BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0748900 Os03g0748900|AK061165
(278 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G32450.1 | chr5:12079707-12081317 FORWARD LENGTH=268 322 1e-88
AT4G17720.1 | chr4:9862660-9864498 REVERSE LENGTH=314 210 6e-55
AT5G46870.1 | chr5:19015486-19016990 FORWARD LENGTH=296 206 8e-54
AT5G16840.2 | chr5:5536042-5538026 FORWARD LENGTH=261 190 8e-49
AT1G67950.3 | chr1:25478884-25480420 REVERSE LENGTH=280 175 2e-44
AT1G14340.1 | chr1:4897709-4898776 FORWARD LENGTH=245 127 5e-30
AT3G01210.1 | chr3:72182-73159 FORWARD LENGTH=250 104 6e-23
>AT5G32450.1 | chr5:12079707-12081317 FORWARD LENGTH=268
Length = 267
Score = 322 bits (826), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/269 (60%), Positives = 207/269 (76%), Gaps = 11/269 (4%)
Query: 6 RAVRTVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIAL 65
+ R+V+V N+SDLA ERE+ EFFSFSG+IEH++I+ + R A+VTF DPKALEIAL
Sbjct: 2 QTTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKE-FGQSRIAFVTFTDPKALEIAL 60
Query: 66 LLSGATIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTT 125
LLSGATIVD++V IT AE+Y+ T + A L + T +
Sbjct: 61 LLSGATIVDQIVTITRAENYVQRRETQE--------VRMLDNAMPLGLQESTTQTKTNMD 112
Query: 126 G--RVYVSKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISE 183
G R YVSKA DV+ TV+A+GSA+ QDAVNKAKAFDEKHQLRANASAK++SFDKRVG++E
Sbjct: 113 GNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTE 172
Query: 184 KINSGITVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGA 243
K++ GI+ VNEKVKSVDQ+L VSDKTMAA+ AAERKLNDTGSAVK++RYV+AG +W +GA
Sbjct: 173 KLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGA 232
Query: 244 FSKVAKAGHVAGSRTREKFQIAVSNLTAK 272
FSKVA+ G VAGS+T+EKF +AVSN+++K
Sbjct: 233 FSKVARVGQVAGSKTKEKFNLAVSNMSSK 261
>AT4G17720.1 | chr4:9862660-9864498 REVERSE LENGTH=314
Length = 313
Score = 210 bits (535), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 166/256 (64%), Gaps = 20/256 (7%)
Query: 10 TVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIALLLSG 69
TV+V N+S A +R+++EFFSFSG+I +++ + + T + AYVTFKD + E A+LLSG
Sbjct: 5 TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERT-KLAYVTFKDLQGAETAVLLSG 63
Query: 70 ATIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTGRVY 129
ATIVD V ++ A DY P L +P ++N SP G
Sbjct: 64 ATIVDSSVIVSMAPDYQLSPEALASL-------------------EPKDSNKSPKAGDSV 104
Query: 130 VSKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISEKINSGI 189
+ KA DV+++++A+G + +DA+ KAK+ DEKHQL + ASAK+ SFDK++G ++KIN+G
Sbjct: 105 LRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGT 164
Query: 190 TVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGAFSKVAK 249
VV EKV+ VDQ+ VS+KT +A+ AAE+ +++ GSA+ NRYV G +W+ GAF+KVAK
Sbjct: 165 VVVGEKVREVDQKYQVSEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAK 224
Query: 250 AGHVAGSRTREKFQIA 265
A G + +EK +A
Sbjct: 225 AAEEVGQKAKEKVGMA 240
>AT5G46870.1 | chr5:19015486-19016990 FORWARD LENGTH=296
Length = 295
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 168/259 (64%), Gaps = 22/259 (8%)
Query: 10 TVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIALLLSG 69
TV+V N+S A ER+++EFFSFSG+I +++ + + + + AYVTFKD + E A+LL+G
Sbjct: 5 TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGS-KLAYVTFKDLQGAETAVLLTG 63
Query: 70 ATIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTGRVY 129
+TIVD V +T + DY P A ++ E+N S + R
Sbjct: 64 STIVDSSVTVTMSPDYQLPP------------------DALASIESLKESNKSSSPTRED 105
Query: 130 VS---KAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISEKIN 186
VS KA DV++ +I++G + +DA+ KAK+ DEKHQL + ASA++ SFDKR+G +EKIN
Sbjct: 106 VSVFRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKIN 165
Query: 187 SGITVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGAFSK 246
+G TVV+EKVK VDQ+ V++KT +A+ AAE+ +++ GSA+ NRYV G +W+ GAF++
Sbjct: 166 TGTTVVSEKVKEVDQKFQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNR 225
Query: 247 VAKAGHVAGSRTREKFQIA 265
V+KA G + +EK +A
Sbjct: 226 VSKAAEEVGQKAKEKVGLA 244
>AT5G16840.2 | chr5:5536042-5538026 FORWARD LENGTH=261
Length = 260
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 162/256 (63%), Gaps = 29/256 (11%)
Query: 8 VRTVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIALLL 67
VR+V+V N+S A E +++EFFSFSGE+E +DI+ + +AYVTFK+ + E A+LL
Sbjct: 5 VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQS---SNEHSAYVTFKETQGAETAVLL 61
Query: 68 SGATIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTGR 127
SGA+I D+ V I A +Y AP+A+ T+++ + +
Sbjct: 62 SGASIADQSVIIELAPNY------------------SPPAAPHAE----TQSSGAESV-- 97
Query: 128 VYVSKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISEKINS 187
V KA DV+++++A+G + +DAV KAKAFDEKH + A+A + S D+++G+S+K+ +
Sbjct: 98 --VQKAEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTA 155
Query: 188 GITVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGAFSKV 247
G ++VNEK+K+VDQ V+++T + AAE+ ++ GSAV NRYV G SW GAF++V
Sbjct: 156 GTSLVNEKIKAVDQNFQVTERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRV 215
Query: 248 AKAGHVAGSRTREKFQ 263
A+A G +T+EK +
Sbjct: 216 AQAAGEVGQKTKEKVE 231
>AT1G67950.3 | chr1:25478884-25480420 REVERSE LENGTH=280
Length = 279
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 148/247 (59%), Gaps = 33/247 (13%)
Query: 8 VRTVRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIALLL 67
V+TV++ N+S + +++V+EFFSFSG+I++V++R + + AYVTFKD + E A+LL
Sbjct: 28 VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSE-TQESQVAYVTFKDSQGAETAMLL 86
Query: 68 SGATIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTGR 127
+GA I D V+ITPA +Y QL P EA A +
Sbjct: 87 TGAVIADLRVSITPAVNY--------QL--------------------PPEALALDSQEH 118
Query: 128 VY----VSKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISE 183
+ V KA DV+ ++ RG A+ +DA+ KAKAFD++H L +NASA I S D ++G+SE
Sbjct: 119 SFNGFSVKKAEDVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATIASLDDKMGLSE 178
Query: 184 KINSGITVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGA 243
K++ G TVVNEK++ +D+R V + T +AL AAE +A+ N YVS+G SW + A
Sbjct: 179 KLSIGTTVVNEKLRDIDERYQVREITKSALAAAEETAISARTALMANPYVSSGASWFSNA 238
Query: 244 FSKVAKA 250
F V KA
Sbjct: 239 FGAVTKA 245
>AT1G14340.1 | chr1:4897709-4898776 FORWARD LENGTH=245
Length = 244
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 136/251 (54%), Gaps = 23/251 (9%)
Query: 11 VRVRNISDLAGEREVREFFSFSGEIEHVDIRCDGVATGRTAYVTFKDPKALEIALLLSGA 70
V V +S ++ +FFSFSG I+ +DI G TAYV FKD + E A+LL+GA
Sbjct: 9 VEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSG-EQACTAYVMFKDSYSQETAVLLTGA 67
Query: 71 TIVDRVVNIT----PAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTG 126
TI+D+ V IT E++ + T + + + Q +E NA
Sbjct: 68 TILDQRVCITRWGQHHEEFDFWNATSRGFEDE---------SDSQHYAQRSEFNAGEA-- 116
Query: 127 RVYVSKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISEKIN 186
V+KA +V+ ++A G + +DA++KAKAFDE H + A A A+++ ++R+G+++KI
Sbjct: 117 ---VTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIF 173
Query: 187 SGITVVNEKVKSVDQRLHVSDKTMAALLAAERKLNDTGSAVKTNRYVSAGTSWLNGAFSK 246
+G+ E V+ DQR HVSD +A+ A R ++V + Y S+G WL+GA +
Sbjct: 174 TGL----EAVRMTDQRYHVSDTAKSAVFATGRTAAAAATSVVNSSYFSSGALWLSGALER 229
Query: 247 VAKAGHVAGSR 257
AKA G+R
Sbjct: 230 AAKAASDLGTR 240
>AT3G01210.1 | chr3:72182-73159 FORWARD LENGTH=250
Length = 249
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 33/257 (12%)
Query: 12 RVRNISDLAGEREVREFFSFSGEIEHVDIR-CDGVATGRTAYVTFKDPKALEIALLLSGA 70
+V N+S A E++V FFS G +E V+I C G A TAYVTF+D AL++A+LLSGA
Sbjct: 9 QVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDAL--TAYVTFRDAYALDMAVLLSGA 66
Query: 71 TIVDRVVNITPAEDYIYIPVTDQQLXXXXXXXXXXXXAPNADLDQPTEANASPTTGRVYV 130
TIVD+ V I+ Y++ +Q +A P EA +
Sbjct: 67 TIVDQTVWISVYGVYLHESNNLRQ----EEDYSVTVTRSDAFASSPGEA----------I 112
Query: 131 SKAHDVMTTVIARGSAMRQDAVNKAKAFDEKHQLRANASAKINSFDKRVGISEKINSGIT 190
+ A V+ T++A+G + +DA+ KAKA DE + + + K+ +G+++ I S +
Sbjct: 113 TVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSM- 171
Query: 191 VVNEKVKSVDQRLHVSDKTMAALL-----------AAERKLNDTGSAVKTNRYVSAGTSW 239
E V+S D++ H SD T +A+L + ++V +RY + G W
Sbjct: 172 ---ELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALW 228
Query: 240 LNGAFSK-VAKAGHVAG 255
+ A + A H+ G
Sbjct: 229 FSDALGRAAKAAAHIGG 245
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.128 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,872,277
Number of extensions: 172699
Number of successful extensions: 567
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 555
Number of HSP's successfully gapped: 7
Length of query: 278
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 181
Effective length of database: 8,447,217
Effective search space: 1528946277
Effective search space used: 1528946277
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)