BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0820900 Os03g0820900|AK072450
(474 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46450.2 | chr3:17093297-17095319 REVERSE LENGTH=495 411 e-115
AT4G36490.1 | chr4:17222099-17224808 FORWARD LENGTH=544 67 2e-11
AT2G21540.1 | chr2:9220831-9223737 REVERSE LENGTH=549 66 5e-11
AT2G21520.2 | chr2:9215956-9218953 FORWARD LENGTH=638 64 1e-10
AT4G34580.1 | chr4:16515422-16518527 FORWARD LENGTH=555 64 2e-10
AT2G18180.1 | chr2:7911054-7913695 REVERSE LENGTH=559 63 3e-10
AT4G39180.1 | chr4:18244006-18246673 REVERSE LENGTH=555 63 4e-10
AT2G16380.1 | chr2:7085972-7088858 FORWARD LENGTH=548 62 7e-10
AT4G36640.1 | chr4:17277187-17278447 REVERSE LENGTH=295 59 5e-09
AT4G39170.1 | chr4:18240887-18243621 FORWARD LENGTH=615 59 6e-09
AT1G75370.2 | chr1:28276440-28279798 REVERSE LENGTH=669 58 1e-08
AT5G47510.1 | chr5:19275048-19276999 FORWARD LENGTH=377 57 3e-08
AT1G19650.1 | chr1:6796431-6799537 REVERSE LENGTH=609 55 6e-08
AT3G24840.1 | chr3:9067301-9070256 FORWARD LENGTH=580 54 2e-07
AT1G22180.2 | chr1:7828434-7829745 REVERSE LENGTH=315 53 3e-07
>AT3G46450.2 | chr3:17093297-17095319 REVERSE LENGTH=495
Length = 494
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/465 (44%), Positives = 299/465 (64%), Gaps = 19/465 (4%)
Query: 23 ALVASPAKAISPKTVKQIVPGKHLILSGESTSHLASFLVKVIALEVVRRFSKARCPFIWN 82
+LVA+ +A+ K + G + + + A FL+K+ LEVVRR SKA+CP +WN
Sbjct: 27 SLVAAIPRAVQQTISKHVSFGSNGRFGSGTARNAAVFLLKIAVLEVVRRVSKAKCPHLWN 86
Query: 83 SIQALQVLGYPPFRWIQQWAPLKFIVQGIQ--------KLSTPLLFLSVTTTLCDRSS-K 133
S+QALQ L YPP +WIQ+WAP K ++ +Q LS PLL +++ L D+S K
Sbjct: 87 SLQALQCLCYPPLKWIQRWAPFKELINAMQLLCVIVMQMLSRPLLVITIAEALTDQSELK 146
Query: 134 RNDELGSNTEAPDVPSESDETA---STSGIRDVADGTKDTEPDNWLISLFKELEKQGITL 190
+ G+N+ A ++ S S IR + +WL L++ELEKQ ++L
Sbjct: 147 QEASGGTNSHASSESESQSDSQTLQSPSDIRIEDEAPLPVISQDWLRKLYEELEKQRLSL 206
Query: 191 PERFNEDELRRFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSHLVFWHGFDTM 250
PER NEDEL RFY +NGDF+SLLSS+KKTI WRET+ IL+ ELE WS L+FWHG+D
Sbjct: 207 PERLNEDELHRFYRVSNGDFTSLLSSIKKTIHWRETYRILSEEELETWSSLLFWHGYDKN 266
Query: 251 LRPCLIVRLGLACSSLAPSDRPRFGQAVVSQIDNGIVYLTNKEDPRITVLLDCHGISPFR 310
RPCLIVRLGLA L +RPRF QA++SQ+++G+++L E+ +TVL+DC G+SP R
Sbjct: 267 QRPCLIVRLGLAFLKLPSHERPRFAQAIISQVEHGVLHLLTPENSELTVLVDCEGLSPLR 326
Query: 311 FPMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGESYK 370
PMQMMRS +I+Q+++PNRLG LFI+RLPPVVRVI+QT IQ+L+P+T++KLR EGE++
Sbjct: 327 IPMQMMRSCSSILQDHFPNRLGCLFIIRLPPVVRVISQTFIQILRPTTRKKLRIEGETFH 386
Query: 371 KTLAEFLQIVPTFLGGKCSCPQC------EKPRNISVIQAGEGSKSQPRQITIDDGSPVA 424
+ L+E+LQ +P++LG C+C +C + P+ + + S S+ ++ S A
Sbjct: 387 RVLSEYLQTLPSYLGSNCNCKRCSNLNEQDPPQPQTHPRRKRRSSSETEKLDDSHWSYNA 446
Query: 425 SM-NFDEAELPSPYSCENAIRAAIIGVLMLWVFIAFLAGMNDPES 468
+ + PS C +R A++ +LM+W+F A LAG DPES
Sbjct: 447 QTPDLSYEDEPSLNICSQVLRTAVVFLLMIWLFGALLAGFADPES 491
>AT4G36490.1 | chr4:17222099-17224808 FORWARD LENGTH=544
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 32/265 (12%)
Query: 151 SDETASTSGIRDVADGTKDTEPDNWLISL-FKELEKQGITLPERFNEDELR-RFYIAANG 208
S + S I DV D + D + SL EL LPE+ ++ + RF A
Sbjct: 35 SSKVMSVEIIEDVHDAEELKAVDAFRQSLILDEL------LPEKHDDYHMMLRFLKARKF 88
Query: 209 DFSSLLSSVKKTIRWRETFHILTLHELEKWSH----LVFW----HGFDTMLRPCLIVRLG 260
D + +RWR+ F T+ E + L ++ HG D RP I RLG
Sbjct: 89 DLEKTKQMWTEMLRWRKEFGADTVMEEFDFKEIDEVLKYYPQGHHGVDKEGRPVYIERLG 148
Query: 261 LACSS--LAPSDRPRFGQAVVSQIDN-------GIVYLTNKEDPRITVLLDCHGISPFRF 311
L S+ + + R+ V + + K + T +LD G+ F
Sbjct: 149 LVDSTKLMQVTTMDRYVNYHVMEFERTFNVKFPACSIAAKKHIDQSTTILDVQGVGLKNF 208
Query: 312 PMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGE 367
+ R IT +Q +NYP L +FI+ R++ T+ L P T K+ G
Sbjct: 209 N-KAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGN 267
Query: 368 SYKKTLAEFLQ--IVPTFLGGKCSC 390
Y+ L E + +P FLGG C+C
Sbjct: 268 KYQSKLLEIIDESELPEFLGGSCTC 292
>AT2G21540.1 | chr2:9220831-9223737 REVERSE LENGTH=549
Length = 548
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 41/280 (14%)
Query: 190 LPERFNEDELR-RFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSHL------- 241
LP + ++ + RF A D I WR+ F + T+ E + +
Sbjct: 86 LPSKHDDHHMMLRFLRARKFDLEKAKQMWTDMIHWRKEFGVDTIMEDFDFKEIDEVLKYY 145
Query: 242 -VFWHGFDTMLRPCLIVRLGL--ACSSLAPSDRPRFGQAVVSQIDN-------GIVYLTN 291
+HG D RP I RLG A + + R+ + V + +
Sbjct: 146 PQGYHGVDKDGRPVYIERLGQVDATKLMQVTTIDRYVKYHVREFEKTFNIKLPACSIAAK 205
Query: 292 KEDPRITVLLDCHGISPFRF---PMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQ 348
K + T +LD G+ F +++ I +NYP L +FI+ R++
Sbjct: 206 KHIDQSTTILDVQGVGLKSFSKAARDLLQRIQKIDSDNYPETLNRMFIINAGSGFRLLWS 265
Query: 349 TLIQVLKPSTKQKLRFEGESYKKTLAEFLQI--VPTFLGGKCSCPQ---CEK-------- 395
T+ L P T K+ G Y+ L E + +P FLGG C+C C +
Sbjct: 266 TVKSFLDPKTTAKIHVLGNKYQSKLLEIIDSNELPEFLGGNCTCADKGGCMRSDKGPWND 325
Query: 396 PRNISVIQAGEG-------SKSQPRQITIDDGSPVASMNF 428
P ++Q GEG S + + I++D+ + + S +F
Sbjct: 326 PDIFKMVQNGEGKCPRKTLSNIEEKTISVDENTTMKSDSF 365
>AT2G21520.2 | chr2:9215956-9218953 FORWARD LENGTH=638
Length = 637
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 150 ESDETASTSGIRDVADGTKDTEPDNWLISLFKELEKQGITLPERFNEDELR-RFYIAANG 208
+SD S+ I DV D + D + SL + LP+R ++ + RF A
Sbjct: 70 KSDGRVSSVSIEDVRDVEELQAVDAFRQSLLMDE-----LLPDRHDDYHMMLRFLKARKF 124
Query: 209 DFSSLLSSVKKTIRWRETFHILTL---HELEKWSHLV-----FWHGFDTMLRPCLIVRLG 260
D I+WR+ F T+ + E+ + ++ +HG D RP I RLG
Sbjct: 125 DVEKAKQMWADMIQWRKEFGTDTIIQDFDFEEINEVLKHYPQCYHGVDKEGRPIYIERLG 184
Query: 261 LACSS--LAPSDRPRFGQAVVSQIDNGIVYL-------TNKEDPRITVLLDCHGISPFRF 311
+ + + R+ + V + + + + T +LD G+ F
Sbjct: 185 KVDPNRLMQVTSMDRYVRYHVKEFERSFMIKFPSCTISAKRHIDSSTTILDVQGVGLKNF 244
Query: 312 PMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGE 367
+ R IT +Q +NYP L +FI+ P R++ T+ L P T K+ G
Sbjct: 245 N-KSARDLITRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTSAKIHVLGY 303
Query: 368 SYKKTLAEFLQI--VPTFLGGKCSC 390
Y L E + + +P FLGG C+C
Sbjct: 304 KYLSKLLEVIDVNELPEFLGGACTC 328
>AT4G34580.1 | chr4:16515422-16518527 FORWARD LENGTH=555
Length = 554
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 83/212 (39%), Gaps = 22/212 (10%)
Query: 201 RFYIAANGDFSSLLSSVKKTIRWRETFHILTLHE---LEKWSHLV-----FWHGFDTMLR 252
RF A D I+WR+ F T+ E E+ ++ +HG D R
Sbjct: 91 RFLRARKFDIEKAKQMWSDMIQWRKDFGADTIIEDFDFEEIDEVMKHYPQGYHGVDKEGR 150
Query: 253 PCLIVRLGL--ACSSLAPSDRPRFGQAVVSQIDN-------GIVYLTNKEDPRITVLLDC 303
P I RLG A L + R+ + V + + NK + T +LD
Sbjct: 151 PVYIERLGQIDANKLLQVTTMDRYVKYHVKEFEKTFKVKFPSCSVAANKHIDQSTTILDV 210
Query: 304 HGISPFRF---PMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQ 360
G+ F ++++ I ENYP L +FI+ R++ T+ L P T
Sbjct: 211 QGVGLKNFSKSARELLQRLCKIDNENYPETLNRMFIINAGSGFRLLWSTVKSFLDPKTTA 270
Query: 361 KLRFEGESYKKTLAEFLQI--VPTFLGGKCSC 390
K+ G Y L E + +P F GG C+C
Sbjct: 271 KIHVLGNKYHSKLLEVIDASELPEFFGGACTC 302
>AT2G18180.1 | chr2:7911054-7913695 REVERSE LENGTH=559
Length = 558
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 190 LPERFNEDELR-RFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSH----LVFW 244
LP++ ++ + RF A D +RWR+ F T+ E ++ L ++
Sbjct: 72 LPDKHDDYHMMLRFLKARKFDLEKTNQMWSDMLRWRKEFGADTVMEDFEFKEIDEVLKYY 131
Query: 245 ----HGFDTMLRPCLIVRLGLACSS--LAPSDRPRFGQAVVSQIDN-------GIVYLTN 291
HG D RP I RLG S+ + + R+ V + +
Sbjct: 132 PQGHHGVDKEGRPVYIERLGQVDSTKLMQVTTMDRYVNYHVMEFERTFNVKFPACSIAAK 191
Query: 292 KEDPRITVLLDCHGISPFRFPMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIA 347
K + T +LD G+ F + R IT +Q +NYP L +FI+ R++
Sbjct: 192 KHIDQSTTILDVQGVGLKNFN-KAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLW 250
Query: 348 QTLIQVLKPSTKQKLRFEGESYKKTLAEFLQI--VPTFLGGKCSC 390
T+ L P T K+ G Y+ L E + +P FLGG C+C
Sbjct: 251 NTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGSCTC 295
>AT4G39180.1 | chr4:18244006-18246673 REVERSE LENGTH=555
Length = 554
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 98/253 (38%), Gaps = 36/253 (14%)
Query: 190 LPERFNEDELR-RFYIAANGDFSSLLSSVKKTIRWR---------ETFHILTLHELEKWS 239
LP + ++ + RF A D + WR E F + E+ K+
Sbjct: 87 LPSKHDDHHMMLRFLRARKFDLEKAKQMWSDMLNWRKEYGADTIMEDFDFKEIEEVVKY- 145
Query: 240 HLVFWHGFDTMLRPCLIVRLGL--ACSSLAPSDRPRFGQAVVSQIDN-------GIVYLT 290
+ +HG D RP I RLG A + + R+ + V + +
Sbjct: 146 YPQGYHGVDKEGRPIYIERLGQVDATKLMKVTTIDRYVKYHVKEFEKTFNVKFPACSIAA 205
Query: 291 NKEDPRITVLLDCHGISPFRF---PMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIA 347
+ + T +LD G+ F +++S I +NYP L +FI+ R++
Sbjct: 206 KRHIDQSTTILDVQGVGLSNFNKAAKDLLQSIQKIDNDNYPETLNRMFIINAGCGFRLLW 265
Query: 348 QTLIQVLKPSTKQKLRFEGESYKKTLAEFLQI--VPTFLGGKCSCPQ---CEK------- 395
T+ L P T K+ G Y+ L E + +P FLGGKC+C C +
Sbjct: 266 NTVKSFLDPKTTAKIHVLGNKYQTKLLEIIDANELPEFLGGKCTCADKGGCMRSDKGPWN 325
Query: 396 -PRNISVIQAGEG 407
P ++Q GEG
Sbjct: 326 DPEIFKLVQNGEG 338
>AT2G16380.1 | chr2:7085972-7088858 FORWARD LENGTH=548
Length = 547
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 25/259 (9%)
Query: 156 STSGIRDVADGTKDTEPDNWL-ISLFKELEKQGITLPERFNEDELR-RFYIAANGDFSSL 213
++S I VA+ T D D++L + F+++ LP + ++ + RF A D
Sbjct: 45 TSSKIVSVAN-TDDINGDDYLSVEAFRQVLVLDDLLPPKHDDLHMMLRFLRARKFDKEKA 103
Query: 214 LSSVKKTIRWRETFHILTL---HELEKWSHLVF-----WHGFDTMLRPCLIVRLGL--AC 263
++WR F + T+ E E+ ++ +HG D RP I RLG A
Sbjct: 104 KQMWSDMLQWRMDFGVDTIIEDFEFEEIDQVLKHYPQGYHGVDKEGRPVYIERLGQIDAN 163
Query: 264 SSLAPSDRPRFGQAVVSQIDN-------GIVYLTNKEDPRITVLLDCHGISPFRF---PM 313
L + R+ + V + + K + T + D G+ F
Sbjct: 164 KLLQATTMDRYEKYHVKEFEKMFKIKFPSCSAAAKKHIDQSTTIFDVQGVGLKNFNKSAR 223
Query: 314 QMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGESYKKTL 373
++++ + I +NYP L +FI+ P R++ + + L P T K+ G Y+ L
Sbjct: 224 ELLQRLLKIDNDNYPETLNRMFIINAGPGFRLLWAPIKKFLDPKTTSKIHVLGNKYQPKL 283
Query: 374 AEFLQI--VPTFLGGKCSC 390
E + +P F GG C+C
Sbjct: 284 LEAIDASELPYFFGGLCTC 302
>AT4G36640.1 | chr4:17277187-17278447 REVERSE LENGTH=295
Length = 294
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 199 LRRFYIAANGDFSSLLSSVKKTIRWRETFHILTL------HELE--KWSHLVFWHGFDTM 250
LRRF A N D +++T++WR T+ + HE E K S F D
Sbjct: 44 LRRFLDARNWDVEKAKKMIQETLKWRSTYKPQEIRWNQVAHEGETGKASRASF---HDRQ 100
Query: 251 LRPCLIVRLGLACSSLAPSDRPRFGQAVVSQIDNGIVYLTNKEDPRITVLLDCHGIS-PF 309
R LI+R + S+ + + +V ++N I+ L K +++ L+D G S
Sbjct: 101 GRVVLIMRPAMQNSTSQEGN----IRHLVYLLENAIINLP-KGQKQMSWLIDFTGWSMAV 155
Query: 310 RFPMQMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRF 364
PM+ R I I+Q YP RLG+ F+ P + + + + L P T +K++F
Sbjct: 156 NPPMKTTREIIHILQNYYPERLGIAFLYNPPRLFQAVYRAAKYFLDPRTAEKVKF 210
>AT4G39170.1 | chr4:18240887-18243621 FORWARD LENGTH=615
Length = 614
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 106/267 (39%), Gaps = 34/267 (12%)
Query: 150 ESDETASTSGIRDVADGTKDTEPDNWLISLFKELEKQGITLPERFNEDELR-RFYIAANG 208
+SD S+ I DV D + D + +L E LP + ++ + RF A
Sbjct: 64 KSDVRVSSVSIEDVRDVEELQAVDEFRQALVMEE-----LLPHKHDDYHMMLRFLKARKF 118
Query: 209 DFSSLLSSVKKTIRWRETFHILTLHE----------LEKWSHLVFWHGFDTMLRPCLIVR 258
D I+WR+ F T+ + L+ + H +H D RP I R
Sbjct: 119 DIEKAKHMWADMIQWRKEFGTDTIIQDFQFEEIDEVLKYYPH--GYHSVDKEGRPVYIER 176
Query: 259 LGLACSS--LAPSDRPRFGQAVVSQIDNGIVY-------LTNKEDPRITVLLDCHGISPF 309
LG + + + R+ + V + + + K T +LD G+
Sbjct: 177 LGKVDPNKLMQVTTLDRYIRYHVKEFERSFMLKFPACTIAAKKYIDSSTTILDVQGVGLK 236
Query: 310 RFPMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFE 365
F + R IT +Q +NYP L +FI+ P R++ T+ L P T K+
Sbjct: 237 NF-TKSARELITRLQKIDGDNYPETLHQMFIINAGPGFRLLWSTVKSFLDPKTTSKIHVL 295
Query: 366 GESYKKTLAEFLQI--VPTFLGGKCSC 390
G Y+ L E + +P FLGG C+C
Sbjct: 296 GCKYQSKLLEIIDSSELPEFLGGACTC 322
>AT1G75370.2 | chr1:28276440-28279798 REVERSE LENGTH=669
Length = 668
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 201 RFYIAANGDFSSLLSSVKKTIRWRETFHILTLHE----------LEKWSHLVFWHGFDTM 250
RF A D I+WR+ F T+ E L+ + H +HG D
Sbjct: 116 RFLKARKFDIGKTKLMWSNMIKWRKDFGTDTIFEDFEFEEFDEVLKYYPH--GYHGVDKE 173
Query: 251 LRPCLIVRLGLA--CSSLAPSDRPRFGQAVVSQIDNGI-------VYLTNKEDPRITVLL 301
RP I RLGL + + RF + V + + + + T +L
Sbjct: 174 GRPVYIERLGLVDPAKLMQVTTVERFIRYHVREFEKTVNIKLPACCIAAKRHIDSSTTIL 233
Query: 302 DCHGISPFRFPMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPS 357
D G+ F+ + R I +Q +NYP L +FI+ +++ T+ Q L P
Sbjct: 234 DVQGVG-FKNFSKPARDLIIQLQKIDNDNYPETLHRMFIINGGSGFKLVWATVKQFLDPK 292
Query: 358 TKQKLRFEGESYKKTLAEFLQI--VPTFLGGKCSC 390
T K+ G Y+ L E + +P FLGG C+C
Sbjct: 293 TVTKIHVIGNKYQNKLLEIIDASQLPDFLGGTCTC 327
>AT5G47510.1 | chr5:19275048-19276999 FORWARD LENGTH=377
Length = 376
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 27/255 (10%)
Query: 163 VADGTKDTE---PDNW-LISLFKELEKQGITLPERF-NEDELRRFYIAANGDFSSLLSSV 217
++DGT + E P+N ++ F+ L LP++ + + LRRF + D +
Sbjct: 10 ISDGTMNKEEQSPNNEEMVEAFRNLLLLHGHLPDKHGDHNTLRRFLKMRDFDLEKSKEAF 69
Query: 218 KKTIRWRETFHILTLHE---LEKWSHLV--FWHGF---DTMLRPCLIVRLGLA--CSSLA 267
++WR + + + + E++ + + HGF D RP I RLG+ + L
Sbjct: 70 LNYMKWRVDYKVDLISQKFKFEEYGEVKKHYPHGFHKVDKTGRPIYIERLGMTDLNAFLK 129
Query: 268 PSDRPRFGQAVVSQIDNGIVY-------LTNKEDPRITVLLDCHGI--SPFRFPMQMMRS 318
+ R+ + + + + ++K T +LD G+ S F P + +
Sbjct: 130 ATTIERYVNYHIKEQEKTMSLRYPACSIASDKHVSSTTTILDVSGVGMSNFSKPARSLFM 189
Query: 319 FITIVQENY-PNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGESYKKTLAEFL 377
I + NY P L LF+V R++ L L T K++ G +Y L E +
Sbjct: 190 EIQKIDSNYYPETLHRLFVVNASSGFRMLWLALKTFLDARTLAKVQVLGPNYLGELLEAI 249
Query: 378 Q--IVPTFLGGKCSC 390
+ +PTFLGG C+C
Sbjct: 250 EPSNLPTFLGGNCTC 264
>AT1G19650.1 | chr1:6796431-6799537 REVERSE LENGTH=609
Length = 608
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 24/213 (11%)
Query: 201 RFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSHL--------VFWHGFDTMLR 252
RF A D I+WR F T+ E ++ L +HG D R
Sbjct: 107 RFLFARKFDLGKAKLMWTNMIQWRRDFGTDTILEDFEFPELDEVLRYYPQGYHGVDKEGR 166
Query: 253 PCLIVRLGLACSS--LAPSDRPRFGQAVVSQIDNGIVY-------LTNKEDPRITVLLDC 303
P I RLG +S + + R+ + V + + I + T +LD
Sbjct: 167 PVYIERLGKVDASKLMQVTTLERYLRYHVKEFEKTITVKFPACCIAAKRHIDSSTTILDV 226
Query: 304 HGISPFRFPMQMMRSFITIVQ----ENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTK 359
G+ F + R I +Q +NYP L +FI+ +++ T+ L P T
Sbjct: 227 QGLGLKNF-TKTARDLIIQLQKIDSDNYPETLHRMFIINAGSGFKLLWGTVKSFLDPKTV 285
Query: 360 QKLRFEGESYKKTLAEFLQI--VPTFLGGKCSC 390
K+ G Y+ L E + +P F GG C+C
Sbjct: 286 SKIHVLGNKYQNKLLEMIDASQLPDFFGGTCTC 318
>AT3G24840.1 | chr3:9067301-9070256 FORWARD LENGTH=580
Length = 579
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 22/250 (8%)
Query: 163 VADGTKDTEPDNWLISLFKELEKQGITLPERFNEDELRRFYIAANGDFSSLLSSVKKTIR 222
V + +D E + + K L + P + + RF A D + ++ ++
Sbjct: 68 VIEDVRDEEEEKAVNVFRKALVSLDLLPPRHDDYHTMLRFLKARRFDLEKTVQMWEEMLK 127
Query: 223 WRETFHILTL--------HELEKWSHLVFWHGFDTMLRPCLIVRLGLACSS--LAPSDRP 272
WR+ + T+ +E + + +HG D RP I RLG + +
Sbjct: 128 WRKENGVDTIIQDFVYDEYEEVQQYYPHGYHGVDREGRPVYIERLGKIDPGKLMKVTTLE 187
Query: 273 RFGQAVVSQIDN-------GIVYLTNKEDPRITVLLDCHGISPFRF---PMQMMRSFITI 322
RF + V + + T ++D HG+S F ++ I
Sbjct: 188 RFLRYHVQGFEKTFSEKFPACSIAAKRHINSSTTIIDVHGVSWMSFRKLAQDLVMRMQKI 247
Query: 323 VQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRFEGESYKKTLAEFLQ--IV 380
+NYP L ++I+ +++ T+ L P T K+ G Y+ L E + +
Sbjct: 248 DGDNYPETLNQMYIINAGNGFKLVWNTVKGFLDPKTTSKIHVLGNKYRSHLLEIIDPSEL 307
Query: 381 PTFLGGKCSC 390
P FLGG C C
Sbjct: 308 PEFLGGNCKC 317
>AT1G22180.2 | chr1:7828434-7829745 REVERSE LENGTH=315
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 199 LRRFYIAANGDFSSLLSSVKKTIRWRETFHILTLHELEKWSHLVFWHGFDTMLRPCLIVR 258
+ R+ A NG +K+T++WR + + +W + + R +
Sbjct: 49 ITRYLAARNGHVKKATKMLKETLKWRAQYKPEEI----RWEEIAREAETGKIYRANCTDK 104
Query: 259 LGLACSSLAPS---DRPRFGQA--VVSQIDNGIVYLTNKEDPRITVLLDCHGISPFRFPM 313
G + PS + GQ +V ++N I+ L + ++ ++ L+D HG + +
Sbjct: 105 YGRTVLVMRPSCQNTKSYKGQIRILVYCMENAILNLPDNQE-QMVWLIDFHGFNMSHISL 163
Query: 314 QMMRSFITIVQENYPNRLGVLFIVRLPPVVRVIAQTLIQVLKPSTKQKLRF 364
++ R ++QE+YP RLG+ + P + + + L+P T K++F
Sbjct: 164 KVSRETAHVLQEHYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKF 214
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,184,375
Number of extensions: 426199
Number of successful extensions: 1317
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1299
Number of HSP's successfully gapped: 15
Length of query: 474
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 372
Effective length of database: 8,310,137
Effective search space: 3091370964
Effective search space used: 3091370964
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)