BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0825700 Os03g0825700|AK067902
         (851 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09090.1  | chr3:2782912-2787552 REVERSE LENGTH=897           1117   0.0  

>AT3G09090.1 | chr3:2782912-2787552 REVERSE LENGTH=897
          Length = 896

 Score = 1117 bits (2890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/871 (63%), Positives = 641/871 (73%), Gaps = 49/871 (5%)

Query: 29  NKFRQREATDDMLGYPHLDEDALLKTKCPKHVELRWQTEVSSSIYATPLIADINSDGKLE 88
           NKFR+R+ATDD LGYP +DEDALL T+CPK +ELRWQTEV+SS+YATPLIADINSDGKL+
Sbjct: 26  NKFRERKATDDELGYPDIDEDALLNTQCPKKLELRWQTEVTSSVYATPLIADINSDGKLD 85

Query: 89  VVVPSFVHYLEVLEGSDGDKLPGWPAFHQSNVHSSPLLYDIDKDGTREIVLATYNGVVNF 148
           +VVPSFVHYLEVLEG+DGDK+PGWPAFHQSNVHSSPLL+DIDKDG REI LATYN  V F
Sbjct: 86  IVVPSFVHYLEVLEGADGDKMPGWPAFHQSNVHSSPLLFDIDKDGVREIALATYNAEVLF 145

Query: 149 FRVSGYMMMDKLEVPRRKVHKDWYVGLNTDPVDRSHPDVHDXXXXXXXXXXXXHPNIQDK 208
           FRVSG++M DKLEVPRRKVHK+W+VGLN DPVDRSHPDVHD                 + 
Sbjct: 146 FRVSGFLMSDKLEVPRRKVHKNWHVGLNPDPVDRSHPDVHDDVLEEEAMAMKSSTTQTNA 205

Query: 209 PVVNE-----------------SSKESQSRSTNDSTTRGV--------DSMKHASKEEPV 243
                                 S++E Q R  N+ T   V         SM   +     
Sbjct: 206 TTTTPNVTVSMTKEVHGANSYVSTQEDQKRPENNQTEAIVKPTPELHNSSMDAGANNLAA 265

Query: 244 ESKPNSTRGQENMDVLNN-----------------LNSTDAGNNSSL-----STTTENAS 281
            +    +R   N +V  N                 LN++   ++ +L     S+T E  +
Sbjct: 266 NATTAGSRENLNRNVTTNEVDQSKISGDKNETVIKLNTSTGNSSETLGTSGNSSTAETVT 325

Query: 282 HVQRRLLQTDEKSNQAGSSETDASDTGTA-KAATVENSEPLEADADASFNLFRDVXXXXX 340
              RRLL+ D  S ++  S +D+ D     + ATVEN   LEADAD+SF L R+      
Sbjct: 326 KSGRRLLEED-GSKESVDSHSDSKDNSEGVRMATVENDGGLEADADSSFELLRENDELAD 384

Query: 341 XXXXXXXXXXXXTMWGDEDWKEQQHEKAEDYVSIDAHILSTPVIADIDRDGIQEMVISVS 400
                        MWGDE+W E QHE +EDYV+IDAHIL TPVIADID+DG+QEM+++VS
Sbjct: 385 EYSYDYDDYVDEKMWGDEEWVEGQHENSEDYVNIDAHILCTPVIADIDKDGVQEMIVAVS 444

Query: 401 YFFDHEYYDKPEHLKELGGIDIGKYIASSIVVFNLDTRQVKWTAELDLSTDSGNFTAHAY 460
           YFFD EYYD PEHLKELGGIDI  YIASSIVVFNLDT+QVKW  ELDLSTD  NF A+ Y
Sbjct: 445 YFFDPEYYDNPEHLKELGGIDIKNYIASSIVVFNLDTKQVKWIKELDLSTDKANFRAYIY 504

Query: 461 SSPTVVDLDGDGNLDILVGTSFGLFYVIDHRGKVRNKFPLEMAEIHAPVIAADINDDGKI 520
           SSPTVVDLDGDG LDILVGTSFGLFY +DHRG +R KFPLEMAEI   V+AADINDDGKI
Sbjct: 505 SSPTVVDLDGDGYLDILVGTSFGLFYAMDHRGNIREKFPLEMAEIQGAVVAADINDDGKI 564

Query: 521 EMVTADVHGNVAAWTAEGEEIWEVHLKSLIPQRPTVGDVNGDGRTEVVVPTVSGNIYVLS 580
           E+VT D HGN+AAWT +G EIWE HLKSL+PQ P++GDV+GDG TEVVVPT SGNIYVLS
Sbjct: 565 ELVTTDSHGNIAAWTTQGVEIWEAHLKSLVPQGPSIGDVDGDGHTEVVVPTSSGNIYVLS 624

Query: 581 GKDGSKIQPFPYRTHGRIMSPVLLLDMSKHDEKSKGLTLATTSFDGYLYLIEGSSGCADV 640
           GKDGS ++P+PYRTHGR+M+ +LL+D++K  EK KGLT+ TTSFDGYLYLI+G + C DV
Sbjct: 625 GKDGSIVRPYPYRTHGRVMNQLLLVDLNKRGEKKKGLTIVTTSFDGYLYLIDGPTSCTDV 684

Query: 641 VDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKEWRSSNQGRNNAAY 700
           VDIGETSYSMVLADNVDGGDDLDLIV+TMNGNVFCFSTPSPHHPLK WRSS+QGRNN A 
Sbjct: 685 VDIGETSYSMVLADNVDGGDDLDLIVSTMNGNVFCFSTPSPHHPLKAWRSSDQGRNNKAN 744

Query: 701 RYNREGIYVKHGSRTFRDEEGKHFWVEFEIVDKYRVPYGNQAPYNVTVTLLVPGNYQGER 760
           RY+REG++V H +R FRDEEGK+FW E EIVDKYR P G+QAPYNVT TLLVPGNYQGER
Sbjct: 745 RYDREGVFVTHSTRGFRDEEGKNFWAEIEIVDKYRYPSGSQAPYNVTTTLLVPGNYQGER 804

Query: 761 RIVVNAAYNEPGKQRMKLPTVPVRTTGTVLVEMVDKNGFYFSDEFSLTFHMHYYKXXXXX 820
           RI  +  Y+ PGK R+KLPTV VRTTGTV+VEM DKNG +FSDEFSLTFHM+YYK     
Sbjct: 805 RITQSQIYDRPGKYRIKLPTVGVRTTGTVMVEMADKNGLHFSDEFSLTFHMYYYKLLKWL 864

Query: 821 XXXXXXGMFSVLVILRPQEGAPLPSFSRNID 851
                 GMF +LVILRPQE  PLPSFSRN D
Sbjct: 865 LVLPMLGMFGLLVILRPQEAVPLPSFSRNTD 895



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,368,098
Number of extensions: 815308
Number of successful extensions: 1886
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1873
Number of HSP's successfully gapped: 3
Length of query: 851
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 744
Effective length of database: 8,173,057
Effective search space: 6080754408
Effective search space used: 6080754408
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 116 (49.3 bits)