BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0773000 Os03g0773000|AK100695
(444 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10020.1 | chr1:3269939-3271732 REVERSE LENGTH=462 391 e-109
AT3G19680.1 | chr3:6840448-6842107 FORWARD LENGTH=492 348 4e-96
AT4G29310.1 | chr4:14437892-14439609 REVERSE LENGTH=425 342 3e-94
AT1G50040.1 | chr1:18542236-18543823 FORWARD LENGTH=461 300 1e-81
AT5G17640.1 | chr5:5811047-5812429 REVERSE LENGTH=433 242 3e-64
>AT1G10020.1 | chr1:3269939-3271732 REVERSE LENGTH=462
Length = 461
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/474 (46%), Positives = 284/474 (59%), Gaps = 54/474 (11%)
Query: 1 MDPCPFVRVLVGNLALRMXXXXXXXXXXXXXHPSTAPCYCKIRLGRMPWQVAAAPLVVAD 60
MDPCPF+R+ +GNLAL++ S++PC+CKI+L P Q AA P + +
Sbjct: 1 MDPCPFIRLTIGNLALKVPLAAKTTSSVVHP--SSSPCFCKIKLKNFPPQTAAIPYIPLE 58
Query: 61 GGEQAPSGALAAAFHLSKADLEWFARKPXXXXXXXXXXRGPATLKVAVYAGRKGTTCGVS 120
+ LAA FHLS +D++ A + LK+ +Y GR G CGV
Sbjct: 59 TTQFPEIQTLAATFHLSSSDIQRLASRSIFTSK--------PCLKILIYTGRAGAACGVH 110
Query: 121 SGRLIGKATIPVDLKGAEAKAAVVHSGWICVXXXXXXXXXXXXXELSLTVRAEPDPRFVF 180
SGRL+ K ++P+DL G ++K V H+GWI V + L V+AEPDPRFVF
Sbjct: 111 SGRLLAKVSVPLDLSGTQSKPCVFHNGWISVGKGAGKSSSSA--QFHLNVKAEPDPRFVF 168
Query: 181 EFDGEPECSPQVLQVRGSMKQPMFTCKFGCRSNSD-------------LRRSVVQTERDA 227
+FDGEPECSPQV+Q++G+++QP+FTCKF CR D + RS + +
Sbjct: 169 QFDGEPECSPQVVQIQGNIRQPVFTCKFSCRHTGDRTQRSRSLPTETSVSRSWLNSFGSE 228
Query: 228 AAAAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSRSNPGAWLILRPAGDGSW 287
GKERKGWS+TVHDLSGSPVA+AS+VTPFVASPGTDRVSRSNPG+WLILRP GD +W
Sbjct: 229 RERPGKERKGWSITVHDLSGSPVAMASIVTPFVASPGTDRVSRSNPGSWLILRP-GDCTW 287
Query: 288 EPWGRLECWRERGGAGASNSLGYRFDLLLPGVDHA-VPLAESSIAASKGGKFAIDL---- 342
PWGRLE WRERG GA++ LGYRF+L+ G A + LAES+I++ +GGKF+I+L
Sbjct: 288 RPWGRLEAWRERG--GATDGLGYRFELIPDGSSGAGIVLAESTISSHRGGKFSIELGSSP 345
Query: 343 ----------------TSMQPQSRGGTPGCSPR-GSGDFSQ--WPLASYSYRGFVMSSSV 383
G +P SPR GSGD+ WP Y+GFVMS+SV
Sbjct: 346 SSSSPTSVVNRSRSRRGGSSGSGGGASPANSPRGGSGDYGYGLWPWN--VYKGFVMSASV 403
Query: 384 QGEGRCSKPTVEVGVPHVGCXXXXXXXXXXXXXXXXSMDACRLFSHKLRKELSH 437
+GEG+CSKP VEV V HV C SMDACRLF+ ++RKEL H
Sbjct: 404 EGEGKCSKPCVEVSVQHVSCMEDAAAYVALSAAIDLSMDACRLFNQRMRKELCH 457
>AT3G19680.1 | chr3:6840448-6842107 FORWARD LENGTH=492
Length = 491
Score = 348 bits (892), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 216/498 (43%), Positives = 274/498 (55%), Gaps = 79/498 (15%)
Query: 1 MDPCPFVRVLVGNLALRMXXXXXXXXXXXXX-----HPSTAPCYCKIRLGRMPWQVAAAP 55
MDPC FVR++VGNLA+R +P+ CYCKIR P ++ + P
Sbjct: 1 MDPCSFVRIIVGNLAVRFPSSSSSSSSSSGPSVSGINPTAPNCYCKIRFKNFPREIVSVP 60
Query: 56 LVVADGGEQ----APSG---ALAAAFHLSKADLEWFARKPXXXXXXXXXXRGPATLKVAV 108
++ E + SG +AA F LSKA +E +KP + L V
Sbjct: 61 VMFRTESESETRCSSSGNVSTVAACFSLSKAQIEASLKKPKF-----------SVLSVEA 109
Query: 109 YA--------GRKGTTCGVSSG--RLIGKATIPVDLKGAEAKAAVVHSGWICVXXXXXXX 158
Y+ G G +CG+++ +L+G+ + +DLK AE K+ + H+GW+ +
Sbjct: 110 YSRGNSDGDDGVSGASCGLATAGEKLLGRFEVSLDLKSAETKSFLAHNGWVALPSKKTKS 169
Query: 159 XXXXXXELSLTVRAEPDPRFVFEFDGEPECSPQVLQVRGSMKQPMFTCKFGCR-SNSDLR 217
EL ++VR EPDPRFVF+FDGEPECSPQV QV+G+ KQ +FTCKFG R SNS R
Sbjct: 170 KTGSDPELHVSVRVEPDPRFVFQFDGEPECSPQVFQVQGNTKQAVFTCKFGSRNSNSGDR 229
Query: 218 ---------------RSVVQTERDAAAAAGKERKGWSVTVHDLSGSPVALASMVTPFVAS 262
RS + + KERKGWS+TVHDLSGSPVA+ASMVTPFV S
Sbjct: 230 NLLHSSSMMSEISSTRSCISSMNSEKEQPSKERKGWSITVHDLSGSPVAMASMVTPFVPS 289
Query: 263 PGTDRVSRSNPGAWLILRPAGDGSWEPWGRLECWRERGGAGASNSLGYRFDLLLPGVDHA 322
PG++RV+RS+PGAWLILRP G +W+PWGRLE WRE AG S++LGYRF+L G+ A
Sbjct: 290 PGSNRVTRSSPGAWLILRPDG-CTWKPWGRLEAWRE---AGYSDTLGYRFELFQDGIATA 345
Query: 323 VPLAESSIAASKGGKFAIDLTSMQP-------------------QSRGGTPGCSP-RGSG 362
V A SSI+ GG F ID+T S G P P GSG
Sbjct: 346 VS-ASSSISLKNGGSFVIDVTGGTSTTASTPTTSPQGSWDLGSGSSAGSRPASRPGSGSG 404
Query: 363 -DFS----QWPLASYSYRGFVMSSSVQGEGRCSKPTVEVGVPHVGCXXXXXXXXXXXXXX 417
DF Q P A+ RGFVMS++V+G G+ SKP VEVGV HV C
Sbjct: 405 SDFGYLLPQHPSAAAQNRGFVMSATVEGVGKRSKPEVEVGVTHVTCTEDAAAHVALAAAV 464
Query: 418 XXSMDACRLFSHKLRKEL 435
S+DACRLFSHKLRKEL
Sbjct: 465 DLSLDACRLFSHKLRKEL 482
>AT4G29310.1 | chr4:14437892-14439609 REVERSE LENGTH=425
Length = 424
Score = 342 bits (876), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/456 (43%), Positives = 253/456 (55%), Gaps = 58/456 (12%)
Query: 1 MDPCPFVRVLVGNLALRMXXXXXXXXXXXXXHPSTAPCYCKIRLGRMPWQVAAAPLV-VA 59
MDPCPFVR+ + +LALR+ HPS+ PCYCK+R+ P Q A PL +
Sbjct: 1 MDPCPFVRLTIDSLALRLPETATNKQIGGEVHPSSTPCYCKLRIKHFPSQKALLPLSSFS 60
Query: 60 DGGEQAPSGALAAAFHLSKADLEWFARKPXXXXXXXXXXRGPATLKVAVYAGRKGTTCGV 119
D S A FHL + + K +L+V+VYAGR G TCGV
Sbjct: 61 DASSPPESSTSAPGFHLDADAIRRISGKK-------------ISLRVSVYAGRTGHTCGV 107
Query: 120 SSGRLIGKATIPVDLKGAEAKAAVVHSGWICVXXXXXXXXXXXXXELSLTVRAEPDPRFV 179
+SG+L+GK + VDL A ++ H+GW L L V AEPDPRFV
Sbjct: 108 ASGKLLGKVEVAVDLAAALSRTVAFHNGW----KKLGGDGDKPSARLHLLVCAEPDPRFV 163
Query: 180 FEFDGEPECSPQVLQVRGSMKQPMFTCKFGCRSNSDLR---------------RSVVQTE 224
F+F GEPECSP V Q++ ++KQP+F+CKF N R R++ +
Sbjct: 164 FQFGGEPECSPVVYQIQDNLKQPVFSCKFSSDRNGRSRSLPSGFTYSSRGWITRTLSGDQ 223
Query: 225 RDAAAAAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSRSNPGAWLILRPAGD 284
+ A +ERKGW +T+HDLSGSPVA ASM+TPFVASPG+DRVSRSNPGAWLILRP G
Sbjct: 224 WEKKQA--RERKGWMITIHDLSGSPVAAASMITPFVASPGSDRVSRSNPGAWLILRPHGT 281
Query: 285 --GSWEPWGRLECWRERGGAGASNSLGYRFDLLLPG-VDHAVPLAESSIAASKGGKFAID 341
SW+PWGRLE WRER GA + LGY+F+L+ +P+AE +++ +GGKF+ID
Sbjct: 282 CVSSWKPWGRLEAWRER---GAIDGLGYKFELVRDNSTSTGIPIAEGTMSTKQGGKFSID 338
Query: 342 LTSMQPQSRGGTPGCSPRGSGDFSQWPLASYSYRGFVMSSSVQGEGRCSKPTVEVGVPHV 401
R SG + P S +GFVM SSV+GEG+ SKP V VG HV
Sbjct: 339 R----------------RVSGQ-GESPAISSPVKGFVMGSSVEGEGKVSKPVVHVGAQHV 381
Query: 402 GCXXXXXXXXXXXXXXXXSMDACRLFSHKLRKELSH 437
C S+DAC+LFS KLRKEL H
Sbjct: 382 TCMADAALFVALSAAVDLSVDACQLFSRKLRKELCH 417
>AT1G50040.1 | chr1:18542236-18543823 FORWARD LENGTH=461
Length = 460
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/468 (41%), Positives = 254/468 (54%), Gaps = 50/468 (10%)
Query: 1 MDPCPFVRVLVGNLALRM------XXXXXXXXXXXXXHPSTAPCYCKIRLGRMPWQVAAA 54
MDPC FVR++VGNLA+R S+ CYCKI+ P Q+ +
Sbjct: 1 MDPCSFVRIIVGNLAVRFPRSPSSSSSSSSSSGPSVSDVSSGNCYCKIKFKSFPRQIVSV 60
Query: 55 PLVVADGGEQAPS------GALAAAFHLSKADLEWFARKPXXXXXXXXXXRGPATLKVAV 108
P+++ E +AA F LSK+ +E +K + L V V
Sbjct: 61 PVLLRTESESESRCCSGNVSTVAACFSLSKSQIETSLKKAKW-----------SVLSVEV 109
Query: 109 YAGRKGTTCGV---SSGRLIGKATIPVDLKGAEAKAAVVHSGWICVXXXXXXXXXXXXX- 164
Y+ R+ +CG S +LIG+ + +DLK AE+K + H+GW+ +
Sbjct: 110 YS-RRSASCGFVAASGEKLIGRFQVTLDLKAAESKTCLAHNGWVDLGTKSKNNKKSGSDP 168
Query: 165 ELSLTVRAEPDPRFVFEFDGEPECSPQVLQVRGSMKQPMFTCKFGCRSNSDLRRSVVQTE 224
EL ++VR EPD RFVF+FDGEPECSPQV QV+G+ KQ +FTCKFG R++ D S+ +
Sbjct: 169 ELHVSVRVEPDTRFVFQFDGEPECSPQVFQVQGNAKQAVFTCKFGFRNSGDRNLSLSLSS 228
Query: 225 RDAAAAA-GKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSRSNPGAWLILRPAG 283
+ KERKGWS+T+HDLSGSPVA+ASMVTPFV SPG++RVSRS+PGAWLILRP G
Sbjct: 229 VTSGKEQFSKERKGWSITIHDLSGSPVAMASMVTPFVPSPGSNRVSRSSPGAWLILRPDG 288
Query: 284 DGSWEPWGRLECWRERGGAGASNSLGYRFDLLLPGVDHAVPLAESSIAASKGGKFAID-- 341
+W+PW RL+ WRE G S+ LGYRF+L G+ A SSI+ GG F ID
Sbjct: 289 -YTWKPWVRLQAWRE---PGVSDVLGYRFELYKDGI-AVAVSASSSISTKLGGSFIIDGS 343
Query: 342 ----LTSMQPQSRGG---------TPGCSPRGSGDFSQWPLASYSYR-GFVMSSSVQGEG 387
T+ S G + GSG ++ L+ GFVMS+ VQG
Sbjct: 344 TSTTTTASWSSSEGSFDLSSWSSIRSSRTDSGSGSDFRFSLSQAQQNLGFVMSTRVQGVE 403
Query: 388 RCSKPTVEVGVPHVGCXXXXXXXXXXXXXXXXSMDACRLFSHKLRKEL 435
+ SKP VEVGV HV C SMDACRLFS KLR EL
Sbjct: 404 KQSKPKVEVGVKHVTCTEDAAAHVALAAAVDLSMDACRLFSQKLRNEL 451
>AT5G17640.1 | chr5:5811047-5812429 REVERSE LENGTH=433
Length = 432
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 236/440 (53%), Gaps = 38/440 (8%)
Query: 1 MDPCPFVRVLVGNLALRMXXXXXXXXXXXXXHPS-TAPCYCKIRLGRMPWQVAAAPLVVA 59
MDP F+R+ VG+LALR+ + ++ C C+I+L P Q + PL+ +
Sbjct: 1 MDPQAFIRLSVGSLALRIPKVLINSTSKSNEKKNFSSQCSCEIKLRGFPVQTTSIPLMPS 60
Query: 60 DGGEQAPSG-ALAAAFHLSKADLEWFARKPXXXXXXXXXXRGPATLKVAVYAGRKGTTCG 118
+ AP +++ +F+L ++DL A L+++V+ G+K CG
Sbjct: 61 --LDAAPDHHSISTSFYLEESDLR-------ALLTPGCFYSPHAHLEISVFTGKKSLNCG 111
Query: 119 VSSGRL-IGKATIPVDLKGAEAKAAVVHSGWICVXXXXXXXXXXXXXELSLTVRAEPDPR 177
V R IG + V + E K ++ +GWI + EL L V+ +PDPR
Sbjct: 112 VGGKRQQIGMFKLEVGPEWGEGKPMILFNGWISIGKTKRDGAA----ELHLKVKLDPDPR 167
Query: 178 FVFEFDGEPECSPQVLQVRGSMKQPMFTCKFGCRSNSDLRRSVVQTERDAAAAAG----- 232
+VF+F+ SPQ++Q+RGS+KQP+F+CKF S R S V +++G
Sbjct: 168 YVFQFEDVTTLSPQIVQLRGSVKQPIFSCKF-----SRDRVSQVDPLNGYWSSSGDGTEL 222
Query: 233 ----KERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSRSNPGAWLILR--PAGDGS 286
+ERKGW V +HDLSGS VA A + TPFV S G D V++SNPGAWL++R P+ S
Sbjct: 223 ESERRERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVAKSNPGAWLVVRPDPSRPNS 282
Query: 287 WEPWGRLECWRERGGAGASNSLGYRFDLLLPGVDHA-VPLAESSIAASKGGKFAIDLTSM 345
W+PWG+LE WRER G +S+ RF LL G++ V ++E I+A KGG+F ID T
Sbjct: 283 WQPWGKLEAWRER---GIRDSVCCRFHLLSNGLEVGDVLMSEILISAEKGGEFLID-TDK 338
Query: 346 QPQSRGGTPGCSPRGSGDFSQWPLASYSYRGFVMSSSVQGEGRCSKPTVEVGVPHVGCXX 405
Q + TP SP+ SGDFS S GFVMSS VQGEG+ SKP V++ + HV C
Sbjct: 339 QMLTVAATPIPSPQSSGDFSGLG-QCVSGGGFVMSSRVQGEGKSSKPVVQLAMRHVTCVE 397
Query: 406 XXXXXXXXXXXXXXSMDACR 425
S+ AC+
Sbjct: 398 DAAIFMALAAAVDLSILACK 417
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,757,957
Number of extensions: 347199
Number of successful extensions: 647
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 604
Number of HSP's successfully gapped: 5
Length of query: 444
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 342
Effective length of database: 8,310,137
Effective search space: 2842066854
Effective search space used: 2842066854
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)