BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0792900 Os03g0792900|AK102503
(160 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162 135 1e-32
AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169 132 7e-32
AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164 129 5e-31
AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176 127 2e-30
AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171 119 9e-28
AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177 118 1e-27
AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174 115 7e-27
AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161 99 7e-22
AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131 94 3e-20
AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126 92 9e-20
>AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162
Length = 161
Score = 135 bits (340), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 91/162 (56%), Gaps = 13/162 (8%)
Query: 10 AEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTP 69
AEE TPE LCVNNCGFFGS T N+CS CY D +SLS P
Sbjct: 2 AEEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS--P 59
Query: 70 LVTEVTDGGSGS--VADGKQVMEE-------DTPKPPS--NRCLSCRKKVGLTGFKCRCG 118
++ V + + + K+ E+ + P PP NRC CRK+VGLTGF CRCG
Sbjct: 60 VIAPVLENYAAELEIPTTKKTEEKKPIQIPTEQPSPPQRPNRCTVCRKRVGLTGFMCRCG 119
Query: 119 GTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
TFC HRY + H CTFD+K GRE+IAK NPLV A K+ KI
Sbjct: 120 TTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161
>AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169
Length = 168
Score = 132 bits (332), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 9 EAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSST 68
E ++ +P P LCV CGFFGS N+CSKCYRD SL+
Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPN 63
Query: 69 PLVT------EVTDG-------GSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKC 115
T E+T G S + D PK + RCLSC KKVG+TGFKC
Sbjct: 64 KPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGFKC 123
Query: 116 RCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
RCG TFC HRY +SH+C FD+K V RE IAK NP+VKADK+ +I
Sbjct: 124 RCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168
>AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164
Length = 163
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 16/160 (10%)
Query: 16 HTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXX--------------- 60
H + P LC NNCGFFGS T+N+CSKC+RD
Sbjct: 5 HRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSS 64
Query: 61 PLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGT 120
E+ + S A + E D P RCL+CR++VG+TGF+CRCG
Sbjct: 65 VSPPPPPPADSKEIVEAKSEKRA-AAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFV 123
Query: 121 FCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
FC HRYA+ H+C+FD+K++G+++IAK NP+VKADK+ KI
Sbjct: 124 FCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163
>AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176
Length = 175
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 84/163 (51%), Gaps = 20/163 (12%)
Query: 18 PEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASL-----------S 66
P P LC N CGFFGS N+CSKCYR SL
Sbjct: 13 PTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQ 72
Query: 67 STPL---------VTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRC 117
PL V + S VA + E P P+NRC SC KKVG+ GFKC+C
Sbjct: 73 KHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKC 132
Query: 118 GGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
G TFC HRY + H+C+FD+K+VGR+ IAK NPLVKADK+ +I
Sbjct: 133 GSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175
>AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171
Length = 170
Score = 119 bits (297), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 91/170 (53%), Gaps = 20/170 (11%)
Query: 10 AEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTP 69
AEE TPE+ LCVNNCGF GS T N+CS CY D + S S
Sbjct: 2 AEEHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVS 61
Query: 70 LVTEVTDGGSGS--------------VADGKQVM-----EEDTPKPPSNRCLSCRKKVGL 110
+ + S V + K V+ E++ + P NRC +CRK+VGL
Sbjct: 62 PPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRP-NRCTTCRKRVGL 120
Query: 111 TGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
TGFKCRCG FC +HRY + H C++D+K GRE+IAK NPLVKA K+ KI
Sbjct: 121 TGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
>AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177
Length = 176
Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 21 PILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTP----------- 69
P LCV CGFFGS ++CSKCYR S +P
Sbjct: 19 PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPA 78
Query: 70 LVTEVTDGGSGSVA-----DGKQVMEEDTPKPPS--NRCLSCRKKVGLTGFKCRCGGTFC 122
+V E + V V E + P P+ NRCL C KKVG+ GFKC+CG TFC
Sbjct: 79 VVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFC 138
Query: 123 SMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
HRY ++H C+FD+K+VGR +IAK NP+VKADKI +
Sbjct: 139 GEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176
>AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174
Length = 173
Score = 115 bits (289), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 18 PEAPILCVNNCGFFGSRMTENMCSKCYRDXXXXXXX--------------------XXXX 57
PE P LC NNCGFFGS T NMCSKC++D
Sbjct: 12 PEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTA 71
Query: 58 XXXPLASLSSTPLVTEVTDGGSGSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRC 117
+ + S P+ V VA+ E PK PS RC +C K+VGLTGFKCRC
Sbjct: 72 ALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPS-RCTTCNKRVGLTGFKCRC 130
Query: 118 GGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160
G FC HRYAD H C+F+Y +E IAK NP+VKA+K+ KI
Sbjct: 131 GSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
>AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161
Length = 160
Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 29 GFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPL------ASLSSTPLVTEVTDGGSGSV 82
G + T NMC KC+ L +L S+P + +V
Sbjct: 31 GVTANPATNNMCQKCFNASLVSAAAGVVESGSILKRSARSVNLRSSPAKVVIRPREIDAV 90
Query: 83 ADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGR 142
Q + NRC CRKKVGLTGF+CRCG FCS HRY+D H C++DYK GR
Sbjct: 91 KKRDQQI--------VNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGR 142
Query: 143 EQIAKQNPLVKADKITKI 160
E IA++NP+VKA K+ K+
Sbjct: 143 EAIARENPVVKAAKMVKV 160
>AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131
Length = 130
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 24 CVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLSSTPLVT---EVTDGGSG 80
C CG +G+R+ N+CS CY+ + L +P + E
Sbjct: 10 CEGGCGLYGTRVNNNLCSLCYKK----------------SVLQHSPALRFEPETEQSQCC 53
Query: 81 SVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQV 140
+ V EE K RC C++KVG+ GFKCRCG FC HRY + H C FDYKQ
Sbjct: 54 PPTNSPAVEEEPVKK---RRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQS 110
Query: 141 GREQIAKQNPLVKADKITKI 160
GR +A Q PL++ADK+ +
Sbjct: 111 GRLALATQLPLIRADKLQRF 130
>AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126
Length = 125
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 72/141 (51%), Gaps = 21/141 (14%)
Query: 21 PILCVNNCGFFGSRMTENMCSKCYRDXXXXXXXXXXXXXXPLASLS-STPLVTEVTDGGS 79
P LC+ CGFF + T+N+CSKCY D LA+ + +T EVT
Sbjct: 5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARY------LATFNVNTKAAEEVT---- 54
Query: 80 GSVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQ 139
+E T C +C+KKVGL GF CRCG F + HRY + H C DYK
Sbjct: 55 ---------AQEATVLGSKGGC-ACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKS 104
Query: 140 VGREQIAKQNPLVKADKITKI 160
+ +AKQNP+VK DK+ ++
Sbjct: 105 AAIDVLAKQNPVVKGDKLFRL 125
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,750,388
Number of extensions: 142941
Number of successful extensions: 323
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 10
Length of query: 160
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 69
Effective length of database: 8,611,713
Effective search space: 594208197
Effective search space used: 594208197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 107 (45.8 bits)