPKLKYVGVE 321
Query: 325 LWQVKSGTLFDNILITDDPEYAKKFAEETW 354
LWQVKSG+LFDN+L++DDPEYAKK AEETW
Sbjct: 322 LWQVKSGSLFDNVLVSDDPEYAKKLAEETW 351
>AT1G08450.1 | chr1:2668008-2671800 REVERSE LENGTH=425
Length = 424
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 186/328 (56%), Positives = 248/328 (75%)
Query: 25 GEVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAIS 84
E+F +E F+ GW+ RWV S+WK+++ +AG + HT+GKW GD D+KGIQT D + YAIS
Sbjct: 28 SEIFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAIS 87
Query: 85 AKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICG 144
AK PEFS+K++TLV+Q+SVK EQ ++CGG Y+KLL G V+QK+FGG+TPYS+MFGPDICG
Sbjct: 88 AKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICG 147
Query: 145 YATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYD 204
TKK+H I++ G+N+ IKKD+ C+TD+L H YT I+RPDA YS+L+DN E++ GS+Y
Sbjct: 148 TQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYT 207
Query: 205 DWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPXXXXXXX 264
DW+I+PP+ + AKKPEDWDD EYI DP D KPEG+D IP+EI D +A +P
Sbjct: 208 DWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDSIPREIPDRKAKEPEDWDEEE 267
Query: 265 XXXXTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDYKDDPYIYAFDSLNHIGIE 324
P IPN YKGPW K++KNPNYKGKWK P I NP+++DDP +Y S+ + GIE
Sbjct: 268 NGLWEPPKIPNSAYKGPWKAKRIKNPNYKGKWKNPWIDNPEFEDDPDLYVLKSIKYAGIE 327
Query: 325 LWQVKSGTLFDNILITDDPEYAKKFAEE 352
+WQVK+G++FDNILI DDP YA+ ++
Sbjct: 328 VWQVKAGSIFDNILICDDPAYARSIVDD 355
>AT5G61790.1 | chr5:24827394-24829642 REVERSE LENGTH=531
Length = 530
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 200/381 (52%), Gaps = 59/381 (15%)
Query: 26 EVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAISA 85
+ E FD+ ++ RW+ S K+ + G W H + + +D G+ SE R Y I
Sbjct: 28 QTVLYESFDEPFDGRWIVS---KNSDYEGVWKHAKSEGH---EDYGLLVSEKARKYGIVK 81
Query: 86 KYPE-FSSKDKTLVLQFSVKHEQKLDCGGGYVKLLG---GDVDQKKFGGETPYSIMFGPD 141
+ E + K+ T+VLQ+ V+ ++ L+CGG Y+K L + F E+PYSIMFGPD
Sbjct: 82 ELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPD 141
Query: 142 ICGYATKKVHAILT-KNGKN-----HLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNT 195
CG T KVH IL KN K+ H +K D+L+HVYT I++PD + IL+D
Sbjct: 142 KCG-GTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGE 200
Query: 196 EKQTGSIY--DDWN--IIPPKNKRDPEAKKPEDWDDNEYIPDP----------------- 234
EK+ ++ +D+ +IP K DPE KKPEDWD+ IPDP
Sbjct: 201 EKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIE 260
Query: 235 --EDKKPEGY-DDIPKEITDPEATKPXXXXXXXXXXXTAPTIPNPEYK-----GPWNQKK 286
E +KPEG+ DD P+E+ DPEATKP AP I NP+ + G W +
Sbjct: 261 DEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPM 320
Query: 287 LKNPNYKGKWKAPLIPNPDYKD--------DPYIYAFDS-----LNHIGIELWQVKSGTL 333
+NP YKGKW +PLI NP YK +P + D + IGIE+W ++ G L
Sbjct: 321 KRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGIL 380
Query: 334 FDNILITDDPEYAKKFAEETW 354
FDNILI D + A+ + + TW
Sbjct: 381 FDNILIAKDEKVAETYRQTTW 401
>AT5G07340.2 | chr5:2317300-2319458 FORWARD LENGTH=541
Length = 540
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 196/384 (51%), Gaps = 63/384 (16%)
Query: 26 EVFFQEKFDDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGIQTSEDYRFYAISA 85
E E FD+ ++ RWV SE G W H + + DD G+ SE + Y I
Sbjct: 36 EKILYESFDEPFDGRWVVSE---KAEYQGVWKHEKSEGH---DDYGLLVSEKAKKYGIVK 89
Query: 86 KY---PEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLL----GGDVDQKKFGGETPYSIMF 138
+ + + T+VLQ+ + ++ L+CGG Y+K L G V Q F ++PYSIMF
Sbjct: 90 ELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQG-FDNDSPYSIMF 148
Query: 139 GPDICGYATKKVHAILT-KNGKN-----HLIKKDVPCKTDQLTHVYTLIIRPDAKYSILI 192
GPD CG AT KVH IL KN K+ H +K D L+HVYT +++ D + IL+
Sbjct: 149 GPDKCG-ATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILV 207
Query: 193 DNTEKQTGSIY--DDWN--IIPPKNKRDPEAKKPEDWDDNEYIPDP-------------- 234
D EK+ G++ +D+ +IP K DPE KKPEDWD+ IPDP
Sbjct: 208 DGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAPM 267
Query: 235 -----EDKKPEGY-DDIPKEITDPEATKPXXXXXXXXXXXTAPTIPNPEYK-----GPWN 283
E +KPEG+ DD P E+ DPEA+KP AP + N + + G W
Sbjct: 268 EIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEWK 327
Query: 284 QKKLKNPNYKGKWKAPLIPNPDYKD--------DPYIYAFDSLN-----HIGIELWQVKS 330
+ +NP YKGKW +PLI NP YK +P + + N IGIE+W ++
Sbjct: 328 RPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERPNLEPIAAIGIEIWTMQD 387
Query: 331 GTLFDNILITDDPEYAKKFAEETW 354
G LFDNILI+ D + A+ + + TW
Sbjct: 388 GILFDNILISKDEKVAETYRQSTW 411
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,699,481
Number of extensions: 465094
Number of successful extensions: 833
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 782
Number of HSP's successfully gapped: 5
Length of query: 442
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 340
Effective length of database: 8,310,137
Effective search space: 2825446580
Effective search space used: 2825446580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 113 (48.1 bits)