BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0759700 Os03g0759700|AK072833
(317 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19500.1 | chr3:6759289-6760893 REVERSE LENGTH=271 99 2e-21
AT1G49830.1 | chr1:18445111-18446659 REVERSE LENGTH=251 95 6e-20
AT1G27660.1 | chr1:9621701-9625666 FORWARD LENGTH=454 86 2e-17
AT1G61660.1 | chr1:22754003-22756171 REVERSE LENGTH=394 85 5e-17
AT3G20640.1 | chr3:7210654-7213199 REVERSE LENGTH=455 84 7e-17
AT4G21340.1 | chr4:11353064-11354628 FORWARD LENGTH=302 83 2e-16
AT2G20100.1 | chr2:8678185-8681809 FORWARD LENGTH=363 82 3e-16
AT2G31730.1 | chr2:13487783-13488593 REVERSE LENGTH=154 82 4e-16
AT4G29100.1 | chr4:14341140-14344575 FORWARD LENGTH=408 81 8e-16
AT1G31050.1 | chr1:11075720-11079140 REVERSE LENGTH=435 81 9e-16
AT4G05170.1 | chr4:2667990-2669187 REVERSE LENGTH=239 77 1e-14
AT1G05710.2 | chr1:1716198-1717023 FORWARD LENGTH=172 70 2e-12
>AT3G19500.1 | chr3:6759289-6760893 REVERSE LENGTH=271
Length = 270
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 63/106 (59%), Gaps = 15/106 (14%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I ALQQLVSP+GK+D ASVLHEA+GYI+FL DQ+QVL SPYL + G
Sbjct: 164 IAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYL--------INHSLDGGVV 215
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCTEHVXXXXXXXXXXXXXDLWS 274
+ A++ DLRSRGLCLVP+S T HV D WS
Sbjct: 216 TGDVMAAMKAKDLRSRGLCLVPVSSTVHV-------ENSNGADFWS 254
>AT1G49830.1 | chr1:18445111-18446659 REVERSE LENGTH=251
Length = 250
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 16/106 (15%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I LQ LVSP+GK+D ASVLHE +GYI+FL DQVQVLS+PY + P + +++ G
Sbjct: 134 ITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQVQVLSTPYFKHNP----LDDEDTG--- 186
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCTEHVXXXXXXXXXXXXXDLWS 274
E P ++ +LRS GLCLVP++ T HV DLWS
Sbjct: 187 --EVNPTMKVKELRSNGLCLVPLAWTVHV-------ANTNGADLWS 223
>AT1G27660.1 | chr1:9621701-9625666 FORWARD LENGTH=454
Length = 453
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I ALQQLVSPFGK+DTASVL EA+GYI+FL Q++ LS PY++ S P + +
Sbjct: 342 IAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMR---ASRNRPGKASQLVS 398
Query: 229 AEEQPPALRPSDLRSRGLCLVPISC 253
++ DLRSRGLCLVP+SC
Sbjct: 399 QSQEGDEEETRDLRSRGLCLVPLSC 423
>AT1G61660.1 | chr1:22754003-22756171 REVERSE LENGTH=394
Length = 393
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I +LQQLVSPFGK+DTASVL EA+ YI+FLHDQV VLS+PY+++ + + + + +
Sbjct: 290 ITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKS 349
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCT 254
+E +LR GLCLVPIS T
Sbjct: 350 QDEN----ENHELRGHGLCLVPISST 371
>AT3G20640.1 | chr3:7210654-7213199 REVERSE LENGTH=455
Length = 454
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I ALQQLVSPFGK+D ASVL EA+ YI+FLH QV LS+PY+ + S + + + T
Sbjct: 354 IAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYM-KSGASLQHQQSDHSTEL 412
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCT 254
+ P DLRSRGLCLVP+S T
Sbjct: 413 EVSEEP-----DLRSRGLCLVPVSST 433
>AT4G21340.1 | chr4:11353064-11354628 FORWARD LENGTH=302
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQV--QVLSSPYLQRLPPSARVPEQERGT 226
I ALQQLVSPFGK+DTASVLH+A+ YI+FL +Q+ +V +SP+L + + ++ +
Sbjct: 200 ITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSS 259
Query: 227 PAAEEQPPALRPSDLRSRGLCLVPISCT 254
Q + R DLRSRGLCL+PIS T
Sbjct: 260 NNTHNQNCSPR-QDLRSRGLCLMPISST 286
>AT2G20100.1 | chr2:8678185-8681809 FORWARD LENGTH=363
Length = 362
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 63/116 (54%), Gaps = 27/116 (23%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYL-------------QR--- 212
I +L QLVSPFGK+DTASVL EA+GYIRFLH Q++ LS PY QR
Sbjct: 229 IASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMN 288
Query: 213 --LP--PSARVPE--QERGTPAAEEQPPALRPS-----DLRSRGLCLVPISCTEHV 257
P P V E +RG + P+ DLRSRGLCLVPISCT V
Sbjct: 289 GIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQV 344
>AT2G31730.1 | chr2:13487783-13488593 REVERSE LENGTH=154
Length = 153
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 15/89 (16%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I ALQQLVSP+GK+DTASVL E + YI+FL +QV+VLS+PYLQ TP+
Sbjct: 49 ISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQ-------------ATPS 95
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCTEHV 257
E+ + LRS+GLCLVP+ T V
Sbjct: 96 TTEEE--VEEYSLRSKGLCLVPLEYTSEV 122
>AT4G29100.1 | chr4:14341140-14344575 FORWARD LENGTH=408
Length = 407
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 64/116 (55%), Gaps = 27/116 (23%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYL-----------QRL---- 213
I AL QLVSPFGK+DTASVL EA+GYIRFL Q++ LS PY Q L
Sbjct: 273 IAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDR 332
Query: 214 ------PPSARVPEQ---ERG--TPAAEEQPPALRP-SDLRSRGLCLVPISCTEHV 257
P V +Q RG + + + Q + P DLRSRGLCLVPISCT V
Sbjct: 333 SCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQV 388
>AT1G31050.1 | chr1:11075720-11079140 REVERSE LENGTH=435
Length = 434
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSPYLQRLPPSARVPEQERGTPA 228
I LQQ+VSPFGK+DTASVL EA+ YI F +QV++LS+PY++ ++ + + G
Sbjct: 330 ITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMK----NSSMKDPWGGWDR 385
Query: 229 AEEQPPALRPSDLRSRGLCLVPISCT 254
+ + DLRSRGLCLVPIS T
Sbjct: 386 EDHNKRGPKHLDLRSRGLCLVPISYT 411
>AT4G05170.1 | chr4:2667990-2669187 REVERSE LENGTH=239
Length = 238
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQVQVLSSP------YLQRLPPSARVPEQ 222
I ALQQLVSPFGK+DTASVL+EA+ YI+FL +QV VLS+P +Q+ S +
Sbjct: 123 ITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQCSNKKSIN 182
Query: 223 ERGTPAAEEQPPALRPSDLRSRGLCLVPI 251
+G +E P R DL SRGLCL+PI
Sbjct: 183 TQGEVEEDECSPR-RYVDLSSRGLCLMPI 210
>AT1G05710.2 | chr1:1716198-1717023 FORWARD LENGTH=172
Length = 171
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 37/108 (34%)
Query: 169 IIALQQLVSPFGKSDTASVLHEALGYIRFLHDQ----------------------VQVLS 206
I ALQQ+VSP+GK+DTASVL +A+ YI FLH+Q VQVLS
Sbjct: 47 ISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVCSSIPSMIHSSLSEFPCSFVQVLS 106
Query: 207 SPYLQRLPPSARVPEQERGTPAAEEQPPALRPSDLRSRGLCLVPISCT 254
+PYLQ +P A +E+ L LR+RGLCLVP+ T
Sbjct: 107 APYLQTVP------------DATQEE---LEQYSLRNRGLCLVPMENT 139
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,346,405
Number of extensions: 128433
Number of successful extensions: 423
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 413
Number of HSP's successfully gapped: 12
Length of query: 317
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 218
Effective length of database: 8,392,385
Effective search space: 1829539930
Effective search space used: 1829539930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)