BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0788600 Os03g0788600|AK069046
(474 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446 525 e-149
AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437 520 e-148
AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459 514 e-146
AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463 485 e-137
AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126 113 2e-25
>AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446
Length = 445
Score = 525 bits (1353), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/425 (63%), Positives = 307/425 (72%), Gaps = 15/425 (3%)
Query: 52 INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
INSNSVLVALLDSHYT QTLE+AVGKHN+TIFAPRN+ALER+LDP FK
Sbjct: 34 INSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKS 93
Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSAVSHP--TLSGEEVELAAAANDGAMRVAHA 169
FLLEPRNLKSLQSLL+FH+LP R+ S W ++SH TLS + + L N ++V A
Sbjct: 94 FLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTVDVN--TLKVDSA 151
Query: 170 AVTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRXXX 229
+ RPD V+RPDG+IHGIERLL+PRSVQEDFNRRRSL ISAV+P GAPEVDPRTHR
Sbjct: 152 EIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKK 211
Query: 230 XXXXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYN 289
I+DAM + HF+G +QVKDFI TLL YGGYN
Sbjct: 212 PSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYN 271
Query: 290 ELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIP 349
E+ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH+IP
Sbjct: 272 EMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIP 331
Query: 350 EYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRI 409
EYQTEESMYNAVRRFGKV+YD+LR PHKV+A+EADGSVKFGHG+GSAYLFDPDIYTDGRI
Sbjct: 332 EYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRI 391
Query: 410 AVQGIDAVLFPPDDTKTAPDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQMAGILGQRLR 469
+VQGID VLFP ++T P T AP V E C+M G R
Sbjct: 392 SVQGIDGVLFPKEET---PATEIKPAAPVVKKV---SKSRRGKLMEVACRMMGS-----R 440
Query: 470 FASCQ 474
F CQ
Sbjct: 441 FIPCQ 445
>AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437
Length = 436
Score = 520 bits (1340), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/425 (61%), Positives = 304/425 (71%), Gaps = 20/425 (4%)
Query: 52 INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
INSNSVLVALLDSHYT QTLE+AVG+HN+TIFAPRN+ALE++LDPEFK
Sbjct: 30 INSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKS 89
Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSA--VSHPTLSGEEVELAAAANDGAMRVAHA 169
FLL+P+NLKSLQSLL+FH+LP R+ S +S+ VSH TLS + + +V A
Sbjct: 90 FLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFTNG------KVNSA 143
Query: 170 AVTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHRXXX 229
+T+PD + RPDG+IHGIERLL+PRSVQEDFNRRRSL I+AVLP GAPEVDPRTHR
Sbjct: 144 EITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKK 203
Query: 230 XXXXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYN 289
++DAM +HHF+G +QVKDFI TLL YGGYN
Sbjct: 204 KPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYN 263
Query: 290 ELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIP 349
E+ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH+IP
Sbjct: 264 EMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIP 323
Query: 350 EYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTDGRI 409
EYQTEESMYN+VRRFGK+RYD+LR PHKV A+EADGSVKFGHG+GSAYLFDPDIYTDGRI
Sbjct: 324 EYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRI 383
Query: 410 AVQGIDAVLFPPDDTKTAPDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQMAGILGQRLR 469
+VQGID VLFP + T PV + V E C M G +
Sbjct: 384 SVQGIDGVLFPEEKT-------PVEKKTGVPVVKKAPKPRRGKLMEVACTMLGS-----Q 431
Query: 470 FASCQ 474
F +CQ
Sbjct: 432 FPTCQ 436
>AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459
Length = 458
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 263/428 (61%), Positives = 298/428 (69%), Gaps = 16/428 (3%)
Query: 52 INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
INSNSVLVALLDS YT QTLEDAVG+HN+TIFAPRNEALERDLDPEFKR
Sbjct: 42 INSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKR 101
Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSWSA-----VSHPTLSGEEVELAAAANDGAMRV 166
FLLEP NLKSLQ+LL+FH++P R+ S W + V H TL ++V L+ G V
Sbjct: 102 FLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNG--QGKKMV 159
Query: 167 AHAAVTRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRTHR 226
A + RPD + RPDG+IHGIERLL+PRSVQEDFNRRRSL ISAVLP GAPEVDPRT+R
Sbjct: 160 DLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNR 219
Query: 227 XXXXXXXXXXXXXXXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYG 286
I AM +HHFDG +QVKDFI TLL YG
Sbjct: 220 LKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHYG 279
Query: 287 GYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYH 346
GYNE+ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH
Sbjct: 280 GYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIVYYH 339
Query: 347 MIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPDIYTD 406
+IPEYQTEESMYN+VRRFGKV++DTLR PHKV A+EADGSVKFG GE SAYLFDPDIYTD
Sbjct: 340 IIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTD 399
Query: 407 GRIAVQGIDAVLFPPDDTKTAPDTAPVRRAPAVTGTXXXXXXXXXXXXEATCQMAGILGQ 466
GRI+VQGID VLFP ++ PV++ E C M G G+
Sbjct: 400 GRISVQGIDGVLFPQEEEVVESVKKPVKK---------IVQPRRGKLLEVACSMLGAFGK 450
Query: 467 RLRFASCQ 474
+ C+
Sbjct: 451 DTYLSKCR 458
>AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463
Length = 462
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/433 (59%), Positives = 297/433 (68%), Gaps = 20/433 (4%)
Query: 52 INSNSVLVALLDSHYTXXXXXXXXXXXXQTLEDAVGKHNVTIFAPRNEALERDLDPEFKR 111
INSNSVLVALLDS YT QTLEDAVG+HN+TIFAPRNEALERDLDP+FKR
Sbjct: 39 INSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKR 98
Query: 112 FLLEPRNLKSLQSLLLFHVLPARLPSGSW-----SAVSHPTLSGEEV-ELAAAANDGAMR 165
FLL+P NLKSLQ+LLL H++P R+ S W V H TL ++V L+ R
Sbjct: 99 FLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTNGKR 158
Query: 166 VAHAAV-TRPDAVLRPDGVIHGIERLLVPRSVQEDFNRRRSLADISAVLPTGAPEVDPRT 224
+ ++AV TRPD + RPDG+IHGIERLL+PRSVQEDFNRRR+L ISAVLP GAPE+DPRT
Sbjct: 159 LVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRT 218
Query: 225 HRXXXXXXXXXXXXXX--XXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTL 282
+R I AM HF+G +QVKDFI TL
Sbjct: 219 NRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTL 278
Query: 283 LLYGGYNELADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENI 342
L YGGYNE+ADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAM +LTTDQLSEPG+PE I
Sbjct: 279 LHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQI 338
Query: 343 LYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFGHGEGSAYLFDPD 402
+YYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG G+ SAYLFDPD
Sbjct: 339 MYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPD 398
Query: 403 IYTDGRIAVQGIDAVLFPPDDTKTAPD--TAPVRRAPAVTGTXXXXXXXXXXXXEATCQM 460
IYTDGRI+VQGID VLFP + + T PV++ E C M
Sbjct: 399 IYTDGRISVQGIDGVLFPEEKEEETVKKPTGPVKKV---------VQPRRGKLLEVACSM 449
Query: 461 AGILGQRLRFASC 473
G +G+ + C
Sbjct: 450 LGAIGKDSYLSRC 462
>AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126
Length = 125
Score = 113 bits (282), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 331 DQLSEPGSPENILYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAREADGSVKFG 390
DQLSE + I YYH+IPEYQTE+S Y VRR G +++DT PH + ARE S+KFG
Sbjct: 2 DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 57
Query: 391 HGEGSAYLFDPDIYTDGRIAVQGIDAVLFP 420
G S L+DPDIYTDG+I++QG+ VLFP
Sbjct: 58 DGVWSGCLYDPDIYTDGKISIQGVGGVLFP 87
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,944,288
Number of extensions: 297312
Number of successful extensions: 680
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 671
Number of HSP's successfully gapped: 5
Length of query: 474
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 372
Effective length of database: 8,310,137
Effective search space: 3091370964
Effective search space used: 3091370964
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)