BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0794500 Os03g0794500|AK071839
(411 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18170.1 | chr5:6006172-6008248 FORWARD LENGTH=412 752 0.0
AT3G03910.1 | chr3:1006913-1008846 FORWARD LENGTH=412 749 0.0
AT5G07440.1 | chr5:2356153-2358012 FORWARD LENGTH=412 703 0.0
AT1G51720.1 | chr1:19181741-19186297 FORWARD LENGTH=638 131 8e-31
>AT5G18170.1 | chr5:6006172-6008248 FORWARD LENGTH=412
Length = 411
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/411 (85%), Positives = 387/411 (94%)
Query: 1 MNALAATSRNFKQAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDN 60
MNALAAT+RNFK AA+LLGLDSKLEKSLLIPFREIKVECTIPKDDGTLAS+VGFRVQHDN
Sbjct: 1 MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERL 120
ARGPMKGGIRYH EVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC P LSISELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERL 120
Query: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 180
TRVFTQKIHDLIGIHTDVPAPDMGT QTMAWILDEYSKFHGYSPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTG 240
RDAATGRGV+F TEALL EHGK I+GQRFVIQGFGNVGSWAA+LISE GGK++A+SD+TG
Sbjct: 181 RDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITG 240
Query: 241 AVKNSNGLDIAKLMKHSSENRGIKGFDGGDAIDPRSLLTEECDVLIPAALGGVINKDNAN 300
A+KN +G+DI L+KH+ E+RG+KGFDG D IDP S+L E+CD+L+PAALGGVIN++NAN
Sbjct: 241 AIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENAN 300
Query: 301 EIKAKYIIEAANHPTDPEADEILSKKGVLILPDILANSGGVTVSYFEWVQNIQGFMWDEE 360
EIKAK+IIEAANHPTDP+ADEILSKKGV+ILPDI ANSGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 EIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360
Query: 361 KVNNELKTYMTRGFRDVKEMCRSHHCDLRMGAFTLGVNRVARATVLRGWEA 411
KVN+ELKTYMTR F+D+KEMC++H CDLRMGAFTLGVNRVA+AT+LRGW A
Sbjct: 361 KVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILRGWGA 411
>AT3G03910.1 | chr3:1006913-1008846 FORWARD LENGTH=412
Length = 411
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/409 (85%), Positives = 386/409 (94%)
Query: 1 MNALAATSRNFKQAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDN 60
MNALAAT+RNFK A++LLGLDSKLEKSLLIPFREIKVECTIPKDDGTLAS+VGFRVQHDN
Sbjct: 1 MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60
Query: 61 ARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERL 120
ARGPMKGGIRYH EV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC P +LS+SELERL
Sbjct: 61 ARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERL 120
Query: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 180
TRVFTQKIHDLIGIHTDVPAPDMGT QTMAWILDEYSKFHG+SPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTG 240
RDAATGRGVLFATEALL EHGK I+GQRF IQGFGNVGSWAA+LIS+ GGK++A+SDVTG
Sbjct: 181 RDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTG 240
Query: 241 AVKNSNGLDIAKLMKHSSENRGIKGFDGGDAIDPRSLLTEECDVLIPAALGGVINKDNAN 300
A+KN+NG+DI L++H+ ENRGIKGFDG D+IDP S+L E+CD+L+PAALGGVIN++NAN
Sbjct: 241 AIKNNNGIDILSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVINRENAN 300
Query: 301 EIKAKYIIEAANHPTDPEADEILSKKGVLILPDILANSGGVTVSYFEWVQNIQGFMWDEE 360
EIKAK+IIE ANHPTDPEADEIL KKGV+ILPDI ANSGGVTVSYFEWVQNIQGFMWDEE
Sbjct: 301 EIKAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360
Query: 361 KVNNELKTYMTRGFRDVKEMCRSHHCDLRMGAFTLGVNRVARATVLRGW 409
KVN ELKTYMTRGF+D+KEMC++H CDLRMGAFTLG+NRVA+AT +RGW
Sbjct: 361 KVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIRGW 409
>AT5G07440.1 | chr5:2356153-2358012 FORWARD LENGTH=412
Length = 411
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/411 (79%), Positives = 373/411 (90%)
Query: 1 MNALAATSRNFKQAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDN 60
MNALAAT+RNF+ A+++LGLDSK+E+SL+IPFREIKVECTIPKDDGTL SY+GFRVQHDN
Sbjct: 1 MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60
Query: 61 ARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERL 120
ARGPMKGGIRYH EVDPDEVNALAQLMTWKTAVA+IPYGGAKGGIGCSP DLS+SELERL
Sbjct: 61 ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120
Query: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLG 180
TRVFTQKIHDLIGIHTDVPAPDMGTN+QTMAWILDEYSKFHG+SPAVVTGKP+DLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
Query: 181 RDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTG 240
R+AATGRGV+FATEALLAE+GK I G FVIQGFGNVG+WAA+LI E GGKV+A+SD+TG
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240
Query: 241 AVKNSNGLDIAKLMKHSSENRGIKGFDGGDAIDPRSLLTEECDVLIPAALGGVINKDNAN 300
A++N G+DI L+KH + F+GGDA++ LL ECDVLIP ALGGV+NK+NA
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300
Query: 301 EIKAKYIIEAANHPTDPEADEILSKKGVLILPDILANSGGVTVSYFEWVQNIQGFMWDEE 360
++KAK+I+EAANHPTDP+ADEILSKKGV+ILPDI AN+GGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360
Query: 361 KVNNELKTYMTRGFRDVKEMCRSHHCDLRMGAFTLGVNRVARATVLRGWEA 411
KVN EL+ YMTR F ++K MC +H C+LRMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411
>AT1G51720.1 | chr1:19181741-19186297 FORWARD LENGTH=638
Length = 637
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 26 KSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQ 85
+ LL P R I D G GFRVQ + A GP +GGIR+H ++ L
Sbjct: 237 ERLLEPERMIVFRVPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGF 296
Query: 86 LMTWKTAVANIPYGGAKGGIGCSPGDLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGT 145
T K A++ GGA GG P S +E+ R + F +++ +G D+P+ ++G
Sbjct: 297 QQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDKDLPSEEVGV 356
Query: 146 NSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLGRDAATGRGVLFATEALLAEHGKGIA 205
++ M ++ +Y + G TG + S R A+G GV++ +LA+ K I
Sbjct: 357 GTREMGYLFGQYRRLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFARLILADMNKEIK 416
Query: 206 GQRFVIQGFGNVGSWAAQLISEAGGKVIAISDVTGAVKNSNGLDIAK---LMKHSSENRG 262
G R V+ G G + + + G + +SD G + + +G D K L S+ R
Sbjct: 417 GLRCVVSGCGKIAMHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRS 476
Query: 263 IKGFDGGDA----IDPRSLLTEECDVLIPAALGGVINKDNA-NEIKA--KYIIEAANHPT 315
++ + A D E CDV P A +++ +A N + A + ++E +N P
Sbjct: 477 LRDYSKTYARAKYFDELKPWNERCDVAFPCASQNEVDQADAINLVNAGCRLLVEGSNMPC 536
Query: 316 DPEADEILSKKGVLILPDILANSGGVTVSYFEWVQNIQGFMWDEEKVNNELKTYMTRGF 374
EA ++ K VLI P I A +GGV E ++ W E + L+ + + +
Sbjct: 537 TAEAVDVFRKANVLIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFESRLQEALKQTY 595
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,211,341
Number of extensions: 406492
Number of successful extensions: 910
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 909
Number of HSP's successfully gapped: 4
Length of query: 411
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 310
Effective length of database: 8,337,553
Effective search space: 2584641430
Effective search space used: 2584641430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)