BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0796000 Os03g0796000|AK064912
         (190 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22850.1  | chr3:8089067-8090275 FORWARD LENGTH=249            268   1e-72
AT5G43830.1  | chr5:17622593-17624239 REVERSE LENGTH=252          249   8e-67
AT3G15450.1  | chr3:5213050-5213998 FORWARD LENGTH=254            208   2e-54
AT4G27450.1  | chr4:13727665-13728683 REVERSE LENGTH=251          207   2e-54
AT5G19140.1  | chr5:6423398-6425785 FORWARD LENGTH=235            174   2e-44

>AT3G22850.1 | chr3:8089067-8090275 FORWARD LENGTH=249
          Length = 248

 Score =  268 bits (685), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 124/183 (67%), Positives = 148/183 (80%), Gaps = 2/183 (1%)

Query: 7   RLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGPYPADQVVR 66
           RLFA  D++FC+FQG IEN+ +LKQQYGL  K +TE+ I+IEAYRTLRDRGPY A+QVVR
Sbjct: 67  RLFAVVDDMFCIFQGHIENVPILKQQYGL-TKTATEVTIVIEAYRTLRDRGPYSAEQVVR 125

Query: 67  DINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDSRLVVSDDDEIVNKACGKSSAPF 126
           D  GKF F+LYDCS  +VF+A D DGSVP YWG D +  LVVSDD E V K CGKS APF
Sbjct: 126 DFQGKFGFMLYDCSTQNVFLAGDVDGSVPLYWGTDAEGHLVVSDDVETVKKGCGKSFAPF 185

Query: 127 PKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEVCGTTYTVDAKAKKDSSIPRVGSAADW 186
           PKG FFT+SGGL+SYEHP NE+KPVPR+DS GEVCG T+ VD++AKK+ ++PRVGS  +W
Sbjct: 186 PKGCFFTSSGGLRSYEHPSNELKPVPRVDSSGEVCGVTFKVDSEAKKE-AMPRVGSVQNW 244

Query: 187 SSQ 189
           S Q
Sbjct: 245 SKQ 247



>AT5G43830.1 | chr5:17622593-17624239 REVERSE LENGTH=252
          Length = 251

 Score =  249 bits (635), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 143/184 (77%), Gaps = 2/184 (1%)

Query: 7   RLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGPYPADQVVR 66
           RLFA  D+IFCLFQG IEN+  LKQQYGL NK + E  I+IEAYRTLRDRGPYP D+VVR
Sbjct: 68  RLFAVVDDIFCLFQGHIENLPFLKQQYGL-NKITNEAIIVIEAYRTLRDRGPYPVDKVVR 126

Query: 67  DINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDSRLVVSDDDEIVNKACGKSSAPF 126
           D +GKFAF+L+D    +VF A DADGSVPF+WG D +  LV SD+ E+V K C KS  PF
Sbjct: 127 DFHGKFAFILFDSVKKTVFAAADADGSVPFFWGTDAEGHLVFSDNTEMVKKGCAKSYGPF 186

Query: 127 PKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEVCGTTYTVDAKAKKD-SSIPRVGSAAD 185
           PKG FFT+SGGL+S+EHP NE+KPVPR+DS G+VCG T+ VDA+ K++ + +PRV S+ +
Sbjct: 187 PKGCFFTSSGGLRSFEHPKNELKPVPRVDSSGDVCGATFKVDAETKREGTKMPRVDSSQN 246

Query: 186 WSSQ 189
           W+  
Sbjct: 247 WAGH 250



>AT3G15450.1 | chr3:5213050-5213998 FORWARD LENGTH=254
          Length = 253

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/186 (51%), Positives = 128/186 (68%), Gaps = 1/186 (0%)

Query: 2   TIPRRRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGPYPA 61
           T  R+RLF   D I+C+F G + N+  L +QYGL  K S E   +IEAYRTLRDRGPYPA
Sbjct: 64  TSLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDRGPYPA 123

Query: 62  DQVVRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDSRLVVSDDDEIVNKACGK 121
           DQV+R + G FAFV+YD   +SVF A  +DG    YWG+  D  +V+SDD +I+ + C K
Sbjct: 124 DQVLRGLEGSFAFVVYDTQTSSVFSALSSDGGESLYWGISGDGSVVMSDDIQIIKQGCAK 183

Query: 122 SSAPFPKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEVCGTTYTVDAKAKKDSSIPRVG 181
           S APFP G  F +  GL+S++HP N +K +PR+DS+G +CG ++ VDA +K + SIPR G
Sbjct: 184 SFAPFPNGCMFHSETGLKSFDHPTNMMKAMPRIDSEGVLCGASFKVDACSKIN-SIPRRG 242

Query: 182 SAADWS 187
           S A+W+
Sbjct: 243 SEANWA 248



>AT4G27450.1 | chr4:13727665-13728683 REVERSE LENGTH=251
          Length = 250

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/183 (51%), Positives = 129/183 (70%), Gaps = 2/183 (1%)

Query: 5   RRRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGPYPADQV 64
            +RLF   D+I+CLF G++ N+  L +QYGL  K + E   +IEAYRTLRDRGPYPADQV
Sbjct: 69  HQRLFCGFDDIYCLFFGSLNNLCQLNKQYGL-TKTTNEAMFVIEAYRTLRDRGPYPADQV 127

Query: 65  VRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDSRLVVSDDDEIVNKACGKSSA 124
           V+D++G F+FV+YD    SVF A  +DG V  YWG+  D  +V+SDD +++ + C KS A
Sbjct: 128 VKDLDGSFSFVVYDSKAGSVFTALGSDGGVKLYWGIAADGSVVISDDLDVIKEGCAKSFA 187

Query: 125 PFPKGFFFTTSGGLQSYEHPMNEVKPVPRLDSKGEVCGTTYTVDAKAKKDSSIPRVGSAA 184
           PFP G  F + GGL S+EHPMN++K +PR+DS+G +CG  + VD   + + SIPR GS A
Sbjct: 188 PFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKVDVYNRVN-SIPRRGSEA 246

Query: 185 DWS 187
           +WS
Sbjct: 247 NWS 249



>AT5G19140.1 | chr5:6423398-6425785 FORWARD LENGTH=235
          Length = 234

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 121/165 (73%), Gaps = 4/165 (2%)

Query: 5   RRRLFAATDEIFCLFQGTIENIAVLKQQYGLHNKGSTEINIIIEAYRTLRDRGPYPADQV 64
           R R F A DEIFCLFQG+++N+  LKQQYGL  K + E+ ++IEAY+TLRDR PYPA+ V
Sbjct: 66  RPRSFGAKDEIFCLFQGSLDNLGSLKQQYGLA-KNANEVLLVIEAYKTLRDRAPYPANHV 124

Query: 65  VRDINGKFAFVLYDCSNNSVFMATDADGSVPFYWGVDPDSRLVVSDDDEIVNKACGKSSA 124
           V  ++G FAFV++D S +++F+A+D  G VP YWG+  D  +  +DD +++  ACGKS A
Sbjct: 125 VAHLSGDFAFVVFDKSTSTLFVASDQVGKVPLYWGITADGYVAFADDVDLLKGACGKSLA 184

Query: 125 PFPKGFFFTTS-GGLQSYEHPMNEVKPVPRLDSKGEVCGTTYTVD 168
            FP+G +++T+ GGL+S+E+P N++  VP   ++GE+ G T+ V+
Sbjct: 185 SFPQGCYYSTALGGLRSFENPKNKITAVPA--NEGEIWGATFKVE 227



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,404,520
Number of extensions: 188846
Number of successful extensions: 411
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 5
Length of query: 190
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 97
Effective length of database: 8,556,881
Effective search space: 830017457
Effective search space used: 830017457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)