BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0788800 Os03g0788800|AK071670
(372 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22000.2 | chr5:7277436-7279553 FORWARD LENGTH=376 325 3e-89
AT4G14220.1 | chr4:8196012-8198240 FORWARD LENGTH=372 118 6e-27
AT5G15790.1 | chr5:5149800-5150964 FORWARD LENGTH=233 59 5e-09
AT3G02290.1 | chr3:459385-460688 FORWARD LENGTH=232 58 9e-09
AT4G00335.1 | chr4:146866-147962 FORWARD LENGTH=191 57 1e-08
AT5G38895.3 | chr5:15571302-15573315 FORWARD LENGTH=327 55 5e-08
AT4G23450.2 | chr4:12241113-12242190 REVERSE LENGTH=209 55 7e-08
AT5G41350.1 | chr5:16542026-16543092 REVERSE LENGTH=213 54 9e-08
AT3G58720.2 | chr3:21716920-21717908 REVERSE LENGTH=267 53 2e-07
AT1G32361.1 | chr1:11675531-11676529 FORWARD LENGTH=333 53 3e-07
AT1G18780.1 | chr1:6476258-6477235 REVERSE LENGTH=326 52 7e-07
AT1G14200.1 | chr1:4854532-4855071 REVERSE LENGTH=180 51 1e-06
AT3G15070.1 | chr3:5070472-5072344 REVERSE LENGTH=487 50 2e-06
AT5G24870.1 | chr5:8545008-8546923 REVERSE LENGTH=521 50 2e-06
AT2G03000.1 | chr2:875233-877207 FORWARD LENGTH=536 50 2e-06
AT3G19910.1 | chr3:6926497-6929324 FORWARD LENGTH=341 50 3e-06
AT5G10650.1 | chr5:3365237-3367263 REVERSE LENGTH=526 49 3e-06
AT4G12140.1 | chr4:7266546-7267154 REVERSE LENGTH=203 49 5e-06
AT5G42940.1 | chr5:17216649-17219171 REVERSE LENGTH=692 49 6e-06
AT1G72310.1 | chr1:27226405-27227379 FORWARD LENGTH=325 49 6e-06
AT4G26400.2 | chr4:13344953-13346023 REVERSE LENGTH=357 49 6e-06
>AT5G22000.2 | chr5:7277436-7279553 FORWARD LENGTH=376
Length = 375
Score = 325 bits (832), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/323 (52%), Positives = 208/323 (64%), Gaps = 10/323 (3%)
Query: 8 ESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQC 67
E L+SAAAFVEGG+QDACDDACSICLE+FC++DPST+TSCKHEYHLQCILEWCQRSSQC
Sbjct: 11 EGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQC 70
Query: 68 PMCWQPISMKDPMSQELLEAVEQERNIRANRLNTAAVFHHPVLGDFE---VPVGADDAEL 124
PMCWQ IS+KDP SQELLEAVEQERN R N A +F HP LGDFE +PVG D+AE+
Sbjct: 71 PMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVDNAEI 130
Query: 125 EERIIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQIVVFSRNEAIPGGSLHASSGQDE 184
EERIIQ Q +VFS H
Sbjct: 131 EERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPPMPSSP 190
Query: 185 DHEQSSDLGSAHPFAALAAVDQGHMSGGSQLYVGHSDQGASNPSLHDERAMSRTSENQSA 244
SD S P AL + H S H Q + + S + R + NQS+
Sbjct: 191 SQRDESDTVSNLPHNALG--EGSHQSNTQPPTSSHPRQVSPSASDSNSRPL-----NQSS 243
Query: 245 PVNQDTAGPSDLQSFSDTLRSRLQSASMKYKDSITKSTRGWKERWFSRSNTISGLGTEVR 304
P QD AGPS+LQSFS++L+SRL + S +YK+SI+K+TR WK+R FSR+ +++ LG+EV+
Sbjct: 244 PSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLGSEVK 303
Query: 305 REVNAGIAAVSRMMERLETKDDT 327
REV+AGIA VSRMMERLET++++
Sbjct: 304 REVSAGIATVSRMMERLETRENS 326
>AT4G14220.1 | chr4:8196012-8198240 FORWARD LENGTH=372
Length = 371
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 57/69 (82%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLE 86
DDACSICLE F DPSTVTSCKHEYHLQCI+EW QRS +CP+CWQ ++DP SQELL
Sbjct: 43 DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102
Query: 87 AVEQERNIR 95
AVE+ER ++
Sbjct: 103 AVEKERLLK 111
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 258 SFSDTLRSRLQSASMKYKDSITKSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRM 317
S + ++S+L +AS KYK+SI+KS +G KE+ +R+N++ L V+RE+NAGIA V+RM
Sbjct: 252 SLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGVARM 311
Query: 318 MERLE 322
+ER++
Sbjct: 312 IERMD 316
>AT5G15790.1 | chr5:5149800-5150964 FORWARD LENGTH=233
Length = 232
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
+D C CLE + +P VT C H +HL CI EW +RS CP+C
Sbjct: 179 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVC 222
>AT3G02290.1 | chr3:459385-460688 FORWARD LENGTH=232
Length = 231
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
+D C CLE + +P VT C H +HL CI EW +RS CP+C
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221
>AT4G00335.1 | chr4:146866-147962 FORWARD LENGTH=191
Length = 190
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKD 78
+D C IC E + +P T C+HE+HL C+LEW +RS +CP+C + + D
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>AT5G38895.3 | chr5:15571302-15573315 FORWARD LENGTH=327
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
+D C CL+ + +P +T C H +HL CI EW +RS CP+C
Sbjct: 271 EDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVC 314
>AT4G23450.2 | chr4:12241113-12242190 REVERSE LENGTH=209
Length = 208
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 28 DACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
D C ICLE + ++P +T C H++HL CIL W +RS CP+C
Sbjct: 157 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 199
>AT5G41350.1 | chr5:16542026-16543092 REVERSE LENGTH=213
Length = 212
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 30 CSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
C ICLE + +P V C H +HL CILEW +RS CP+C
Sbjct: 161 CPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVC 201
>AT3G58720.2 | chr3:21716920-21717908 REVERSE LENGTH=267
Length = 266
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
D CS+CLE F + +T CKH +H +CI+ W + QCP+C
Sbjct: 169 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVC 212
>AT1G32361.1 | chr1:11675531-11676529 FORWARD LENGTH=333
Length = 332
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 3 EKVKMESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDP-STVTSCKHEYHLQCILEWC 61
E + ++SK+ + V+D D CSICL F D+D +++C H +H CI W
Sbjct: 127 ENLGLDSKIIESFPEYPYSVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWF 186
Query: 62 QRSSQCPMCWQPISMKDPMSQE 83
+ CP+C + + ++D S E
Sbjct: 187 EGHKTCPVCRRELDVEDRTSLE 208
>AT1G18780.1 | chr1:6476258-6477235 REVERSE LENGTH=326
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
+D C+ICLE F D C HE+ +C+LEW RS CP+C
Sbjct: 274 NDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLC 317
>AT1G14200.1 | chr1:4854532-4855071 REVERSE LENGTH=180
Length = 179
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 7 MESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQ 66
++S++ + V G ++ +C+ICL+ + D + CKH++H +C+ EW R +
Sbjct: 86 LKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHAT 145
Query: 67 CPMC 70
CPMC
Sbjct: 146 CPMC 149
>AT3G15070.1 | chr3:5070472-5072344 REVERSE LENGTH=487
Length = 486
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 2 DEKVKMESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWC 61
D K ++ + S+ EG D D+C+IC E + + D C H+YH +C+ +W
Sbjct: 400 DVKELLKRRTSTRINLEEGPSTDLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWL 459
Query: 62 QRSSQCPMC 70
+ CP+C
Sbjct: 460 VIKNVCPIC 468
>AT5G24870.1 | chr5:8545008-8546923 REVERSE LENGTH=521
Length = 520
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
D CSIC E + D D C+H+YH+ C +W + + CP+C
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>AT2G03000.1 | chr2:875233-877207 FORWARD LENGTH=536
Length = 535
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 15 AAFVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
A VE G C IC E + +D T CKH+YHL+C+ +W + + CP C
Sbjct: 473 VAMVEKG-------ECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQC 521
>AT3G19910.1 | chr3:6926497-6929324 FORWARD LENGTH=341
Length = 340
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 17 FVEGGVQDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMCWQPIS 75
+ EG Q+ +++C IC + D++ + CKH YH +CI W + + CP+C +S
Sbjct: 275 YKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVS 333
>AT5G10650.1 | chr5:3365237-3367263 REVERSE LENGTH=526
Length = 525
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 27 DDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
D CSIC E + D D C+H YH+ C+ +W + + CP+C
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPIC 515
>AT4G12140.1 | chr4:7266546-7267154 REVERSE LENGTH=203
Length = 202
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 28 DACSICLEAFCDNDPS--TVTSCKHEYHLQCILEWCQRSSQCPMC 70
D+CSICL++ + + T SC H +H C++EW +R + CPMC
Sbjct: 151 DSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMC 195
>AT5G42940.1 | chr5:17216649-17219171 REVERSE LENGTH=692
Length = 691
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 23 QDACDDACSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
QDA + C +C E + + + C HE+H QCI EW ++ + CP+C
Sbjct: 632 QDA--EPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677
>AT1G72310.1 | chr1:27226405-27227379 FORWARD LENGTH=325
Length = 324
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 23 QDACDDA--CSICLEAFCDNDPS-TVTSCKHEYHLQCILEWCQRSSQCPMC 70
QD+C D CSICL D + + C H +H++CI W Q S CP+C
Sbjct: 118 QDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPIC 168
>AT4G26400.2 | chr4:13344953-13346023 REVERSE LENGTH=357
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 30 CSICLEAFCDNDPSTVTSCKHEYHLQCILEWCQRSSQCPMC 70
CSICL+ F + CKH++H++CI+ W + S CP+C
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVC 281
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.126 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,722,329
Number of extensions: 247709
Number of successful extensions: 926
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 999
Number of HSP's successfully gapped: 35
Length of query: 372
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,364,969
Effective search space: 2275271568
Effective search space used: 2275271568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 112 (47.8 bits)