BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0829200 Os03g0829200|AK108175
(338 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325 311 3e-85
AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322 284 5e-77
AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332 284 6e-77
AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376 280 7e-76
AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305 274 4e-74
AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321 272 2e-73
AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324 249 1e-66
>AT4G02340.1 | chr4:1035722-1037403 FORWARD LENGTH=325
Length = 324
Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 198/323 (61%), Gaps = 10/323 (3%)
Query: 11 IRHRTVEANGISIHVXXXXXXXXXXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDL 70
I H T+ NGI++HV +LF+HGFP+LWYSWRHQ+ A G+R +APDL
Sbjct: 4 IEHTTISTNGINMHVASIGSGPV----ILFVHGFPDLWYSWRHQLVSFAALGYRAIAPDL 59
Query: 71 RGYGDTDAPPEIESYSAFHXXXXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFRPDRVT 130
RGYGD+DAPP ESY+ H +VF+VGHDWGAI+AW++C+ RPDRV
Sbjct: 60 RGYGDSDAPPSRESYTILHIVGDLVGLLDSLGVDRVFLVGHDWGAIVAWWLCMIRPDRVN 119
Query: 131 ALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHARHII 190
ALVNTSV F ++K D F +G YYICRFQEPG EE+FA + +I
Sbjct: 120 ALVNTSVVF------NPRNPSVKPVDAFRALFGDDYYICRFQEPGEIEEDFAQVDTKKLI 173
Query: 191 RRTLCNRFTVHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGINYYRNM 250
R +R AWLTE+D+ ++ F + GFTGG+NYYR +
Sbjct: 174 TRFFTSRNPRPPCIPKSVGFRGLPDPPSLPAWLTEQDVRFYGDKFSQKGFTGGLNYYRAL 233
Query: 251 DRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDVVVIPGA 310
+ +WE+ APW +++VP KFIVGD D+TY+ G ++Y+H+GGLK VP L++VVV+ G
Sbjct: 234 NLSWELTAPWTGLQIKVPVKFIVGDLDITYNIPGTKEYIHEGGLKKHVPFLQEVVVMEGV 293
Query: 311 GHFIQQERAEEVSDLIYNFITKF 333
GHF+ QE+ +EV+D IY F KF
Sbjct: 294 GHFLHQEKPDEVTDHIYGFFKKF 316
>AT2G26740.1 | chr2:11393148-11394257 REVERSE LENGTH=322
Length = 321
Score = 284 bits (726), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 155/327 (47%), Positives = 195/327 (59%), Gaps = 10/327 (3%)
Query: 11 IRHRTVEANGISIHVXXXXXXXXXXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDL 70
+ HR V NGI IHV VL LHGFPELWYSWRHQ+ LA RG+R +APDL
Sbjct: 1 MEHRKVRGNGIDIHVAIQGPSDGPI--VLLLHGFPELWYSWRHQIPGLAARGYRAVAPDL 58
Query: 71 RGYGDTDAPPEIESYSAFHXX---XXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFRPD 127
RGYGD+DAP EI SY+ F+ KVFVVGHDWGA+IAWY+CLFRPD
Sbjct: 59 RGYGDSDAPAEISSYTCFNIVGDLIAVISALTASEDEKVFVVGHDWGALIAWYLCLFRPD 118
Query: 128 RVTALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHAR 187
RV ALVN SV F R ++K D YG YYICRFQE G E E A
Sbjct: 119 RVKALVNLSVPFS----FRPTDPSVKPVDRMRAFYGDDYYICRFQEFGDVEAEIAEVGTE 174
Query: 188 HIIRRTLCNRFTVHKA-GKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGINY 246
+++R L R K +WLTEED+ YF + FE GF+G +NY
Sbjct: 175 RVMKRLLTYRTPGPVIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFEEKGFSGPVNY 234
Query: 247 YRNMDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDVVV 306
YRN +RN E+ PW +K+QVPTKF++G+ DL Y+ G+++Y+H K +VPLLE+ VV
Sbjct: 235 YRNFNRNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLLEEPVV 294
Query: 307 IPGAGHFIQQERAEEVSDLIYNFITKF 333
+ G HFI QE+ +E+ +I +FI+KF
Sbjct: 295 MEGVAHFINQEKPQEILQIILDFISKF 321
>AT3G05600.1 | chr3:1623485-1624704 REVERSE LENGTH=332
Length = 331
Score = 284 bits (726), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 188/329 (57%), Gaps = 14/329 (4%)
Query: 11 IRHRTVEANGISIHVXXXXXXXXXXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDL 70
I HR V NGI++H+ VL LHGFP+LWY+WRHQ+ L+ G+R +APDL
Sbjct: 4 IDHRMVSVNGITMHIAEKGPKEGPV--VLLLHGFPDLWYTWRHQISGLSSLGYRAVAPDL 61
Query: 71 RGYGDTDAPPEIESYSAFHXX--XXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFRPDR 128
RGYGD+D+P Y+ + KVF+VGHDWGAII W++CLFRP++
Sbjct: 62 RGYGDSDSPESFSEYTCLNVVGDLVALLDSVAGNQEKVFLVGHDWGAIIGWFLCLFRPEK 121
Query: 129 VTALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHARH 188
+ V SV + RS +K F +G YYICRFQEPG E E A A R
Sbjct: 122 INGFVCLSVPY------RSRNPKVKPVQGFKAVFGDDYYICRFQEPGKIEGEIASADPRI 175
Query: 189 IIRRTLCNRF----TVHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGI 244
+R R + K W +++D+D++ + FE+ GFTGG+
Sbjct: 176 FLRNLFTGRTLGPPILPKDNPFGEKPNPNSENIELPEWFSKKDLDFYVSKFEKAGFTGGL 235
Query: 245 NYYRNMDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDV 304
NYYR MD NWE+ APW AK+QVP KF+ GD D+ Y G+++Y+H GG A+VP L+++
Sbjct: 236 NYYRAMDLNWELTAPWTGAKIQVPVKFMTGDFDMVYTTPGMKEYIHGGGFAADVPTLQEI 295
Query: 305 VVIPGAGHFIQQERAEEVSDLIYNFITKF 333
VVI AGHF+ QE+ +EV+ I +F TK
Sbjct: 296 VVIEDAGHFVNQEKPQEVTAHINDFFTKL 324
>AT4G15960.1 | chr4:9045763-9047199 REVERSE LENGTH=376
Length = 375
Score = 280 bits (716), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 195/328 (59%), Gaps = 10/328 (3%)
Query: 11 IRHRTVEANGISIHVXXXXXXXX-XXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPD 69
+ H+T++ NGI++HV +LFLHGFPELWY+WRHQM L+ G+R +APD
Sbjct: 54 VEHKTLKVNGINMHVAEKPGSGSGEDPIILFLHGFPELWYTWRHQMVALSSLGYRTIAPD 113
Query: 70 LRGYGDTDAPPEIESYSAFHXXXXXXXXXXXXX--XXKVFVVGHDWGAIIAWYMCLFRPD 127
LRGYGDT+AP ++E Y+ + V VVGHDWGA+IAW +C +RP+
Sbjct: 114 LRGYGDTEAPEKVEDYTYLNVDGDVVALIDAVTGGDKAVSVVGHDWGAMIAWQLCQYRPE 173
Query: 128 RVTALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHAR 187
+V ALVN SV F +R ++ +G YY+CRFQ+ G E EF
Sbjct: 174 KVKALVNMSVLFSPRNPVRVPVPTLR------HVFGDDYYVCRFQKAGEIETEFKKLGTE 227
Query: 188 HIIRRTLCNRFT-VHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGINY 246
++++ L + K WLT+ED+DY+ +E GFTG INY
Sbjct: 228 NVLKEFLTYKTPGPLNLPKDKYFKRSENAASALPLWLTQEDLDYYVTKYENKGFTGPINY 287
Query: 247 YRNMDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDVVV 306
YRN+DRNWE+ APW AK++VP KFI+GD DLTY++ G ++Y++ GG K +VPLL++ VV
Sbjct: 288 YRNIDRNWELTAPWTGAKIRVPVKFIIGDQDLTYNFPGAKEYINGGGFKRDVPLLDETVV 347
Query: 307 IPGAGHFIQQERAEEVSDLIYNFITKFI 334
+ G GHF+ +E + ++ I+NF KF+
Sbjct: 348 LKGLGHFLHEENPDVINQHIHNFFHKFL 375
>AT4G15955.3 | chr4:9043872-9045544 REVERSE LENGTH=305
Length = 304
Score = 274 bits (701), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 189/328 (57%), Gaps = 37/328 (11%)
Query: 13 HRTVEANGISIHVXXXXXXXXXXXXV-----LFLHGFPELWYSWRHQMEHLAGRGFRCLA 67
H V+ NGI++HV + LFLHGFPELWY+WRHQM L+ G+R +A
Sbjct: 7 HSFVKVNGITMHVAEKSPSVAGNGAIRPPVILFLHGFPELWYTWRHQMVALSSLGYRTIA 66
Query: 68 PDLRGYGDTDAPPEIESYSAFHXX--XXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFR 125
PDLRGYGDTDAP +++Y++ H KVFVVGHDWGAIIAW++CLFR
Sbjct: 67 PDLRGYGDTDAPESVDAYTSLHVVGDLIGLIDAVVGDREKVFVVGHDWGAIIAWHLCLFR 126
Query: 126 PDRVTALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAH 185
PDRV ALVN SV F K T F YG YYICRFQ +
Sbjct: 127 PDRVKALVNMSVVF------DPWNPKRKPTSTFKAFYGDDYYICRFQLLEI--------- 171
Query: 186 ARHIIRRTLCNRFTVHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGIN 245
+I+ +C GK +WLT+ D+ Y+ + +E+ GFTG +N
Sbjct: 172 ---LIKIHVC------IVGK------RYDDSVSLPSWLTDSDVKYYVSKYEKNGFTGPVN 216
Query: 246 YYRNMDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDVV 305
YYRNMDR WE+ ++AKV+VP KFI+GD DLTYH G + Y+H G K+ VPLL++VV
Sbjct: 217 YYRNMDRTWELMGSLSNAKVKVPVKFIIGDQDLTYHIPGSKKYIHDGRFKSHVPLLDEVV 276
Query: 306 VIPGAGHFIQQERAEEVSDLIYNFITKF 333
VI G GHFI +ER +E+S I+++ F
Sbjct: 277 VIKGVGHFIHEERPDEISKHIHDYFLTF 304
>AT2G26750.1 | chr2:11395971-11397085 REVERSE LENGTH=321
Length = 320
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 191/326 (58%), Gaps = 9/326 (2%)
Query: 11 IRHRTVEANGISIHVXXXXXXXXXXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDL 70
+ HR V NGI IHV VL LHGFPELWYSWRHQ+ LA RG+R +APDL
Sbjct: 1 MEHRNVRGNGIDIHVAIQGPSDGTI--VLLLHGFPELWYSWRHQISGLAARGYRAVAPDL 58
Query: 71 RGYGDTDAPPEIESYSAFHXX--XXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFRPDR 128
RGYGD+DAP EI S++ F+ KVFVVGHDWGA+IAWY+CLFRPD+
Sbjct: 59 RGYGDSDAPAEISSFTCFNIVGDLVAVISTLIKEDKKVFVVGHDWGALIAWYLCLFRPDK 118
Query: 129 VTALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHARH 188
V ALVN SV ++K D YG YY+CRFQE G E E A
Sbjct: 119 VKALVNLSVPLS----FWPTDPSVKPVDRMRAVYGNDYYVCRFQEVGDIEAEIAEVGTER 174
Query: 189 IIRRTLCNRFT-VHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGINYY 247
+++R L R K +WLTEED+ YF + F+ GF G +NYY
Sbjct: 175 VMKRLLTYRTPGPLIIPKDKSFWGSKGETIPLPSWLTEEDVAYFVSKFKEKGFCGPVNYY 234
Query: 248 RNMDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYAGIQDYLHKGGLKAEVPLLEDVVVI 307
RN +RN E+ PW +K+QVPTKF++G+ DL Y+ G+++Y+H K +VPL+E+ VV+
Sbjct: 235 RNFNRNNELLGPWVGSKIQVPTKFVIGELDLVYYMPGVKEYIHGPQFKEDVPLIEEPVVM 294
Query: 308 PGAGHFIQQERAEEVSDLIYNFITKF 333
G HF+ QE+ +E+ +I +FI+ F
Sbjct: 295 EGVAHFLNQEKPQEILQIILDFISTF 320
>AT3G51000.1 | chr3:18945258-18946499 REVERSE LENGTH=324
Length = 323
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 184/325 (56%), Gaps = 12/325 (3%)
Query: 11 IRHRTVEANGISIHVXXXXXXXXXXXXVLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDL 70
+R + ++ NGI ++V VL LHGFPE WYSWRHQ++ L+ G+ +APDL
Sbjct: 5 VREKKIKTNGIWLNVAEKGDEEGPL--VLLLHGFPETWYSWRHQIDFLSSHGYHVVAPDL 62
Query: 71 RGYGDTDAPPEIESYSAFHXXXXXXXXXXXXXXXKVFVVGHDWGAIIAWYMCLFRPDRVT 130
RGYGD+D+ P ESY+ H + FV GHDWGAII W +CLFRPDRV
Sbjct: 63 RGYGDSDSLPSHESYTVSHLVADVIGLLDHYGTTQAFVAGHDWGAIIGWCLCLFRPDRVK 122
Query: 131 ALVNTSVAFMRHVFIRSGADAIKTTDHFHKAYGPTYYICRFQEPGVAEEEFAPAHARHII 190
++ SV + F R +K +D F K +G YI +FQ+PG AE FA ++
Sbjct: 123 GFISLSVPY----FPRD--PKLKPSDFF-KIFGDGLYITQFQKPGRAEAAFAKHDCLSVM 175
Query: 191 RR-TLCNRFTVHKAGKXXXXXXXXXXXXXXXAWLTEEDIDYFAAAFERTGFTGGINYYRN 249
++ L R A W+TEE+I +A F+R+GFTG +NYYR+
Sbjct: 176 KKFLLITRTDYLVAPPDTEIIDHLEIPSTIPDWITEEEIQVYAEKFQRSGFTGPLNYYRS 235
Query: 250 MDRNWEMAAPWADAKVQVPTKFIVGDGDLTYHYA-GIQDYLHKGGLKAEVPLLEDVVVIP 308
MD NWE+ APW D+K+ VPTKFI GD D+ Y G +Y+ K VP LE +VVI
Sbjct: 236 MDMNWEILAPWQDSKIVVPTKFIAGDKDIGYEGPNGTMEYVKGEVFKIVVPNLE-IVVIE 294
Query: 309 GAGHFIQQERAEEVSDLIYNFITKF 333
G HFIQQE++E+VS I +F+ K
Sbjct: 295 GGHHFIQQEKSEQVSQEILSFLNKL 319
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.141 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,812,174
Number of extensions: 260652
Number of successful extensions: 551
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 526
Number of HSP's successfully gapped: 8
Length of query: 338
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 239
Effective length of database: 8,392,385
Effective search space: 2005780015
Effective search space used: 2005780015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)