BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0820600 Os03g0820600|AK058941
(139 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 194 1e-50
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 187 2e-48
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 185 6e-48
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 183 2e-47
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 178 9e-46
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 178 9e-46
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 177 2e-45
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 174 9e-45
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 152 5e-38
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 142 4e-35
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 138 1e-33
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 123 2e-29
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 194 bits (492), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 115/138 (83%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SG+A+HDDCKL+F EL++KR HRFI + ++ K K++IV+K+G+ +YEDF +SL
Sbjct: 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+AIYDFDF+TAE+ KS+IF+I W PD AKVRSKM+YASS +RFK+EL+GIQ+E
Sbjct: 61 PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+ LD LK RV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 187 bits (474), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 113/137 (82%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SG+A+HDDCKLKF EL++KR HRFI + ++ K++IV+KIG+ ++ED +SL
Sbjct: 1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+AI+DFDF+++E VP+SRIF++ WSPD A+VRSKM+YASS +RFK+EL+GIQ+E
Sbjct: 61 PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 VQATDAGEISLDALKDR 137
+QATD E+ LD K R
Sbjct: 121 LQATDPTEMDLDVFKSR 137
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 185 bits (470), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 114/138 (82%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANS+SG+ + D+CKLKF EL++KR +RFI F +D K +++++DK+G+ +YEDFT S+
Sbjct: 1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
PE +CR+A+YD+DF T E+ KS+IF+I WSPD ++VRSKMLYASS +RFK+EL+GIQ+E
Sbjct: 61 PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+SLD +K RV
Sbjct: 121 LQATDPSEMSLDIIKGRV 138
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 183 bits (465), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 110/136 (80%)
Query: 2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLP 61
AN++SG+A+HDDCKL+F EL++KR HRFI + ++ K K+++V+K+G +YE+F + LP
Sbjct: 13 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
+CR+AIYDFDF+TAE+ KS+IF+I W PD AKVRSKM+YASS +RFK+EL+GIQ+E+
Sbjct: 73 ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132
Query: 122 QATDAGEISLDALKDR 137
QATD E+ LD + R
Sbjct: 133 QATDPTEMDLDVFRSR 148
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 178 bits (451), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SG+A+HDDCKLKF EL++KR R I + +++K ++IV+K+G+ SY+DF +SL
Sbjct: 1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDK--QVIVEKLGEPEQSYDDFAASL 58
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P DCR+ IYDFDF+TAE+ KS+IF+I WSPD AKVR KM+YASS +RFK+EL+GIQ+E
Sbjct: 59 PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 118
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+ LD K R
Sbjct: 119 LQATDPTEMGLDVFKSRT 136
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 178 bits (451), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 114/138 (82%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MANS+SG+ ++D+CK+KF EL++KR +RFI F +D K +++ ++K+G+ +Y+DFTSS+
Sbjct: 1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P+ +CR+A+YDFDF T ++ KS+IF+I WSPD ++VRSKMLYASS +RFK+E+ GIQ+E
Sbjct: 61 PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120
Query: 121 VQATDAGEISLDALKDRV 138
+QATD E+SLD +K R+
Sbjct: 121 LQATDPSEMSLDIIKGRL 138
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SG+A+ D+CKLKF EL++KR +RFI F +D G++++V+K+G +Y+DFT+ L
Sbjct: 1 MANAASGMAVEDECKLKFLELKAKRNYRFIIFRID--GQQVVVEKLGSPQENYDDFTNYL 58
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+A+YDFDF TAE++ KS+IF+I WSPD+++VR KM+YASS +RFK+EL+GIQ+E
Sbjct: 59 PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 VQATDAGEISLDALKDR 137
+QATD E+SLD +K R
Sbjct: 119 LQATDPSEMSLDIIKSR 135
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 174 bits (442), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
MAN++SG+A+ D+CKLKF EL+SKR +RFI F +D G++++V+K+G+ +Y+DFT+SL
Sbjct: 1 MANAASGMAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASL 58
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
P +CR+A++DFDF+T E+ KS+IF+I WSPD+++VR KM+YASS +RFK+EL+GIQ+E
Sbjct: 59 PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 VQATDAGEISLDALKDR 137
+QATD E+S D +K R
Sbjct: 119 LQATDPSEMSFDIIKSR 135
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 99/136 (72%)
Query: 3 NSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE 62
N+ SG+ + D+ K F ELQ K+ HR++ F +D KE++V+K G+ T SY+DF +SLP+
Sbjct: 10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69
Query: 63 GDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQ 122
DCR+A+YDFDF+T+E+ KS+IF+ WSP + +R+K+LY++S ++ +EL GI E+Q
Sbjct: 70 NDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQ 129
Query: 123 ATDAGEISLDALKDRV 138
ATD E+ L+ L++R
Sbjct: 130 ATDPTEVDLEVLRERA 145
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 142 bits (359), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 99/139 (71%)
Query: 1 MANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSL 60
+ ++SG+ + DDCK F E++ K++HR++ + ++ K +++ VDK+G SY+D +SL
Sbjct: 3 LKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 62
Query: 61 PEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLE 120
PE DCR+A++DFD++T ++ S+IF+I WSP+ +++R KM+YA+S ++ L+G+ E
Sbjct: 63 PEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYE 122
Query: 121 VQATDAGEISLDALKDRVK 139
+QATD E+ D ++DR K
Sbjct: 123 LQATDPTEMGFDKIQDRAK 141
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 96/136 (70%)
Query: 4 SSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG 63
+++G+ + D+C F +++ K++HR+I F ++ K +++ VDK+G SY D SLP
Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67
Query: 64 DCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQA 123
DCR+A++DFDF+T ++ KS+IF+I WSP+ +K+R+K+LYA+S + ++ L GI E+QA
Sbjct: 68 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQA 127
Query: 124 TDAGEISLDALKDRVK 139
TD E+ D ++DR K
Sbjct: 128 TDPTEMGFDIIQDRAK 143
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 123 bits (309), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 93/137 (67%), Gaps = 11/137 (8%)
Query: 8 VAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKI------GDRTTSYEDFTSSLP 61
+ +HDDCKL F EL+ +R R I + +++ ++IV+K G+R SYE+F +SLP
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIED-NMQVIVEKHHYKKMHGEREQSYEEFANSLP 59
Query: 62 EGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEV 121
+CR+AI D +F+ E +I +I WSP AK+R KM+Y+S+ +RFK+EL+GIQ+E
Sbjct: 60 ADECRYAILDIEFVPGE----RKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEF 115
Query: 122 QATDAGEISLDALKDRV 138
ATD +ISLDA++ R+
Sbjct: 116 HATDLTDISLDAIRRRI 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,909,958
Number of extensions: 113182
Number of successful extensions: 278
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 273
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 51
Effective length of database: 8,693,961
Effective search space: 443392011
Effective search space used: 443392011
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 106 (45.4 bits)