BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0792400 Os03g0792400|AK064808
         (552 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35220.1  | chr5:13484606-13487546 REVERSE LENGTH=549          640   0.0  
AT5G35210.1  | chr5:13474499-13482238 REVERSE LENGTH=1707         219   3e-57
AT5G05740.1  | chr5:1724023-1726859 REVERSE LENGTH=557            133   3e-31
AT1G17870.1  | chr1:6150036-6152185 REVERSE LENGTH=574            105   6e-23

>AT5G35220.1 | chr5:13484606-13487546 REVERSE LENGTH=549
          Length = 548

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/436 (71%), Positives = 368/436 (84%), Gaps = 4/436 (0%)

Query: 117 EPPFLSFSVDNIDTVKLLELLGPEKVDSADVKAIKEKLFGYTTFWLTREEPFGDLGEGVL 176
           +P + SF    ID+ KL+ELLGPEKVD ADVK IK+KLFGY+TFW+T+EEPFGDLGEG+L
Sbjct: 117 DPTYSSF---QIDSFKLMELLGPEKVDPADVKLIKDKLFGYSTFWVTKEEPFGDLGEGIL 173

Query: 177 FIGNLRGKREEIFAKLQQQLRELTGDKYNLFMVEEPNSEGEDPRGGPRVSFGLLRREVSE 236
           F+GNLRGK+E++FAKLQ++L E+  DKYNLFM+EEPNSEG DPRGG RVSFGLLR+EVSE
Sbjct: 174 FLGNLRGKKEDVFAKLQRKLVEVASDKYNLFMIEEPNSEGPDPRGGARVSFGLLRKEVSE 233

Query: 237 PGPTTLWQYVISLLLFLLTVFSCVELGIASKISSLPPEIVTYFTDPNATGPPPDMQLLLP 296
           PGPTTLWQYVI+L+LFLLT+ S VELGIAS+I+ LPPE+V YFTDPNA   PPDM+LL P
Sbjct: 234 PGPTTLWQYVIALILFLLTIGSSVELGIASQINRLPPEVVKYFTDPNAV-EPPDMELLYP 292

Query: 297 FVESALPVAYGVLAIQLFHEVGHFLAAFPKKVKLSIPFFIPNFTLGTFGAITQFKSILPD 356
           FV++ALP+AYGVL I LFHE+GHFLAA PKKVKLSIP+FIPN TLG+FGAITQFKSILPD
Sbjct: 293 FVDAALPLAYGVLGILLFHELGHFLAAVPKKVKLSIPYFIPNITLGSFGAITQFKSILPD 352

Query: 357 KKTMFDISMAGPLAGAALSFSMFSVGLLLSSNPAGASDLVEVPSKLFQGSLLLGLVSRAT 416
           + T  DIS+AGP AGAALS SMF+VGL LS+ P  A+DLV+VPS LFQGSLLLGL+SRAT
Sbjct: 353 RSTKVDISLAGPFAGAALSVSMFAVGLFLSTEPDAANDLVQVPSMLFQGSLLLGLISRAT 412

Query: 417 LGYRAMHAATVAIHPLVIAGWCGLTTTAFNMLPVGCLDGGRALQGAFGKDAXXXXXXXXX 476
           LGY A+HAATV+IHPLVIAGWCGLTTTAFNMLPVGCLDGGRA+QGAFGK+A         
Sbjct: 413 LGYAALHAATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRAVQGAFGKNALVTFGLSTY 472

Query: 477 XXXXXXXXXXXXXXXXXXXVLICQRTPEKPCLNDVSDVGTWRRAALIVSVFLVVLTLIPL 536
                              VLICQRTPEKPCLNDV++VGTWR+A + +++ LVVLTL+P+
Sbjct: 473 VMLGLRVLGGPLALPWGLYVLICQRTPEKPCLNDVTEVGTWRKALVGIALILVVLTLLPV 532

Query: 537 WDELAEDLGVGLVTSF 552
           WDELAE++G+GLVT+F
Sbjct: 533 WDELAEEVGIGLVTTF 548



>AT5G35210.1 | chr5:13474499-13482238 REVERSE LENGTH=1707
          Length = 1706

 Score =  219 bits (558), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 105/130 (80%), Positives = 118/130 (90%)

Query: 338  NFTLGTFGAITQFKSILPDKKTMFDISMAGPLAGAALSFSMFSVGLLLSSNPAGASDLVE 397
            + TLG+FGAITQFKSILPD+ T  DIS+AGP AGAALS SMF+VGL LS+ P  A+DLV+
Sbjct: 1542 SITLGSFGAITQFKSILPDRSTKVDISLAGPFAGAALSVSMFAVGLFLSTEPDAANDLVQ 1601

Query: 398  VPSKLFQGSLLLGLVSRATLGYRAMHAATVAIHPLVIAGWCGLTTTAFNMLPVGCLDGGR 457
            VPS LFQGSLLLGL+SRATLGY A+HAATV+IHPLVIAGWCGLTTTAFNMLPVGCLDGGR
Sbjct: 1602 VPSMLFQGSLLLGLISRATLGYAALHAATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGR 1661

Query: 458  ALQGAFGKDA 467
            A+QGAFGK+A
Sbjct: 1662 AVQGAFGKNA 1671



>AT5G05740.1 | chr5:1724023-1726859 REVERSE LENGTH=557
          Length = 556

 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 172/332 (51%), Gaps = 31/332 (9%)

Query: 134 LELLGPEKVDSADVKAIKEKLFGYTTFWLTREEPFGDLGEGVLFIGNLRGKREEIFAKLQ 193
           L+L    ++    +  ++ ++FG+ TF++T +EP+     GVLF GNLRGK    + K++
Sbjct: 171 LQLDDSMRLPKETIDILRGQVFGFDTFFVTSQEPYEG---GVLFKGNLRGKPATSYEKIK 227

Query: 194 QQLRELTGDKYNLFMVEEPNSEGEDPRGGPRVSFGLLRREVSEPGPTTLWQYVISLLLFL 253
            ++    GD+Y LF++  P  E + P     V+  + RR + EP  T + ++  +    L
Sbjct: 228 TRMENNFGDQYKLFLLTNP--EDDKP-----VAVVVPRRSL-EPETTAVPEWFAAGSFGL 279

Query: 254 LTVFSCVELGIASKISSLPPEIVTYFTDPNATGPPPDMQLLLPFVESALPVAYGVLAIQL 313
           + +F+         + +L  ++++ F +             L  ++  LP A     +  
Sbjct: 280 VALFTL----FLRNVPALQSDLLSAFDN-------------LELLKDGLPGALVTALVLG 322

Query: 314 FHEVGHFLAAFPKKVKLSIPFFIPNFTLGTFGAITQFKSILPDKKTMFDISMAGPLAGAA 373
            HE+GH L A    +KL +PFF+P++ +G+FGAIT+ K+I+  ++ +  ++ AGPLAG +
Sbjct: 323 VHELGHILVANSLGIKLGVPFFVPSWQIGSFGAITRIKNIVAKREDLLKVAAAGPLAGFS 382

Query: 374 LSFSMFSVGLLLSSNPAGASDLVEVPSKLFQGSLLLGLVSRATLGYRAMHAATVAIHPLV 433
           L   +F +GL +   P      V V + +F  S L G +++  LG       +++++PLV
Sbjct: 383 LGLILFLIGLFV---PPSDGIGVVVDASVFHESFLAGGIAKLLLGDALKEGTSISLNPLV 439

Query: 434 IAGWCGLTTTAFNMLPVGCLDGGRALQGAFGK 465
           I  W GL     N +P G LDGG+     +G+
Sbjct: 440 IWAWAGLLINGINSIPAGELDGGKIAFSIWGR 471



>AT1G17870.1 | chr1:6150036-6152185 REVERSE LENGTH=574
          Length = 573

 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 39/337 (11%)

Query: 140 EKVDSADVKAIKEKLFGYTTFWLTREEPFGDLGEGVLFIGNLRGKREEIFAKLQQQLREL 199
           E   + D+  +K   FG+ TF+ T    FGD   G +FIGNLR   +E+  KL+ +L E 
Sbjct: 173 ETFKALDLNKLK-SCFGFDTFFATDVRRFGD---GGIFIGNLRKPIDEVTPKLEAKLSEA 228

Query: 200 TGDKYNLFMVEEPNSE--GEDPRGGPRVSFGLLRREVSEPGPTTLWQYVISLLLFLLTVF 257
            G    ++ +EE ++E   +     P+    L   +      +T W YV ++ L  +T F
Sbjct: 229 AGRDVVVWFMEERSNEITKQVCMVQPKAEIDL---QFESTRLSTPWGYVSAIAL-CVTTF 284

Query: 258 SCVELGIASKISSLPPEIVTYFTDPNATGPPPDMQLLLPFVESALPVAYGVLAIQLFHEV 317
             + L            +  +F  P+AT           ++ + +P+  G L+I    E+
Sbjct: 285 GTIAL------------MSGFFLKPDAT--------FDDYIANVVPLFGGFLSILGVSEI 324

Query: 318 GHFLAAFPKKVKLSIPFFIPNFTLGTFGAITQFKSILPDKKTMFDISMAGPLAGAALSFS 377
              + A    VKLS  F +P+   G  G +  ++S+LP+KK +FDI +A   +    S  
Sbjct: 325 ATRVTAARHGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLL 384

Query: 378 MFSVGLLLSSNPAGASDLVEVPSKLFQGSLLLGLVSRATLGY---------RAMHAATVA 428
           + +   +   +  G  + + +  + F  + LL  V      Y          A+    V 
Sbjct: 385 LAAAAFISDGSFNGGDNALYIRPQFFDNNPLLSFVQFVVGPYADDLGNVLPNAVEGVGVP 444

Query: 429 IHPLVIAGWCGLTTTAFNMLPVGCLDGGRALQGAFGK 465
           + PL  AG  G+  T+ N+LP G L+GGR  Q  FG+
Sbjct: 445 VDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGR 481



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.140    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,409,681
Number of extensions: 403137
Number of successful extensions: 956
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 947
Number of HSP's successfully gapped: 4
Length of query: 552
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 448
Effective length of database: 8,255,305
Effective search space: 3698376640
Effective search space used: 3698376640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)