BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0787000 Os03g0787000|AK065950
(330 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11820.1 | chr3:3729540-3730868 REVERSE LENGTH=347 325 3e-89
AT1G61290.1 | chr1:22605188-22606216 FORWARD LENGTH=304 318 2e-87
AT1G11250.1 | chr1:3768724-3769706 FORWARD LENGTH=299 318 3e-87
AT4G03330.1 | chr4:1466525-1467605 FORWARD LENGTH=306 285 3e-77
AT3G52400.1 | chr3:19425835-19427032 REVERSE LENGTH=342 283 9e-77
AT3G03800.1 | chr3:969314-971460 FORWARD LENGTH=307 221 3e-58
AT5G08080.3 | chr5:2588532-2591106 FORWARD LENGTH=316 196 1e-50
AT1G08560.1 | chr1:2709778-2710710 REVERSE LENGTH=311 194 4e-50
AT2G18260.1 | chr2:7942275-7943192 FORWARD LENGTH=306 162 3e-40
AT5G46860.1 | chr5:19012342-19013795 REVERSE LENGTH=269 66 2e-11
>AT3G11820.1 | chr3:3729540-3730868 REVERSE LENGTH=347
Length = 346
Score = 325 bits (832), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 193/246 (78%)
Query: 41 SLDRFFEDVESIKDELRDLERIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXX 100
+LD+FFEDVES+K+EL++L+R+ +L +E K+LH+A AV+ LR++MD D
Sbjct: 43 NLDKFFEDVESVKEELKELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKA 102
Query: 101 XXXXLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISS 160
++LE+LDRANAANRS+PGCGPGSS+DRTRTSV+ GLRKKL DSM+SF+ LR ISS
Sbjct: 103 KMIKVKLEALDRANAANRSLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISS 162
Query: 161 EYRETVARRYYTVTGEQPDEATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHG 220
EYRETV RRY+TVTGE PDE TLD L TGE ERFLQ+AI EQGRG VL + EIQERH
Sbjct: 163 EYRETVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHD 222
Query: 221 AVAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKS 280
AV ++E++L ELHQVF DMAVLV QG QLDDIE+HVGRA SF+ G +QL AR +QK+
Sbjct: 223 AVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKN 282
Query: 281 TRKWTC 286
TRKWTC
Sbjct: 283 TRKWTC 288
>AT1G61290.1 | chr1:22605188-22606216 FORWARD LENGTH=304
Length = 303
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/288 (53%), Positives = 207/288 (71%), Gaps = 9/288 (3%)
Query: 1 MNNLFSSSWKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDRFFEDVESIKDELRDLE 60
MN+LFSSS+K+ +LD+FFEDVE++KD ++ +E
Sbjct: 1 MNDLFSSSFKK---------YTDLKQQAQMDDIESGKETMNLDKFFEDVENVKDNMKGVE 51
Query: 61 RIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXXXXXXLRLESLDRANAANRSV 120
+ +SL D+NE K++H+A V+ LRA+MD D +LE+L++ANA +R+V
Sbjct: 52 TLYKSLQDSNEECKTVHNAKKVKELRAKMDGDVAQVLKRVKMIKQKLEALEKANANSRNV 111
Query: 121 PGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISSEYRETVARRYYTVTGEQPDE 180
GCGPGSSTDRTRTSVV+GL KKL+D M+SF LRAR+++EY+ETV RRY+T+TGEQ DE
Sbjct: 112 SGCGPGSSTDRTRTSVVSGLGKKLKDLMDSFQGLRARMNAEYKETVERRYFTITGEQADE 171
Query: 181 ATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHGAVAELERSLLELHQVFNDMA 240
T++NL +GE E FLQ+AI EQGRG++L ++EIQERH AV E+E++L+ELHQVF DMA
Sbjct: 172 QTIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMA 231
Query: 241 VLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKSTRKWTCIA 288
LV +QG+QL+DIE+HV +A SFV RG +QL AR++QKS+RKWTC A
Sbjct: 232 ALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTCYA 279
>AT1G11250.1 | chr1:3768724-3769706 FORWARD LENGTH=299
Length = 298
Score = 318 bits (814), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/288 (52%), Positives = 208/288 (72%), Gaps = 14/288 (4%)
Query: 1 MNNLFSSSWKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDRFFEDVESIKDELRDLE 60
MN+LFS+S+K+ +LD+FFEDVE++KD+++ +E
Sbjct: 1 MNDLFSNSFKKNQAQLGDVEAGQETM--------------NLDKFFEDVENVKDDMKGVE 46
Query: 61 RIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXXXXXXLRLESLDRANAANRSV 120
+ + L D+NE K++H+A V+ LRA+MD D +LE+L++ANA +R+V
Sbjct: 47 ALYKKLQDSNEECKTVHNAKKVKELRAKMDGDVAMVLKRVKIIKQKLEALEKANANSRNV 106
Query: 121 PGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISSEYRETVARRYYTVTGEQPDE 180
PGCGPGSSTDRTR+SVV+GL KKL+D M+SF LRAR+++EY+ETV RRY+T+TGE+ DE
Sbjct: 107 PGCGPGSSTDRTRSSVVSGLGKKLKDLMDSFQGLRARMNNEYKETVERRYFTITGEKADE 166
Query: 181 ATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHGAVAELERSLLELHQVFNDMA 240
T+DNL +GE E FLQ+AI EQGRG++L ++EIQERH AV E+E++LLELHQVF DMA
Sbjct: 167 QTIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMA 226
Query: 241 VLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKSTRKWTCIA 288
LV AQG+QL++IE+HV +A SFV RG +QL AR++QKS+RKWTC A
Sbjct: 227 ALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYA 274
>AT4G03330.1 | chr4:1466525-1467605 FORWARD LENGTH=306
Length = 305
Score = 285 bits (728), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 193/288 (67%), Gaps = 6/288 (2%)
Query: 1 MNNLFSSSWKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDRFFEDVESIKDELRDLE 60
MN+L SSS+KR +LD FF VES+K++++ ++
Sbjct: 1 MNDLISSSFKR------YTDLNHQVQLDDIESQNVSLDSGNLDEFFGYVESVKEDMKAVD 54
Query: 61 RIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXXXXXXLRLESLDRANAANRSV 120
I + L DANE K++HD+ AV+ LRARMD+ +L +L+++NAA R V
Sbjct: 55 EIHKRLQDANEESKTVHDSKAVKKLRARMDSSVTEVLKRVKMIKTKLVALEKSNAAQRKV 114
Query: 121 PGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISSEYRETVARRYYTVTGEQPDE 180
GCGPGSS DRTRTSVV+GL KKL+D M+ F LR ++++EY+ETV RRY+TVTG++ DE
Sbjct: 115 AGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQRLRTKMATEYKETVERRYFTVTGQKADE 174
Query: 181 ATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHGAVAELERSLLELHQVFNDMA 240
T++ L +GE ERFLQ+AI EQGRG+V+ ++EIQERH V E+ERSLLELHQVF DMA
Sbjct: 175 ETVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMA 234
Query: 241 VLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKSTRKWTCIA 288
LV AQG L+DIE++V +A SFV RG +QL A+ Q++ RKW CIA
Sbjct: 235 ALVEAQGNMLNDIESNVSKASSFVMRGTDQLHGAKVLQRNNRKWACIA 282
>AT3G52400.1 | chr3:19425835-19427032 REVERSE LENGTH=342
Length = 341
Score = 283 bits (724), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/248 (57%), Positives = 179/248 (72%)
Query: 41 SLDRFFEDVESIKDELRDLERIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXX 100
+LD FF DVE + ++L++L+R+ +L +NE K+LH+A AV+ L+ +MDAD
Sbjct: 42 NLDTFFLDVEVVNEDLKELDRLCHNLRSSNEQSKTLHNANAVKELKKKMDADVTAALKTA 101
Query: 101 XXXXLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISS 160
LE+LDRAN NRS+P GPGSS+DR RTSVV GLRKKL+D ME FS +R I++
Sbjct: 102 RRLKGNLEALDRANEVNRSLPESGPGSSSDRQRTSVVNGLRKKLKDEMEKFSRVRETITN 161
Query: 161 EYRETVARRYYTVTGEQPDEATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHG 220
EY+ETV R +TVTGE PDEATL+ L TGE E FLQ+AI EQGRG +L + EIQERH
Sbjct: 162 EYKETVGRMCFTVTGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHD 221
Query: 221 AVAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKS 280
AV ++E+SL ELHQVF DMAVLV QG QLDDIE +V RA S V G ++LV AR +QK+
Sbjct: 222 AVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRANSLVRSGADRLVKARFYQKN 281
Query: 281 TRKWTCIA 288
TRKWTC A
Sbjct: 282 TRKWTCFA 289
>AT3G03800.1 | chr3:969314-971460 FORWARD LENGTH=307
Length = 306
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 153/245 (62%)
Query: 42 LDRFFEDVESIKDELRDLERIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXXX 101
L FF+ V+ I+ + L++ L A+E K++ A A+++++ RM+ D
Sbjct: 35 LSGFFKKVQEIEKQYEKLDKHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISR 94
Query: 102 XXXLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISSE 161
++E LDR N NR+ PGCG G+ DRTRT+ ++KK +D + F +LR I E
Sbjct: 95 FIKGKIEELDRENLENRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNIQQE 154
Query: 162 YRETVARRYYTVTGEQPDEATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHGA 221
YRE V RR +TVTG++ DE +D L ETG+ E+ Q+AI EQGRG+++ +AEIQERH A
Sbjct: 155 YREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDA 214
Query: 222 VAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKST 281
V +LE+ LL+L QVF DMAVLV AQGE LD+IE V A V G QL A K QKS+
Sbjct: 215 VRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQKSS 274
Query: 282 RKWTC 286
RKW C
Sbjct: 275 RKWMC 279
>AT5G08080.3 | chr5:2588532-2591106 FORWARD LENGTH=316
Length = 315
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 138/218 (63%)
Query: 69 ANEGGKSLHDAAAVRALRARMDADXXXXXXXXXXXXLRLESLDRANAANRSVPGCGPGSS 128
++E KS+ A A++A++ M+ D +LE LDR N ANR PGC GS
Sbjct: 72 SHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARFIKGKLEELDRENLANRQKPGCAKGSG 131
Query: 129 TDRTRTSVVAGLRKKLRDSMESFSSLRARISSEYRETVARRYYTVTGEQPDEATLDNLAE 188
DR+RT+ L+KKL+D M F LR I EYR+ V RR YTVTGE+ DE T+D L E
Sbjct: 132 VDRSRTATTLSLKKKLKDKMAEFQVLRENIQQEYRDVVDRRVYTVTGERADEDTIDELIE 191
Query: 189 TGEGERFLQRAIAEQGRGEVLGVVAEIQERHGAVAELERSLLELHQVFNDMAVLVAAQGE 248
TG E+ Q+AI EQGRG+V+ +AEIQERH AV +LE+ LL+L Q+F DMAVLV AQGE
Sbjct: 192 TGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGE 251
Query: 249 QLDDIETHVGRARSFVDRGREQLVVARKHQKSTRKWTC 286
LD+IE+ V A V G L A+ QK++RKW C
Sbjct: 252 MLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMC 289
>AT1G08560.1 | chr1:2709778-2710710 REVERSE LENGTH=311
Length = 310
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 151/247 (61%), Gaps = 5/247 (2%)
Query: 41 SLDRFFEDVESIKDELRDLERIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXX 100
+L F E+ E +K E+ + + +E K +H A +V++LR ++ +
Sbjct: 44 NLSSFLEEAEYVKAEMGLISETLARIEQYHEESKGVHKAESVKSLRNKISNEIVSGLRKA 103
Query: 101 XXXXLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISS 160
+LE +D+AN + + G + R+RT+V GLRKKL++ M F LR ++ S
Sbjct: 104 KSIKSKLEEMDKANKEIKRLSG----TPVYRSRTAVTNGLRKKLKEVMMEFQGLRQKMMS 159
Query: 161 EYRETVARRYYTVTGEQPDEATLDNL-AETGEGERFLQRAIAEQGRGEVLGVVAEIQERH 219
EY+ETV RRY+TVTGE ++ ++ + + GE FL RAI E G+G+VL V EIQ+R+
Sbjct: 160 EYKETVERRYFTVTGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRY 219
Query: 220 GAVAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQK 279
A E+E+SLLELHQVF DMAV+V +QGEQ+D+IE HV A +V G +L A+ HQ+
Sbjct: 220 DAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHVINASHYVADGANELKTAKSHQR 279
Query: 280 STRKWTC 286
++RKW C
Sbjct: 280 NSRKWMC 286
>AT2G18260.1 | chr2:7942275-7943192 FORWARD LENGTH=306
Length = 305
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 137/244 (56%), Gaps = 7/244 (2%)
Query: 41 SLDRFFEDVESIKDELRDLERIQRSLHDANEGGKSLHDAAAVRALRARMDADXXXXXXXX 100
+L FF+++E+IK + ++ + L + NE KS H +R LR RM+++
Sbjct: 46 NLSGFFQEIETIKTLIEEITHLLLDLQNLNEETKSTHSTKILRGLRDRMESNIVTISRKA 105
Query: 101 XXXXLRLESLDRANAANRSVPGCGPGSSTDRTRTSVVAGLRKKLRDSMESFSSLRARISS 160
+E+L++ N ANR+ GS DRTRTS+ G+RKKLRD+M F LR RI +
Sbjct: 106 NTVKTLIETLEKRNVANRT--SFKEGSCVDRTRTSITNGVRKKLRDTMSEFHRLRERIFA 163
Query: 161 EYRETVARRYYTVTGEQPDEATLDNLAETGEGERFLQRAIAEQGRGEVLGVVAEIQERHG 220
+YRE + R+Y+ TGE+P ++ + L + + ++ + +ERH
Sbjct: 164 DYREDLKRKYFLATGEEPSNEDMEKMISGSGSCSDLVKTFEVKPEMDL-----KTKERHE 218
Query: 221 AVAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLVVARKHQKS 280
AV +++RSL LHQVF DMAVLV QG+++DDIE +V A SFV G L A + +K
Sbjct: 219 AVNDIKRSLNRLHQVFLDMAVLVETQGDRIDDIEANVANAGSFVSGGTNSLYYANQMKKK 278
Query: 281 TRKW 284
T+ W
Sbjct: 279 TKSW 282
>AT5G46860.1 | chr5:19012342-19013795 REVERSE LENGTH=269
Length = 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 213 AEIQERHGAVAELERSLLELHQVFNDMAVLVAAQGEQLDDIETHVGRARSFVDRGREQLV 272
A I+ER + E+ + + E++++F D+AVLV QG +DDI TH+ +R+ +G+ QLV
Sbjct: 176 AVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLV 235
Query: 273 VARKHQKSTRKWTCI 287
A K QKS TC+
Sbjct: 236 QAAKTQKSNSSLTCL 250
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.130 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,898,813
Number of extensions: 158593
Number of successful extensions: 527
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 521
Number of HSP's successfully gapped: 11
Length of query: 330
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 231
Effective length of database: 8,392,385
Effective search space: 1938640935
Effective search space used: 1938640935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)